Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40107
(819 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_01_0183 - 2652173-2653924 34 0.16
05_04_0228 - 19224901-19224991,19225095-19225219,19225293-192254... 33 0.21
07_03_0625 + 20054380-20054434,20054819-20054853,20055387-20055941 33 0.27
03_06_0135 + 31928838-31929698,31929783-31929932,31930795-319310... 32 0.48
08_01_1049 - 10627636-10628041,10630972-10631115,10631205-106318... 31 0.83
07_03_0603 - 19890664-19890823,19891104-19891329,19891498-198916... 31 0.83
06_01_1057 + 8441881-8442278,8442464-8442548,8442637-8442867 31 1.1
01_06_0102 - 26447286-26448107,26448248-26448385,26448990-264493... 31 1.1
02_02_0063 + 6481568-6481570,6481922-6482470 31 1.5
12_01_1010 - 10280424-10282003,10283359-10283668,10283749-102839... 30 1.9
05_07_0200 - 28368890-28369021,28369169-28369303,28369918-283699... 30 1.9
04_04_0674 + 27173948-27174188,27174704-27175260,27175310-271753... 30 1.9
12_02_0810 - 23359541-23360018,23360108-23360237,23360366-233604... 30 2.5
10_08_0669 + 19742140-19742189,19742886-19742923,19744260-197444... 30 2.5
07_03_0698 - 20765305-20768526 30 2.5
06_03_0332 + 19652207-19652995 30 2.5
01_01_1093 + 8627731-8627889,8627934-8627996,8628671-8628721 30 2.5
12_02_0828 - 23502276-23503472,23503568-23504002,23504097-235042... 29 3.4
06_01_0016 + 184804-185025,185121-185237,185324-185737,185827-18... 29 3.4
02_05_0602 + 30283893-30284170,30286259-30286305,30286534-302875... 29 3.4
01_06_0629 + 30712268-30713023 29 3.4
11_06_0033 - 19437746-19437916,19438063-19438145,19438266-194383... 29 4.4
08_01_0996 + 10089800-10090149,10090426-10090483,10092922-100931... 29 4.4
07_03_0097 + 13372270-13372399,13372958-13373457 29 4.4
03_06_0416 - 33780911-33781861 29 4.4
03_01_0119 + 935554-937161 29 4.4
04_04_0648 - 26936123-26936447,26936540-26936841,26937043-269379... 29 5.9
03_02_0691 + 10432615-10433109,10433155-10433216,10433526-104335... 29 5.9
03_02_0538 + 9299639-9300046,9300362-9300509,9300648-9300652,930... 29 5.9
07_03_1086 + 23858419-23859423,23859527-23859610 28 7.8
07_03_0394 - 17633753-17636788 28 7.8
07_01_0183 + 1297445-1297796,1297896-1298424,1298548-1298630,129... 28 7.8
06_01_0931 + 7192519-7194075 28 7.8
04_03_0372 + 15068405-15070000 28 7.8
03_01_0069 + 549787-549791,550033-550303,550405-552201 28 7.8
>09_01_0183 - 2652173-2653924
Length = 583
Score = 33.9 bits (74), Expect = 0.16
Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Frame = +3
Query: 63 AVRLHYGLPVIVKLLQPPSRWPLVKAV-VGLVRNLALCSANYAPLREHGAVHHLVRLLMR 239
AV + G+P+++ +P S P+V+A+ V ++N+A + L E G + LV LL
Sbjct: 282 AVAAYGGVPILINACRPGSGSPVVQALAVAALKNVASIEDVRSALVEEGGLPILVDLLAS 341
Query: 240 AYNDTRDNAAL 272
D + +AL
Sbjct: 342 GTIDAQKGSAL 352
