Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40107
(819 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g46510.1 68416.m05049 armadillo/beta-catenin repeat family pr... 36 0.032
At5g37290.1 68418.m04479 armadillo/beta-catenin repeat family pr... 34 0.099
At5g42340.1 68418.m05155 armadillo/beta-catenin repeat family pr... 33 0.17
At3g54850.1 68416.m06077 armadillo/beta-catenin repeat family pr... 32 0.40
At2g44900.1 68415.m05589 armadillo/beta-catenin repeat family pr... 32 0.40
At4g02150.1 68417.m00287 importin alpha-2 subunit identical to i... 32 0.53
At1g71020.1 68414.m08197 armadillo/beta-catenin repeat family pr... 32 0.53
At5g13060.1 68418.m01497 armadillo/beta-catenin repeat family pr... 31 0.70
At4g16143.1 68417.m02447 importin alpha-2, putative (IMPA-2) sim... 31 0.70
At3g20170.1 68416.m02557 armadillo/beta-catenin repeat family pr... 31 1.2
At5g19330.2 68418.m02304 armadillo/beta-catenin repeat family pr... 30 1.6
At5g19330.1 68418.m02303 armadillo/beta-catenin repeat family pr... 30 1.6
At2g28830.1 68415.m03505 armadillo/beta-catenin repeat family pr... 30 1.6
At4g28050.1 68417.m04024 senescence-associated protein, putative... 30 2.1
At3g01400.1 68416.m00063 armadillo/beta-catenin repeat family pr... 30 2.1
At3g06720.2 68416.m00797 importin alpha-1 subunit, putative (IMP... 29 2.8
At3g06720.1 68416.m00796 importin alpha-1 subunit, putative (IMP... 29 2.8
At2g05810.2 68415.m00627 armadillo/beta-catenin repeat family pr... 29 2.8
At2g05810.1 68415.m00626 armadillo/beta-catenin repeat family pr... 29 2.8
At1g18920.1 68414.m02355 hypothetical protein contains Pfam prof... 29 2.8
At5g58680.1 68418.m07352 armadillo/beta-catenin repeat family pr... 29 3.7
At5g01015.1 68418.m00003 expressed protein 29 3.7
At3g60350.1 68416.m06749 armadillo/beta-catenin repeat family pr... 29 3.7
At3g09220.1 68416.m01096 laccase family protein / diphenol oxida... 29 3.7
At2g26780.1 68415.m03212 expressed protein contains Pfam profile... 29 3.7
At3g21060.1 68416.m02662 transducin family protein / WD-40 repea... 29 4.9
At1g70300.1 68414.m08088 potassium transporter, putative similar... 29 4.9
At1g44120.1 68414.m05096 C2 domain-containing protein / armadill... 29 4.9
At4g19830.1 68417.m02907 immunophilin / FKBP-type peptidyl-proly... 28 6.5
At4g14750.1 68417.m02270 calmodulin-binding family protein conta... 28 6.5
At3g19380.1 68416.m02458 U-box domain-containing protein contain... 28 6.5
At1g23030.1 68414.m02877 armadillo/beta-catenin repeat family pr... 28 6.5
At1g03910.1 68414.m00376 expressed protein low similarity to cac... 28 6.5
At3g36659.1 68416.m00783 invertase/pectin methylesterase inhibit... 28 8.6
At3g03440.1 68416.m00342 armadillo/beta-catenin repeat family pr... 28 8.6
>At3g46510.1 68416.m05049 armadillo/beta-catenin repeat family
protein / U-box domain-containing family protein
contains Pfam domain, PF00514:
Armadillo/beta-catenin-like repeats and Pfam, PF04564:
U-box domain
Length = 660
