Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40106
         (814 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069164-1|AAL39309.1|  545|Drosophila melanogaster GH19483p pro...    30   3.3  
AE014298-2972|AAF45368.1|  545|Drosophila melanogaster CG9581-PA...    30   3.3  
AY070987-1|AAL48609.1|  252|Drosophila melanogaster RE08075p pro...    29   5.7  
AE014297-3562|AAF56308.2|  252|Drosophila melanogaster CG13618-P...    29   5.7  

>AY069164-1|AAL39309.1|  545|Drosophila melanogaster GH19483p
           protein.
          Length = 545

 Score = 30.3 bits (65), Expect = 3.3
 Identities = 15/41 (36%), Positives = 23/41 (56%)
 Frame = -2

Query: 609 IHQNCPKVD*QFKNIYY*VENDLSISGTANRSVCIETCLKD 487
           I Q+C  V  +F+ I   +E+DL I+   +  V  E C+KD
Sbjct: 482 IGQDCGDVPPEFRGIGIRIEDDLLINENGHVEVLTEACVKD 522


>AE014298-2972|AAF45368.1|  545|Drosophila melanogaster CG9581-PA
           protein.
          Length = 545

 Score = 30.3 bits (65), Expect = 3.3
 Identities = 15/41 (36%), Positives = 23/41 (56%)
 Frame = -2

Query: 609 IHQNCPKVD*QFKNIYY*VENDLSISGTANRSVCIETCLKD 487
           I Q+C  V  +F+ I   +E+DL I+   +  V  E C+KD
Sbjct: 482 IGQDCGDVPPEFRGIGIRIEDDLLINENGHVEVLTEACVKD 522


>AY070987-1|AAL48609.1|  252|Drosophila melanogaster RE08075p
           protein.
          Length = 252

 Score = 29.5 bits (63), Expect = 5.7
 Identities = 14/29 (48%), Positives = 21/29 (72%)
 Frame = +1

Query: 37  YAQSNWDQIGTNVANKIFSKVPYDQIFLA 123
           YA+S +  I   ++NK+F KVP+D IFL+
Sbjct: 225 YAKS-FGIIFRELSNKLFEKVPFDNIFLS 252


>AE014297-3562|AAF56308.2|  252|Drosophila melanogaster CG13618-PA
           protein.
          Length = 252

 Score = 29.5 bits (63), Expect = 5.7
 Identities = 14/29 (48%), Positives = 21/29 (72%)
 Frame = +1

Query: 37  YAQSNWDQIGTNVANKIFSKVPYDQIFLA 123
           YA+S +  I   ++NK+F KVP+D IFL+
Sbjct: 225 YAKS-FGIIFRELSNKLFEKVPFDNIFLS 252


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,146,241
Number of Sequences: 53049
Number of extensions: 659321
Number of successful extensions: 1205
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1190
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1205
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3818998872
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)