>05_04_0228 -
19224901-19224991,19225095-19225219,19225293-19225410,
19225554-19225618,19225760-19225839,19225942-19226005,
19227341-19227480,19227571-19227694,19227781-19227840,
19227922-19227990,19228139-19228288,19229182-19229289,
19229573-19229648,19229960-19230054,19231729-19231803,
19231923-19232043,19232136-19232308,19232647-19232813,
19232944-19233301
Length = 752
Score = 33.5 bits (73), Expect = 0.21
Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Frame = +2
Query: 314 MEEIVEGAVGALHILAKESHN-RQLIRQQNVIPIFVQLLFNEIENIQRVAAGVLCELAVE 490
+ ++ A A+ LA E+ N + +R + IP V+LL ++ +QR AAG L LA +
Sbjct: 207 VNSVIRRAADAITNLAHENSNIKTCVRIEGGIPPLVELLESQDLKVQRAAAGALRTLAFK 266
Query: 491 KE 496
+
Sbjct: 267 ND 268
>07_03_0625 + 20054380-20054434,20054819-20054853,20055387-20055941
Length = 214
Score = 33.1 bits (72), Expect = 0.27
Identities = 28/84 (33%), Positives = 35/84 (41%)
Frame = +2
Query: 62 CSAPALWIAGDREAATASFSLASSEGRRGLSTQPGALFRQLRSVAGTRRRSSSGAPADAC 241
C A IA R++++ S S SS G G T + RRSSS PA +
Sbjct: 99 CGASPRKIAALRKSSS-SLSTTSSGGGSGRRTDRVSAEESSACKTAACRRSSSTTPASSP 157
Query: 242 LQRHQRQRSSSGGGANTAYADGVR 313
+ RS GG A A A G R
Sbjct: 158 MLAADVDRSGGGGKAKKAAARGRR 181
>03_06_0135 +
31928838-31929698,31929783-31929932,31930795-31931065,
31931157-31931249,31931442-31931616,31931715-31931960,
31932100-31932294,31932604-31932802
Length = 729
Score = 32.3 bits (70), Expect = 0.48
Identities = 30/105 (28%), Positives = 47/105 (44%), Gaps = 1/105 (0%)
Frame = -1
Query: 378 LLWLSLAKICKAPTAPST-ISSIRTPSA*AVLAPPPEELRCLWCRCRHASAGAPDDERRR 202
++W SL+ PT+ S IS+ R+ A ++ PPP +A A R+
Sbjct: 45 IVWTSLS-----PTSSSQQISTERSSFAADIVDPPPASHN--HTATTTTAAAAAGGHRKP 97
Query: 201 VPATERSWRNRAPGCVLSPRRPSLEASEKEAVAASRSPAIHNAGA 67
P T RS + R P P RP+ AS ++ A+ A+ + A
Sbjct: 98 RPTTSRSHKKRHPPAGSHPHRPNATAS-PDSTPANADHAVQSKPA 141
>08_01_1049 -
10627636-10628041,10630972-10631115,10631205-10631869,
10632709-10633110
Length = 538
Score = 31.5 bits (68), Expect = 0.83
Identities = 21/61 (34%), Positives = 32/61 (52%)
Frame = -1
Query: 279 PPEELRCLWCRCRHASAGAPDDERRRVPATERSWRNRAPGCVLSPRRPSLEASEKEAVAA 100
PP++ R + R H +A + DDE + E + +PGC L P S EASE++ +
Sbjct: 274 PPQKTRFVKERVAHITASSGDDETLGLVNNE-IIESPSPGCKLEPGAVS-EASEQQLFCS 331
Query: 99 S 97
S
Sbjct: 332 S 332
>07_03_0603 - 19890664-19890823,19891104-19891329,19891498-19891636,
19891849-19891942,19892291-19892311,19892506-19892941,
19893133-19893280,19893369-19893476,19893543-19893659,
19893960-19894016,19894488-19894553,19895140-19895328,
19895410-19895523,19895684-19895766,19895857-19896322,
19896832-19897476
Length = 1022
Score = 31.5 bits (68), Expect = 0.83
Identities = 22/89 (24%), Positives = 48/89 (53%), Gaps = 2/89 (2%)
Frame = +2