Score = 35.9 bits (79), Expect = 0.032
Identities = 24/85 (28%), Positives = 44/85 (51%)
Frame = +3
Query: 15 LRHLTSRHDDSEMAQNAVRLHYGLPVIVKLLQPPSRWPLVKAVVGLVRNLALCSANYAPL 194
+R L R+ D+ +A + +P++V LL P +V L+ NL++C N +
Sbjct: 376 IRLLAKRNADNRVA---IAEAGAIPLLVGLLSTPDSRIQEHSVTALL-NLSICENNKGAI 431
Query: 195 REHGAVHHLVRLLMRAYNDTRDNAA 269
GA+ +V++L + + R+NAA
Sbjct: 432 VSAGAIPGIVQVLKKGSMEARENAA 456
>At5g37290.1 68418.m04479 armadillo/beta-catenin repeat family
protein contains Pfam profile: PF00514
armadillo/beta-catenin-like repeat
Length = 180
Score = 34.3 bits (75), Expect = 0.099
Identities = 22/73 (30%), Positives = 33/73 (45%), Gaps = 1/73 (1%)
Frame = +2
Query: 317 EEIVEGAVGALHILAKESHNRQLIRQQNVIPIFVQLLFNEIENIQRVAAGVLCELAVE-K 493
EE E V L A + +N ++RQ NV+ +FV + E + G +C E K
Sbjct: 36 EETKERIVANLANFAYDPYNYTILRQLNVLELFVDCITEPNEKLVEFGIGGICNACAEPK 95
Query: 494 EGAEMSKPKGQPL 532
A + + G PL
Sbjct: 96 NVATIVEADGIPL 108
>At5g42340.1 68418.m05155 armadillo/beta-catenin repeat family
protein / U-box domain-containing protein low similarity
to immediate-early fungal elicitor protein CMPG1
[Petroselinum crispum] GI:14582200, GI:14582198;
contains Pfam profiles PF04564: U-box domain, PF00514:
Armadillo/beta-catenin-like repeat
Length = 656
Score = 33.5 bits (73), Expect = 0.17
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Frame = +2
Query: 335 AVGALHILAKES-HNRQLIRQQNVIPIFVQLLFNEIENIQRVAAGVLCELAVEKEGAEMS 511
+V + +LA+E+ NR LI IP+ VQLL IQ A L L++++ ++
Sbjct: 395 SVKQMRLLARENPENRVLIANAGAIPLLVQLLSYPDSGIQENAVTTLLNLSIDEVNKKLI 454
Query: 512 KPKG 523
+G
Sbjct: 455 SNEG 458
Score = 31.9 bits (69), Expect = 0.53
Identities = 17/62 (27%), Positives = 33/62 (53%)
Frame = +3
Query: 84 LPVIVKLLQPPSRWPLVKAVVGLVRNLALCSANYAPLREHGAVHHLVRLLMRAYNDTRDN 263
+P++V+LL P AV L+ NL++ N + GA+ +++ +L + R+N
Sbjct: 419 IPLLVQLLSYPDSGIQENAVTTLL-NLSIDEVNKKLISNEGAIPNIIEILENGNREAREN 477
Query: 264 AA 269
+A
Sbjct: 478 SA 479
>At3g54850.1 68416.m06077 armadillo/beta-catenin repeat family
protein / U-box domain-containing family protein
contains Pfam domain, PF00514:
Armadillo/beta-catenin-like repeats and Pfam, PF04564:
U-box domain
Length = 632
Score = 32.3 bits (70), Expect = 0.40
Identities = 18/62 (29%), Positives = 33/62 (53%)
Frame = +3
Query: 84 LPVIVKLLQPPSRWPLVKAVVGLVRNLALCSANYAPLREHGAVHHLVRLLMRAYNDTRDN 263
+P++V+LL P +V L+ NL++ N + + GA+ +V +L + R+N
Sbjct: 389 IPLLVELLSSPDPRTQEHSVTALL-NLSINEGNKGAIVDAGAITDIVEVLKNGSMEAREN 447
Query: 264 AA 269
AA
Sbjct: 448 AA 449
>At2g44900.1 68415.m05589 armadillo/beta-catenin repeat family
protein / F-box family protein contains similarity to
F-box protein FBL2 GI:6010699 from [Rattus norvegicus];
contains Pfam profiles PF00514:
Armadillo/beta-catenin-like repeat, PF00646: F-box
domain
Length = 930
Score = 32.3 bits (70), Expect = 0.40
Identities = 26/97 (26%), Positives = 40/97 (41%), Gaps = 4/97 (4%)
Frame = +2
Query: 206 RRSSSGAPADACLQRHQRQRSSSGGGANTAYADGVRMEE----IVEGAVGALHILAKESH 373
