Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40109
         (825 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcript...    26   1.6  
AF510719-1|AAP47148.1|  591|Anopheles gambiae ammonium transport...    24   6.5  
AF532982-1|AAQ10289.1|  459|Anopheles gambiae putative RNA methy...    23   8.6  

>AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1209

 Score = 25.8 bits (54), Expect = 1.6
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = -2

Query: 563  VEERLQLCSSGTTSAEVMGAQCPI 492
            VE+R + C+SG  S E + A CP+
Sbjct: 1013 VEDRCRKCNSGGESIEHVIAGCPV 1036


>AF510719-1|AAP47148.1|  591|Anopheles gambiae ammonium
           transport-like protein protein.
          Length = 591

 Score = 23.8 bits (49), Expect = 6.5
 Identities = 13/38 (34%), Positives = 17/38 (44%)
 Frame = -2

Query: 599 CYILHIL*ANLIVEERLQLCSSGTTSAEVMGAQCPIGS 486
           CY+ H   A LI      LC  G    + MG   P+G+
Sbjct: 317 CYLYHAWEAILIGAIGSALCCFGMPLFDRMGVDDPVGA 354


>AF532982-1|AAQ10289.1|  459|Anopheles gambiae putative RNA
           methylase protein.
          Length = 459

 Score = 23.4 bits (48), Expect = 8.6
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = +2

Query: 119 FEPYADNGGSIVAIAGDDYAVIGAD 193
           F+P+A +G  +VA A     V GAD
Sbjct: 222 FDPFAGSGSLLVAAAKFGAYVAGAD 246


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 880,378
Number of Sequences: 2352
Number of extensions: 18379
Number of successful extensions: 32
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 87734433
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)