Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40107
         (819 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    29   0.052
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    23   3.4  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    23   3.4  
AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein...    23   3.4  
AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein...    23   3.4  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             23   3.4  
EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.     22   5.9  
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    22   5.9  

>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 29.1 bits (62), Expect = 0.052
 Identities = 13/39 (33%), Positives = 22/39 (56%)
 Frame = -1

Query: 159 CVLSPRRPSLEASEKEAVAASRSPAIHNAGALHSAPSHC 43
           CV++ R  +LEA+E E V   R+  I  A ++ +  + C
Sbjct: 223 CVIASRHRNLEATESENVRPRRNVLIERAKSIRARRTEC 261


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 23.0 bits (47), Expect = 3.4
 Identities = 12/35 (34%), Positives = 17/35 (48%)
 Frame = -3

Query: 490 LYGQFTEHAGGNALNIFNLIEQQLHEYRNDVLLSD 386
           LY    +        I  LI+  + E +NDVLLS+
Sbjct: 340 LYANLMKIVHEKQQEITGLIQNIIQEMKNDVLLSN 374


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 23.0 bits (47), Expect = 3.4
 Identities = 12/35 (34%), Positives = 17/35 (48%)
 Frame = -3

Query: 490 LYGQFTEHAGGNALNIFNLIEQQLHEYRNDVLLSD 386
           LY    +        I  LI+  + E +NDVLLS+
Sbjct: 378 LYANLMKIVHEKQQEITGLIQNIIQEMKNDVLLSN 412


>AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 23.0 bits (47), Expect = 3.4
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +3

Query: 432 MRLKIFSALPPACSVNWP 485
           +R KI+ AL   C V WP
Sbjct: 358 LREKIYGALEGYCRVAWP 375


>AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 23.0 bits (47), Expect = 3.4
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +3

Query: 432 MRLKIFSALPPACSVNWP 485
           +R KI+ AL   C V WP
Sbjct: 358 LREKIYGALEGYCRVAWP 375


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 23.0 bits (47), Expect = 3.4
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = +3

Query: 195  REHGAVHHLVRLLMRAYNDTRDNAALRA 278
            +E+GAV  LV  L R YN   + +  +A
Sbjct: 1548 KEYGAVSGLVVQLQRGYNSGNNRSGEQA 1575


>EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.
          Length = 570

 Score = 22.2 bits (45), Expect = 5.9
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = +3

Query: 192 LREHGAVHHLVR 227
           LRE G +HHL R
Sbjct: 364 LREEGWIHHLAR 375


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 22.2 bits (45), Expect = 5.9
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = -3

Query: 436 LIEQQLHEYRNDVLLSDKLSVV 371
           L E+     RN++LLSD+L  V
Sbjct: 278 LTERPSDRQRNEILLSDELDSV 299


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 248,643
Number of Sequences: 438
Number of extensions: 5329
Number of successful extensions: 14
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26096055
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)