R+ ++GA + R+ S GG A + E A GAL L+
Sbjct: 627 RQEAAGALWNLSFDDKNRESISVAGGVEALVALAQSCSNASTGLQERAAGALWGLSVSEA 686
Query: 374 NRQLIRQQNVIPIFVQLLFNEIENIQRVAAGVLCELA 484
N I ++ +P + L +E E++ AAG L LA
Sbjct: 687 NSVAIGREGGVPPLIALARSEAEDVHETAAGALWNLA 723
>At4g02150.1 68417.m00287 importin alpha-2 subunit identical to
importin alpha-2 subunit (Karyopherin alpha-2 subunit)
(KAP alpha) SP:O04294 from [Arabidopsis thaliana]
Length = 531
Score = 31.9 bits (69), Expect = 0.53
Identities = 26/99 (26%), Positives = 43/99 (43%), Gaps = 6/99 (6%)
Frame = +2
Query: 329 EGAVGALHILAKESHNRQLIRQQNVIPIFVQLLFNEIENIQRVAAGVLCELAVEKEGAE- 505
E A +I + S N +I + +PIF+QLL + E+++ A L +A +
Sbjct: 138 EAAWALTNIASGTSENTNVIIESGAVPIFIQLLSSASEDVREQAVWALGNVAGDSPKCRD 197
Query: 506 --MSKPKGQPLRSL---NCCIQEMKGSPRTLQPFCSACP 607
+S PL S N + ++ + TL FC P
Sbjct: 198 LVLSYGAMTPLLSQFNENTKLSMLRNATWTLSNFCRGKP 236
>At1g71020.1 68414.m08197 armadillo/beta-catenin repeat family
protein / U-box domain-containing protein contains Pfam
domain, PF00514: Armadillo/beta-catenin-like repeats and
Pfam, PF04564: U-box domain
Length = 628
Score = 31.9 bits (69), Expect = 0.53
Identities = 24/89 (26%), Positives = 41/89 (46%)
Frame = +3
Query: 3 AICALRHLTSRHDDSEMAQNAVRLHYGLPVIVKLLQPPSRWPLVKAVVGLVRNLALCSAN 182
A+ +R L+ R D+ + + +PV+VKLL + V + NL++ N
Sbjct: 361 AVSEIRSLSKRSTDNRIL---IAEAGAIPVLVKLLTSDGDTETQENAVTCILNLSIYEHN 417
Query: 183 YAPLREHGAVHHLVRLLMRAYNDTRDNAA 269
+ GAV +V +L + R+NAA
Sbjct: 418 KELIMLAGAVTSIVLVLRAGSMEARENAA 446
>At5g13060.1 68418.m01497 armadillo/beta-catenin repeat family
protein / BTB/POZ domain-containing protein contains
armadillo/beta-catenin-like repeats, Pfam:PF00514 and a
BTB/POZ domain, Pfam:PF00651
Length = 709
Score = 31.5 bits (68), Expect = 0.70
Identities = 27/82 (32%), Positives = 43/82 (52%), Gaps = 2/82 (2%)
Frame = +2
Query: 317 EEIVEGAVGALHILAKESHNRQLIRQQNVIPIFVQLLFNEIENIQRVAAGVLCELAVEKE 496
E++VE + AL LA+++HN+ I + I + LL + ++Q AA L LA +E
Sbjct: 337 EQVVEMSAFALGRLAQDAHNQAGIAHRGGIISLLNLLDVKTGSVQHNAAFALYGLADNEE 396
Query: 497 G-AEMSKPKG-QPLRSLNCCIQ 556
A+ K G Q L+ N +Q
Sbjct: 397 NVADFIKAGGIQKLQDDNFTVQ 418
>At4g16143.1 68417.m02447 importin alpha-2, putative (IMPA-2)
similar to importin alpha 2 [Capsicum annuum]
GI:13752562; contains Pfam profiles PF01749: Importin
beta binding domain, PF00514:
Armadillo/beta-catenin-like repeat; non-consensus GG
donor splice site at exon 1 and 6; CT acceptor splice
site at exon 2
Length = 444
Score = 31.5 bits (68), Expect = 0.70
Identities = 15/52 (28%), Positives = 29/52 (55%)
Frame = +2
Query: 329 EGAVGALHILAKESHNRQLIRQQNVIPIFVQLLFNEIENIQRVAAGVLCELA 484
E A +I + S N +++ + +PIFVQLL ++ ++++ A L +A
Sbjct: 140 EAAWALTNIASGTSENTKVVIEHGAVPIFVQLLASQSDDVREQAVWALGNVA 191
>At3g20170.1 68416.m02557 armadillo/beta-catenin repeat family
protein contains Pfam profile: PF00514
armadillo/beta-catenin-like repeat
Length = 475
Score = 30.7 bits (66), Expect = 1.2
Identities = 36/140 (25%), Positives = 61/140 (43%), Gaps = 3/140 (2%)