Query: 305 GVRMEEIVEGAVGALHILAKESHNRQLIRQ--QNVIPIFVQLLFNEIENIQRVAAGVLCE 478
GV +E+++ + L +A+ + + ++ Q V +F +LL ++ E VA +L
Sbjct: 927 GVPDQEVLKQVLFTLRNIARFRNLQPVLANTPQAVEIVFQELLRSKTEGFF-VACDILKR 985
Query: 479 LAVEKEGAEMSKPKGQPLRSLNCCIQEMK 565
L +EG ++++ + +R L C +QE++
Sbjct: 986 LCESEEGHKIARALKRHIRRLGCLVQELE 1014
>06_01_1057 + 8441881-8442278,8442464-8442548,8442637-8442867
Length = 237
Score = 31.1 bits (67), Expect = 1.1
Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = +2
Query: 125 ASSEGRRGLSTQPGALFRQLR-SVAGTRRRSSSGAPADACLQRHQRQRSSSGGG 283
A++ GRRG QPG RQ R G RR++ G C +R + + GG
Sbjct: 4 AAAPGRRGRRRQPGCQIRQGREGRRGRRRQTDRGEGRCGCGRRREGKWPRPDGG 57
>01_06_0102 - 26447286-26448107,26448248-26448385,26448990-26449359,
26449505-26449606,26449696-26449788,26449934-26450181,
26451088-26451274,26451825-26452043,26452464-26452660,
26453545-26453875,26454099-26454457,26455141-26455240,
26455349-26455464,26455547-26455663,26455782-26455880,
26456057-26456131,26456205-26456286,26457724-26457763,
26458685-26458769,26458924-26459055
Length = 1303
Score = 31.1 bits (67), Expect = 1.1
Identities = 19/62 (30%), Positives = 28/62 (45%)
Frame = -1
Query: 234 SAGAPDDERRRVPATERSWRNRAPGCVLSPRRPSLEASEKEAVAASRSPAIHNAGALHSA 55
S APD+ + + + R APG V + P+ E AA+ + A NA A A
Sbjct: 1192 STAAPDNAEKTA-TPDNAERMAAPGNVEATTEPAAAPGNVEGTAAAATDATSNADATSGA 1250
Query: 54 PS 49
P+
Sbjct: 1251 PA 1252
>02_02_0063 + 6481568-6481570,6481922-6482470
Length = 183
Score = 30.7 bits (66), Expect = 1.5
Identities = 18/45 (40%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Frame = +2
Query: 137 GRRGLSTQPGALFRQLRSVAGTR--RRSSSGAPADACLQRHQRQR 265
GRR +T+PG L +V R RR +G PA A R +R+R
Sbjct: 132 GRRDAATRPGRLVAMAATVGSRREERRGPAGRPAPAEAVRTRRRR 176
>12_01_1010 -
10280424-10282003,10283359-10283668,10283749-10283939,
10283967-10284279
Length = 797
Score = 30.3 bits (65), Expect = 1.9
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = +3
Query: 153 VRNLALCSANYAPLREHGAVHHLVRLLMRAYNDTRDNAALRAVEPIL 293
+ NL C N + E+G + L+RLL+ +DT+ + A E +L
Sbjct: 243 LENLESCEKNVRQMAENGRLQPLLRLLLEGSSDTQLSMAAHLGELVL 289
>05_07_0200 -
28368890-28369021,28369169-28369303,28369918-28369947,
28370019-28370093,28370222-28370333,28370440-28370621,
28370723-28370854,28372193-28373479
Length = 694
Score = 30.3 bits (65), Expect = 1.9
Identities = 21/63 (33%), Positives = 28/63 (44%)
Frame = -1
Query: 348 KAPTAPSTISSIRTPSA*AVLAPPPEELRCLWCRCRHASAGAPDDERRRVPATERSWRNR 169
++P P T SS + P PPP L + HA+AG P+ RRR + S
Sbjct: 14 RSPATPKTSSSRKAP-------PPPPPL--VQAAAHHAAAGQPETPRRRSSGSPASASAS 64
Query: 168 APG 160
A G
Sbjct: 65 ASG 67
>04_04_0674 +
27173948-27174188,27174704-27175260,27175310-27175399,
27175475-27175714,27175801-27176022,27176124-27176433,
27176528-27176847,27176906-27177021,27177133-27177227,