Frame = +2
Query: 122 LASSEGRRGLSTQPGALFRQLRSVAGTRRRSSSGAPADACLQRHQRQRSSSGGGANTAYA 301
LA +EG L + L R LR+ + ++S D RH G GA
Sbjct: 302 LAVAEGNAVLIAEQ--LVRILRAGDNEAKLAASDVLWDLAGYRHSVS-VIRGSGAIPLLI 358
Query: 302 DGVR--MEEIVEGAVGALHILAKESHNRQLIRQQNVIPIFVQLLFNEIENIQRVAAGVLC 475
+ +R E E GA+ L+ ++R+ +IPI ++ L +E E ++ AA L
Sbjct: 359 ELLRDGSLEFRERISGAISQLSYNENDREAFSDSGMIPILIEWLGDESEELRDNAAEALI 418
Query: 476 ELAVEKEG-AEMSKPKGQPL 532
+ ++E A + + G P+
Sbjct: 419 NFSEDQEHYARVREAIGHPV 438
Score = 29.9 bits (64), Expect = 2.1
Identities = 19/69 (27%), Positives = 36/69 (52%)
Frame = +2
Query: 296 YADGVRMEEIVEGAVGALHILAKESHNRQLIRQQNVIPIFVQLLFNEIENIQRVAAGVLC 475
Y DG +++ G AL I++ ++ + + + IP++V+LL + + +A V C
Sbjct: 243 YRDGDDKAKLLAG--NALGIISAQTEYIRPVTEAGSIPLYVELLSGQDPMGKDIAEDVFC 300
Query: 476 ELAVEKEGA 502
LAV + A
Sbjct: 301 ILAVAEGNA 309
>At5g19330.2 68418.m02304 armadillo/beta-catenin repeat family
protein / BTB/POZ domain-containing protein contains
armadillo/beta-catenin-like repeats, Pfam:PF00514 and a
BTB/POZ domain, Pfam:PF00651
Length = 636
Score = 30.3 bits (65), Expect = 1.6
Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Frame = +2
Query: 314 MEEIVEGAVGALHILAKESHN-RQLIRQQNVIPIFVQLLFNEIENIQRVAAGVLCELAVE 490
+ ++ A A+ LA E+ + + +R + IP V+LL +QR AAG L LA +
Sbjct: 170 VNSVIRRAADAITNLAHENSSIKTRVRVEGGIPPLVELLEFSDSKVQRAAAGALRTLAFK 229
Query: 491 KE 496
+
Sbjct: 230 ND 231
>At5g19330.1 68418.m02303 armadillo/beta-catenin repeat family
protein / BTB/POZ domain-containing protein contains
armadillo/beta-catenin-like repeats, Pfam:PF00514 and a
BTB/POZ domain, Pfam:PF00651
Length = 710
Score = 30.3 bits (65), Expect = 1.6
Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Frame = +2
Query: 314 MEEIVEGAVGALHILAKESHN-RQLIRQQNVIPIFVQLLFNEIENIQRVAAGVLCELAVE 490
+ ++ A A+ LA E+ + + +R + IP V+LL +QR AAG L LA +
Sbjct: 169 VNSVIRRAADAITNLAHENSSIKTRVRVEGGIPPLVELLEFSDSKVQRAAAGALRTLAFK 228
Query: 491 KE 496
+
Sbjct: 229 ND 230
>At2g28830.1 68415.m03505 armadillo/beta-catenin repeat family
protein / U-box domain-containing protein contains Pfam
domain, PF00514: Armadillo/beta-catenin-like repeats and
Pfam, PF04564: U-box domain
Length = 654
Score = 30.3 bits (65), Expect = 1.6
Identities = 19/70 (27%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Frame = +3
Query: 63 AVRLHYGLPVIVKLLQPPSRWPLVKAVVGLVRNLALCSANYAPL-REHGAVHHLVRLLMR 239
A+ +P++V LL + + V + NL++C N + GAV +V +L +
Sbjct: 392 AIAASGAIPLLVNLLTISNDSRTQEHAVTSILNLSICQENKGKIVYSSGAVPGIVHVLQK 451
Query: 240 AYNDTRDNAA 269
+ R+NAA
Sbjct: 452 GSMEARENAA 461
Score = 28.7 bits (61), Expect = 4.9
Identities = 14/32 (43%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +2
Query: 335 AVGALHILAKES-HNRQLIRQQNVIPIFVQLL 427
A G + +LAK++ HNR I IP+ V LL
Sbjct: 375 AAGEIRLLAKQNNHNRVAIAASGAIPLLVNLL 406
>At4g28050.1 68417.m04024 senescence-associated protein, putative
similar to senescence-associated protein 5 [Hemerocallis
hybrid cultivar] gi|3551954|gb|AAC34855
Length = 263
Score = 29.9 bits (64), Expect = 2.1
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = -1
Query: 396 CCRISCLLWLSL 361
CCR+SCLLWL L
Sbjct: 65 CCRVSCLLWLYL 76
>At3g01400.1 68416.m00063 armadillo/beta-catenin repeat family
protein contains Pfam profile: PF00514
armadillo/beta-catenin-like repeats (4 copies)
Length = 355
Score = 29.9 bits (64), Expect = 2.1
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = +3
Query: 144 VGLVRNLALCSANYAPLREHGAVHHLVRLLMRAYNDTRDNAA 269
V + NL+LC N + GA+ LVR L ++NAA
Sbjct: 126 VTAILNLSLCDENKESIASSGAIKPLVRALKMGTPTAKENAA 167
>At3g06720.2 68416.m00797 importin alpha-1 subunit, putative (IMPA1)
similar to importin alpha-1 subunit (Karyopherin alpha-1
subunit, KAP alpha) [Arabidopsis thaliana]
SWISS-PROT:Q96321
Length = 532
Score = 29.5 bits (63), Expect = 2.8
Identities = 15/52 (28%), Positives = 28/52 (53%)
Frame = +2
Query: 329 EGAVGALHILAKESHNRQLIRQQNVIPIFVQLLFNEIENIQRVAAGVLCELA 484
E A +I + S + +++ N +PIFVQLL + ++++ A L +A
Sbjct: 135 EAAWALTNIASGTSDHTKVVIDHNAVPIFVQLLASPSDDVREQAVWALGNVA 186
>At3g06720.1 68416.m00796 importin alpha-1 subunit, putative (IMPA1)
similar to importin alpha-1 subunit (Karyopherin alpha-1
subunit, KAP alpha) [Arabidopsis thaliana]
SWISS-PROT:Q96321
Length = 532
Score = 29.5 bits (63), Expect = 2.8
Identities = 15/52 (28%), Positives = 28/52 (53%)
Frame = +2
Query: 329 EGAVGALHILAKESHNRQLIRQQNVIPIFVQLLFNEIENIQRVAAGVLCELA 484
E A +I + S + +++ N +PIFVQLL + ++++ A L +A
Sbjct: 135 EAAWALTNIASGTSDHTKVVIDHNAVPIFVQLLASPSDDVREQAVWALGNVA 186
>At2g05810.2 68415.m00627 armadillo/beta-catenin repeat family
protein weak similarity to CCLS 65 [Silene latifolia]
GI:2570102; contains Pfam profile PF00514:
Armadillo/beta-catenin-like repeat
Length = 580
Score = 29.5 bits (63), Expect = 2.8
Identities = 30/133 (22%), Positives = 58/133 (43%), Gaps = 7/133 (5%)
Frame = +2
Query: 95 REAATASFSL---ASSEGRRGLSTQPGA--LFRQLRSVAGTRRRSSSGAPADACLQRHQR 259
RE A A+ SL +S++ R+ + Q G L R L + + ++ + +A
Sbjct: 219 REHALAAVSLLTSSSADSRKTVFEQGGLGPLLRLLET-GSSPFKTRAAIAIEAITADPAT 277
Query: 260 QRSSSGGGANTAYADGVRM--EEIVEGAVGALHILAKESHNRQLIRQQNVIPIFVQLLFN 433
+ S G T + R +++ E GA+ +A R + ++ IP+ +QLL +
Sbjct: 278 AWAISAYGGVTVLIEACRSGSKQVQEHIAGAISNIAAVEEIRTTLAEEGAIPVLIQLLIS 337
Query: 434 EIENIQRVAAGVL 472
++Q A +
Sbjct: 338 GSSSVQEKTANFI 350
>At2g05810.1 68415.m00626 armadillo/beta-catenin repeat family
protein weak similarity to CCLS 65 [Silene latifolia]
GI:2570102; contains Pfam profile PF00514:
Armadillo/beta-catenin-like repeat
Length = 580
Score = 29.5 bits (63), Expect = 2.8
Identities = 30/133 (22%), Positives = 58/133 (43%), Gaps = 7/133 (5%)
Frame = +2
Query: 95 REAATASFSL---ASSEGRRGLSTQPGA--LFRQLRSVAGTRRRSSSGAPADACLQRHQR 259
RE A A+ SL +S++ R+ + Q G L R L + + ++ + +A
Sbjct: 219 REHALAAVSLLTSSSADSRKTVFEQGGLGPLLRLLET-GSSPFKTRAAIAIEAITADPAT 277
Query: 260 QRSSSGGGANTAYADGVRM--EEIVEGAVGALHILAKESHNRQLIRQQNVIPIFVQLLFN 433
+ S G T + R +++ E GA+ +A R + ++ IP+ +QLL +