27177331-27177407,27177520-27177615
Length = 787
Score = 30.3 bits (65), Expect = 1.9
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = -1
Query: 216 DERRRVPATERSWRNRAPGCVLSPRRPSLEASEKEAVAASRSPA 85
D RR+P ERS+ R P V R P E ++ + RS A
Sbjct: 536 DRVRRLPPPERSYDRRPPAPVYPKRSPRREYGRRDELPPPRSRA 579
>12_02_0810 -
23359541-23360018,23360108-23360237,23360366-23360496,
23360541-23360635,23362461-23362593,23363830-23364029
Length = 388
Score = 29.9 bits (64), Expect = 2.5
Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 4/58 (6%)
Frame = -1
Query: 240 HASAGAPDDERRRVP----ATERSWRNRAPGCVLSPRRPSLEASEKEAVAASRSPAIH 79
H S DD+R+ + AT R R+R G PR+ +E+S +A ++ A H
Sbjct: 31 HTSRRGADDDRQILKLVHAATARGRRSRGRGSTSPPRKGGMESSVPMIMADKKASAFH 88
>10_08_0669 +
19742140-19742189,19742886-19742923,19744260-19744448,
19746402-19748188
Length = 687
Score = 29.9 bits (64), Expect = 2.5
Identities = 24/82 (29%), Positives = 36/82 (43%), Gaps = 2/82 (2%)
Frame = +2
Query: 257 RQRSSSGGGANT--AYADGVRMEEIVEGAVGALHILAKESHNRQLIRQQNVIPIFVQLLF 430
R+ S GG + AY DG +E AVGAL L + + + V+P V +L
Sbjct: 481 RRAVVSEGGLRSLLAYLDGPLPQE---SAVGALRNLVSSAISPDSLVSLGVLPRLVHVLR 537
Query: 431 NEIENIQRVAAGVLCELAVEKE 496
Q+ AA +C ++ E
Sbjct: 538 EGSVGAQQAAAAAICRVSSSSE 559
>07_03_0698 - 20765305-20768526
Length = 1073
Score = 29.9 bits (64), Expect = 2.5
Identities = 16/61 (26%), Positives = 29/61 (47%), Gaps = 4/61 (6%)
Frame = +3
Query: 69 RLHYGLPVIVKLLQPPSRWPLVKAVV----GLVRNLALCSANYAPLREHGAVHHLVRLLM 236
+LH GL + + PP W + A++ L+ +L +CS +HHL ++ +
Sbjct: 886 KLHRGLLSLSIRMDPPGNWDAIDAILLRPPKLLESLHICSIRSRLPPRIKELHHLAKITL 945
Query: 237 R 239
R
Sbjct: 946 R 946
>06_03_0332 + 19652207-19652995
Length = 262
Score = 29.9 bits (64), Expect = 2.5
Identities = 24/72 (33%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Frame = -1
Query: 294 AVLAPP-PEELRCLWCRCRHASAGAPDDERRRVPATERSWRNRAPGCVLSPRRPSLEASE 118
A L+PP P+ RC + A+A A D R + +R+P + S R L A+
Sbjct: 157 ASLSPPLPQLRRCAPSPPKEAAAAAAADTSRANDDDSSAAASRSPSPIRSSTRFDLAAAA 216
Query: 117 KEAVAASRSPAI 82
+ AA+RSPA+
Sbjct: 217 ID--AAARSPAM 226
>01_01_1093 + 8627731-8627889,8627934-8627996,8628671-8628721
Length = 90
Score = 29.9 bits (64), Expect = 2.5
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = -2
Query: 785 LLVKGWSGPIQALVTLLWPEHVLYIG 708
LLV WSG IQ L +W +H++ IG
Sbjct: 42 LLVLVWSGMIQDLQAGMWIDHIVMIG 67
>12_02_0828 -
23502276-23503472,23503568-23504002,23504097-23504213,
23505330-23505396,23505685-23505725,23506161-23506237,
23506699-23506945
Length = 726
Score = 29.5 bits (63), Expect = 3.4
Identities = 19/62 (30%), Positives = 31/62 (50%)
Frame = +3
Query: 84 LPVIVKLLQPPSRWPLVKAVVGLVRNLALCSANYAPLREHGAVHHLVRLLMRAYNDTRDN 263
+P+++ LL AV L+ NL++ N A + GAV +V +L + R+N