Sbjct: 278 AWAISAYGGVTVLIEACRSGSKQVQEHIAGAISNIAAVEEIRTTLAEEGAIPVLIQLLIS 337
Query: 434 EIENIQRVAAGVL 472
++Q A +
Sbjct: 338 GSSSVQEKTANFI 350
>At1g18920.1 68414.m02355 hypothetical protein contains Pfam profile
PF03794: Domain of Unknown function
Length = 980
Score = 29.5 bits (63), Expect = 2.8
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = +3
Query: 150 LVRNLALCSANYAPLREHGAVHHLVRLLMRAYNDTRDNAALRAVE 284
LVR A + +Y+ L E HL++ L + ++D D A A+E
Sbjct: 629 LVRGSARLATDYSFLGEFQQRFHLIKFLYQIHSDAEDEIAFPALE 673
>At5g58680.1 68418.m07352 armadillo/beta-catenin repeat family
protein contains Pfam profile: PF00514
armadillo/beta-catenin-like repeats (4 copies)
Length = 357
Score = 29.1 bits (62), Expect = 3.7
Identities = 17/42 (40%), Positives = 21/42 (50%)
Frame = +3
Query: 144 VGLVRNLALCSANYAPLREHGAVHHLVRLLMRAYNDTRDNAA 269
V V NL+LC N + GAV LV L T++NAA
Sbjct: 124 VTAVLNLSLCDENKEMIVSSGAVKPLVNALRLGTPTTKENAA 165
>At5g01015.1 68418.m00003 expressed protein
Length = 104
Score = 29.1 bits (62), Expect = 3.7
Identities = 21/89 (23%), Positives = 37/89 (41%), Gaps = 2/89 (2%)
Frame = +3
Query: 219 LVRLLMRAYNDTRDNAALRAVE--PILLTLTAFVWRRSWKAPLEPCIF*PKKATTDNLSD 392
L+ ++ N D L A E P+ + + VWRR PLE C+ K ++ +
Sbjct: 13 LLATILVTTNGQGDGTGLNAEEMWPVEVGMEYRVWRRKLMTPLELCLE-CKCCSSTTCAT 71
Query: 393 SRTSFRYSCNCCSMRLKIFSALPPACSVN 479
F +C + + + +P +C N
Sbjct: 72 MPCCFGINCQLPNKPFGVCAFVPKSCHCN 100
>At3g60350.1 68416.m06749 armadillo/beta-catenin repeat family
protein / F-box family protein contains Pfam profiles
PF00514: Armadillo/beta-catenin-like repeat, PF00646:
F-box domain; similar to F-box protein FBL2 (GI:6010699)
[Rattus norvegicus]
Length = 928
Score = 29.1 bits (62), Expect = 3.7
Identities = 20/74 (27%), Positives = 31/74 (41%)
Frame = +2
Query: 329 EGAVGALHILAKESHNRQLIRQQNVIPIFVQLLFNEIENIQRVAAGVLCELAVEKEGAEM 508
E GAL L+ N I + IP + L+ +E E++ AAG L L+ A
Sbjct: 663 ERVAGALWGLSVSEANSIAIGHEGGIPPLIALVRSEAEDVHETAAGALWNLSFNPGNALR 722
Query: 509 SKPKGQPLRSLNCC 550
+G + + C
Sbjct: 723 IVEEGGVVALVQLC 736
>At3g09220.1 68416.m01096 laccase family protein / diphenol oxidase
family protein similar to laccase [Pinus
taeda][GI:13661201], laccase GB:CAA74105 [Populus
balsamifera subsp. trichocarpa]; contains Pfam profile:
Multicopper oxidases
Length = 567
Score = 29.1 bits (62), Expect = 3.7
Identities = 14/46 (30%), Positives = 25/46 (54%)
Frame = +3
Query: 150 LVRNLALCSANYAPLREHGAVHHLVRLLMRAYNDTRDNAALRAVEP 287
+++N AL +A P+ HG H++ Y+ +RD + L V+P
Sbjct: 456 VLQNHALIAAESHPMHLHGFNFHVLAQGFGNYDPSRDRSKLNLVDP 501
>At2g26780.1 68415.m03212 expressed protein contains Pfam profile TBP
(TATA-binding protein) -interacting protein 120 (TIP120);
contains TIGRFAM profile TIGR01612: reticulocyte binding
protein
Length = 1866
Score = 29.1 bits (62), Expect = 3.7
Identities = 22/70 (31%), Positives = 31/70 (44%)
Frame = +2
Query: 395 QNVIPIFVQLLFNEIENIQRVAAGVLCELAVEKEGAEMSKPKGQPLRSLNCCIQEMKGSP 574
+ +IP QL+ + RV L V+K G+E+ G LR L +E K S
Sbjct: 1375 EQLIPRLTQLVRGGVGLNTRVGVASFISLLVQKVGSEIKPFTGMLLRLLFPVAKEEKSS- 1433
Query: 575 RTLQPFCSAC 604
+ F SAC
Sbjct: 1434 AAKRAFSSAC 1443
>At3g21060.1 68416.m02662 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to Retinoblastoma-binding protein 5 (RBBP-5)
[Homo sapiens](RBQ-3)
Length = 547
Score = 28.7 bits (61), Expect = 4.9
Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = -2
Query: 782 LVKGWSGPIQALVTLLW-PEHVLYIGLYRKSLDHIW 678
LVK GP +AL+ L W P H + + + L +IW
Sbjct: 328 LVKILEGPKEALIDLAWHPVHPIIVSVSLAGLVYIW 363
>At1g70300.1 68414.m08088 potassium transporter, putative similar to
potassium transporter HAK2p [Mesembryanthemum
crystallinum] gi|14091471|gb|AAK53759; KUP/HAK/KT
Transporter family member, PMID:11500563; contains Pfam
profile PF02705: K+ potassium transporter
Length = 782
Score = 28.7 bits (61), Expect = 4.9
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = -3
Query: 499 SFFLYGQFTEHAGGNALNIFNLIEQQLHEYRNDVLLSDKLSVVAF 365
+F LY HA N+L L ++QL EY+ D + S + F
Sbjct: 93 TFALYSLLCRHARVNSLPSCQLADEQLIEYKTDSIGSSSMPQSGF 137
>At1g44120.1 68414.m05096 C2 domain-containing protein /
armadillo/beta-catenin repeat family protein similar to
CCLS 65 [Silene latifolia] GI:2570102; contains Pfam
profiles PF00514: Armadillo/beta-catenin-like repeat,
PF00168: C2 domain
Length = 2114
Score = 28.7 bits (61), Expect = 4.9
Identities = 17/51 (33%), Positives = 29/51 (56%)
Frame = +3
Query: 81 GLPVIVKLLQPPSRWPLVKAVVGLVRNLALCSANYAPLREHGAVHHLVRLL 233
G+ +I+KLLQ + A L R + + +++ + + E GAV LV+LL
Sbjct: 191 GVDIILKLLQSSNPVSQSNAASLLARLIRIFTSSISKVEESGAVQVLVQLL 241
>At4g19830.1 68417.m02907 immunophilin / FKBP-type peptidyl-prolyl
cis-trans isomerase family protein similar to 70 kDa
peptidylprolyl isomerase (Peptidylprolyl cis-trans
isomerase) (PPiase) (Rotamase) (SP:Q43207) [Triticum
aestivum]; FKBP-type peptidyl-prolyl cis-trans
isomerase,Synechocystis sp., PIR2:S75144; contains Pfam
PF00254: peptidyl-prolyl cis-trans isomerase, FKBP-type
Length = 229
Score = 28.3 bits (60), Expect = 6.5
Identities = 19/60 (31%), Positives = 32/60 (53%)
Frame = -1
Query: 573 GDPFIS*MQQFSERSGCPFGFDISAPSFSTANSQSTPAATR*IFSISLNNSCTNIGMTFC 394
G P I+ + S S F SAPS S+++S + AA+R S+S+ +++ +FC
Sbjct: 12 GAPLITTVHFTSPPSLRIFASRSSAPSSSSSSSSTVAAASRRSISLSIIAVTSSVVSSFC 71
>At4g14750.1 68417.m02270 calmodulin-binding family protein contains
Pfam profile PF00612: IQ calmodulin-binding motif
Length = 387
Score = 28.3 bits (60), Expect = 6.5
Identities = 23/65 (35%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Frame = +2
Query: 104 ATASFSLASSEGRRGLSTQPGALFRQLRSVAGTRRRSSSGAPADACLQRHQR-QRSSSGG 280
A S A + + +P ++ + ++G RRRSS AP + + R R QRSSS
Sbjct: 270 ANTQSSKAKARSQSAPKQRPPEIYE--KQMSG-RRRSSMEAPRNNGVPRAVRMQRSSSQL 326
Query: 281 GANTA 295
G+NTA
Sbjct: 327 GSNTA 331
>At3g19380.1 68416.m02458 U-box domain-containing protein contains
similarity to immediate-early fungal elicitor protein
CMPG1 GI:14582200 [Petroselinum crispum]; contains Pfam
profile PF04564: U-box domain