Sbjct: 443 IPLLLSLLSSSDLRTQEHAVTALL-NLSIHEDNKASIISSGAVPSIVHVLKNGSMEAREN 501
Query: 264 AA 269
AA
Sbjct: 502 AA 503
>06_01_0016 +
184804-185025,185121-185237,185324-185737,185827-186888
Length = 604
Score = 29.5 bits (63), Expect = 3.4
Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = +2
Query: 335 AVGALHILAKES-HNRQLIRQQNVIPIFVQLLFNEIENIQRVAAGVLCELAVEK 493
A G + +LAK + +NR I + IP+ V LL + Q A L L++ +
Sbjct: 343 AAGEIRLLAKRNVNNRICIAEAGAIPLLVNLLSSSDPRTQEHAVTALLNLSIHE 396
Score = 29.5 bits (63), Expect = 3.4
Identities = 19/62 (30%), Positives = 32/62 (51%)
Frame = +3
Query: 84 LPVIVKLLQPPSRWPLVKAVVGLVRNLALCSANYAPLREHGAVHHLVRLLMRAYNDTRDN 263
+P++V LL AV L+ NL++ N A + + A+ +V +L +TR+N
Sbjct: 367 IPLLVNLLSSSDPRTQEHAVTALL-NLSIHENNKASIVDSHAIPKIVEVLKTGSMETREN 425
Query: 264 AA 269
AA
Sbjct: 426 AA 427
>02_05_0602 +
30283893-30284170,30286259-30286305,30286534-30287510,
30287611-30287920,30288561-30290197
Length = 1082
Score = 29.5 bits (63), Expect = 3.4
Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Frame = +2
Query: 317 EEIVEGAVGALHILAK-ESHNRQLIRQQNVIPIFVQLLFNEIENIQRVAAGVLCELAVEK 493
E +V A+ L LAK NR+ + + V + +LL N I+ A +LC L ++
Sbjct: 372 EAMVLEAIHELKSLAKLRGKNREQMHKIGVTRLLARLLDNHNVQIRHSALELLCFLVEDE 431
Query: 494 EGAEM 508
EG ++
Sbjct: 432 EGKDI 436
>01_06_0629 + 30712268-30713023
Length = 251
Score = 29.5 bits (63), Expect = 3.4
Identities = 16/30 (53%), Positives = 17/30 (56%)
Frame = -2
Query: 329 PRSPPYERRQRKQYWLHRPKSCVVSGVVVG 240
PRSP Y RR+R W CV S VVVG
Sbjct: 53 PRSPQYLRRRRCVIWC--GGCCVTSAVVVG 80
>11_06_0033 -
19437746-19437916,19438063-19438145,19438266-19438359,
19438478-19438551,19438825-19438861,19440767-19440844,
19440927-19441022,19441719-19441815,19441910-19442015,
19442136-19442208,19442537-19442680,19443241-19443681
Length = 497
Score = 29.1 bits (62), Expect = 4.4
Identities = 16/68 (23%), Positives = 30/68 (44%)
Frame = +2
Query: 317 EEIVEGAVGALHILAKESHNRQLIRQQNVIPIFVQLLFNEIENIQRVAAGVLCELAVEKE 496
E ++E +G + + N +I IP+ +Q L + ++N A G L L
Sbjct: 398 ERLIEFGIGGICNSCADPANASVITHCGGIPLVIQCLSSPVKNTVNYALGALYYLCNPST 457
Query: 497 GAEMSKPK 520
++ KP+
Sbjct: 458 KKDILKPE 465
>08_01_0996 +
10089800-10090149,10090426-10090483,10092922-10093126,
10093201-10093280,10093377-10093477,10093566-10093691,
10094099-10094101,10094736-10094763,10094875-10094961,
10095187-10095273,10095346-10095411,10095511-10095603,
10095688-10095744,10095834-10095959,10096049-10096139,
10096233-10096321,10096951-10097141,10097224-10097322,
10098814-10098829
Length = 650
Score = 29.1 bits (62), Expect = 4.4
Identities = 29/87 (33%), Positives = 37/87 (42%)
Frame = +2
Query: 107 TASFSLASSEGRRGLSTQPGALFRQLRSVAGTRRRSSSGAPADACLQRHQRQRSSSGGGA 286
TA ++ SS+ G A R L V +RR +A +R QR R SS GGA
Sbjct: 2 TAKLAVQSSDSDEG---GRAAADRFLAVVEEAKRRKRRAVMEEA--KRRQR-RPSSVGGA 55
Query: 287 NTAYADGVRMEEIVEGAVGALHILAKE 367
+ DG R G GA + KE
Sbjct: 56 SRGSGDGDRRAPRDAGGGGAAAVTEKE 82
>07_03_0097 + 13372270-13372399,13372958-13373457
Length = 209
Score = 29.1 bits (62), Expect = 4.4
Identities = 29/97 (29%), Positives = 42/97 (43%), Gaps = 4/97 (4%)
Frame = -1
Query: 393 CRISCLLWLSLAKICKAPTAPSTISSIRTPSA*AVLAPPPEELRCLWCRCR-HASAGAPD 217
CR C+L + C AP APS+ SS + + +PP E C R + H +A AP
Sbjct: 96 CR-RCILPPIVCSSCYAPPAPSSCSSHGCSCSPSNSSPPAAE-ACNGSRQQAHGTAAAPP 153
Query: 216 DERRRVPATERSWRNRAPGCVLS---PRRPSLEASEK 115
+ P + + + P V + R SL S K
Sbjct: 154 HPEEKKP-VKSNLKKAPPAAVAAQEEKNRVSLVVSRK 189
>03_06_0416 - 33780911-33781861
Length = 316
Score = 29.1 bits (62), Expect = 4.4
Identities = 27/81 (33%), Positives = 37/81 (45%)
Frame = -1
Query: 339 TAPSTISSIRTPSA*AVLAPPPEELRCLWCRCRHASAGAPDDERRRVPATERSWRNRAPG 160
T P + ++ TPS AV P P +C AS P R PAT R AP
Sbjct: 14 TPPRSPTAGGTPSRLAVAPPSPTTPQC----AIPASPHTPGRGRAPPPATPR-----APR 64
Query: 159 CVLSPRRPSLEASEKEAVAAS 97
++ R+PS +A +K+ A S
Sbjct: 65 PEITLRQPSSQAQQKQKRAPS 85
>03_01_0119 + 935554-937161
Length = 535
Score = 29.1 bits (62), Expect = 4.4
Identities = 19/93 (20%), Positives = 43/93 (46%), Gaps = 1/93 (1%)
Frame = +2
Query: 329 EGAVGALHILAKESHNRQLIRQQNVIPIFVQLLFNEIENIQRVAAGVLCELAVEKEGAEM 508
+ A A+ ++ + ++++ + +P+ V++L + + VAA + L A
Sbjct: 393 QAAAAAICRISTTTDMKRVVGEHGCVPLLVRMLDAKSNGAREVAAQAMASLVGYPPNARE 452
Query: 509 SKPKGQPLRSLNCCIQEMKGSP-RTLQPFCSAC 604
+ G +S+ C +Q + SP T + + AC
Sbjct: 453 VRRDG---KSVPCLVQLLDPSPANTAKKYAIAC 482
>04_04_0648 -
26936123-26936447,26936540-26936841,26937043-26937915,
26937995-26938108,26938285-26938612,26938719-26938843,
26938926-26938991,26939099-26939166,26939262-26939343,
26939433-26939546,26939647-26939747,26940429-26940678
Length = 915
Score = 28.7 bits (61), Expect = 5.9
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +3
Query: 42 DSEMAQNAVRLHYGLPVIVKLLQPPSRWPL 131
+ ++A+ +R GL I LQ PSRWPL
Sbjct: 710 NGDLAEGTIR-SVGLDPITDALQSPSRWPL 738
>03_02_0691 +
10432615-10433109,10433155-10433216,10433526-10433565,
10434562-10434807,10435020-10435189,10435323-10435539,
10435615-10435755,10435943-10436026
Length = 484
Score = 28.7 bits (61), Expect = 5.9
Identities = 10/26 (38%), Positives = 18/26 (69%)
Frame = -2
Query: 287 WLHRPKSCVVSGVVVGTHQQAHQMMN 210
W H + VV G+V+G+ +Q+ QM++
Sbjct: 168 WKHHTNTSVVHGLVIGSKRQSDQMVH 193
>03_02_0538 +
9299639-9300046,9300362-9300509,9300648-9300652,
9302886-9303290,9303379-9304608
Length = 731
Score = 28.7 bits (61), Expect = 5.9
Identities = 19/62 (30%), Positives = 31/62 (50%)
Frame = +3
Query: 84 LPVIVKLLQPPSRWPLVKAVVGLVRNLALCSANYAPLREHGAVHHLVRLLMRAYNDTRDN 263
+P++V LL V L+ NL++ N A + GAV +V +L R + R+N
Sbjct: 437 IPILVSLLSITDVSTQEHVVTALL-NLSIYEENKARIITSGAVPGVVHVLKRGSMEAREN 495
Query: 264 AA 269
+A
Sbjct: 496 SA 497
>07_03_1086 + 23858419-23859423,23859527-23859610
Length = 362
Score = 28.3 bits (60), Expect = 7.8
Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = +3
Query: 159 NLALCSANYAPLREHGAVHHLVRLLMRAYND-TRDNAA 269
NL++C N A + E GA+ LV L A + R+NAA
Sbjct: 131 NLSICDENKAIIVEAGAIRPLVHALKSAASPAARENAA 168
>07_03_0394 - 17633753-17636788
Length = 1011
Score = 28.3 bits (60), Expect = 7.8
Identities = 7/21 (33%), Positives = 15/21 (71%)
Frame = -2
Query: 380 VCCGFLWLKYARLQRRLPRSP 318
+C GF W+++ R + ++P +P
Sbjct: 976 LCLGFFWMRHPRFRHKVPSAP 996
>07_01_0183 +
1297445-1297796,1297896-1298424,1298548-1298630,
1298901-1298989,1299091-1299164,1300196-1300246,
1300439-1300515,1302199-1302863
Length = 639
Score = 28.3 bits (60), Expect = 7.8
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = +2
Query: 65 SAPALWIAGDREAATASFSLASSEGRRGLST 157
+AP+L A D EAA A+ ++AS RG +T
Sbjct: 170 AAPSLVTAADEEAAAAAAAMASWVAARGAAT 200
>06_01_0931 + 7192519-7194075
Length = 518
Score = 28.3 bits (60), Expect = 7.8
Identities = 18/46 (39%), Positives = 25/46 (54%)
Frame = +3
Query: 132 VKAVVGLVRNLALCSANYAPLREHGAVHHLVRLLMRAYNDTRDNAA 269
V A LV NL+L + N + GAV LV +L + + RD+AA
Sbjct: 233 VNAAAALV-NLSLEAENKVRIVRSGAVSPLVEVLRSGHPEARDHAA 277
>04_03_0372 + 15068405-15070000
Length = 531
Score = 28.3 bits (60), Expect = 7.8
Identities = 14/33 (42%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Frame = +2
Query: 542 NCCIQEMKGSPRTLQPFCSA-CPKTSPTITRRD 637
NCC++ G R L C A TSP+ +RRD
Sbjct: 451 NCCVRSPDGLVRALVMTCHAGWSATSPSCSRRD 483
>03_01_0069 + 549787-549791,550033-550303,550405-552201
Length = 690
Score = 28.3 bits (60), Expect = 7.8
Identities = 32/146 (21%), Positives = 56/146 (38%), Gaps = 6/146 (4%)
Frame = +2
Query: 41 RQ*DGAEC-SAPALWIAGDREAATASFSLASSEGRRGLSTQPGALFRQLRSVAGTRRRSS 217
R+ DG S P+L R A + + + R + T+ GAL + R A + ++
Sbjct: 391 RRRDGVSATSIPSLEEELSRLTAALTAAQEARAKERSVETKLGALLEEARREAAQAKANA 450
Query: 218 SGAPADACLQRHQRQRSSSGGGANTAYADGVRMEEI-----VEGAVGALHILAKESHNRQ 382
A + R + + + A A + + E + E A + L +E N +
Sbjct: 451 QSAQEEVSKARQEAILAKAAVDAMEARLEAAKRETLAATTSAEMAAASAAALQQEDENAR 510
Query: 383 LIRQQNVIPIFVQLLFNEIENIQRVA 460
R+ V V L E + + R A
Sbjct: 511 RRRETGVGEGSVTLTMEEYDELSRRA 536
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,801,207
Number of Sequences: 37544
Number of extensions: 595415
Number of successful extensions: 2562
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 2391
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2558
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2244686244
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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