Length = 421
Score = 28.3 bits (60), Expect = 6.5
Identities = 25/89 (28%), Positives = 40/89 (44%), Gaps = 3/89 (3%)
Frame = +3
Query: 12 ALRHLTSRHDDSEMAQNAVRLHYGLPVIVKLL-QPPSRWPLVKAVVGLVRNLALCSANY- 185
ALR L DS+ + + H +++K+L + LV + L+ L + N
Sbjct: 128 ALRRLRGFARDSDKNRVLIAAHNATEILIKILFSETTSSELVSESLALLVMLPITEPNQF 187
Query: 186 -APLREHGAVHHLVRLLMRAYNDTRDNAA 269
+ + G V L RLL + +TR NAA
Sbjct: 188 VSISSDPGRVEFLTRLLFDSSIETRVNAA 216
>At1g23030.1 68414.m02877 armadillo/beta-catenin repeat family
protein / U-box domain-containing protein contains Pfam
domain, PF00514: Armadillo/beta-catenin-like repeats and
Pfam, PF04564: U-box domain
Length = 612
Score = 28.3 bits (60), Expect = 6.5
Identities = 24/89 (26%), Positives = 41/89 (46%)
Frame = +3
Query: 3 AICALRHLTSRHDDSEMAQNAVRLHYGLPVIVKLLQPPSRWPLVKAVVGLVRNLALCSAN 182
A+ +R L+ R D+ + + +PV+V LL A+ V NL++ N
Sbjct: 351 AVSEIRSLSKRSTDNRIL---IAEAGAIPVLVNLLTSEDVATQENAIT-CVLNLSIYENN 406
Query: 183 YAPLREHGAVHHLVRLLMRAYNDTRDNAA 269
+ GAV +V++L + R+NAA
Sbjct: 407 KELIMFAGAVTSIVQVLRAGTMEARENAA 435
>At1g03910.1 68414.m00376 expressed protein low similarity to cactin
[Drosophila melanogaster] GI:7673675; expression
supported by MPSS
Length = 672
Score = 28.3 bits (60), Expect = 6.5
Identities = 22/62 (35%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Frame = +2
Query: 92 DREAATASFSLAS-SEGRRGLSTQPGALFRQLRSVAGTRRRSSSGAPADACLQRHQRQRS 268
+ E+ + S S S S+G LS + ++ S TRRRSSS +D+ R ++RS
Sbjct: 21 ESESGSESESYTSDSDGSDDLSPPRSSRRKKGSSSRRTRRRSSSDDSSDSDGGRKSKKRS 80
Query: 269 SS 274
SS
Sbjct: 81 SS 82
>At3g36659.1 68416.m00783 invertase/pectin methylesterase inhibitor
family protein similar to extensin-like protein [Zea
mays] GI:5917666
Length = 264
Score = 27.9 bits (59), Expect = 8.6
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +3
Query: 102 LLQPPSRWPLVKAVVGLVRNLALCSANYAPL 194
LL PP P +K + G N LC ++ +PL
Sbjct: 120 LLNPPLLSPEIKTICGKTDNPPLCESSVSPL 150
>At3g03440.1 68416.m00342 armadillo/beta-catenin repeat family
protein contains Pfam profile: PF00514
armadillo/beta-catenin-like repeat
Length = 408
Score = 27.9 bits (59), Expect = 8.6
Identities = 31/114 (27%), Positives = 47/114 (41%), Gaps = 2/114 (1%)
Frame = +2
Query: 266 SSSGGGANTAYADGVRMEEIVEGAVGALHI--LAKESHNRQLIRQQNVIPIFVQLLFNEI 439
SSS + +R E+ A I L K SH + Q V P+ L F+
Sbjct: 59 SSSSSASIQRVLSLIRSEDCDSRLFAAKEIRRLTKTSHRCRRHFSQAVEPLVSMLRFDSP 118
Query: 440 ENIQRVAAGVLCELAVEKEGAEMSKPKGQPLRSLNCCIQEMKGSPRTLQPFCSA 601
E+ A L LAV+ E ++S + L + I ++ + TLQ + SA
Sbjct: 119 ESHHEAALLALLNLAVKDEKNKVSIIEAGALEPI---INFLQSNSPTLQEYASA 169
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,358,561
Number of Sequences: 28952
Number of extensions: 424282
Number of successful extensions: 1446
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 1378
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1442
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1872844800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -