Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40106
         (814 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81030-17|CAB02706.2|   72|Caenorhabditis elegans Hypothetical p...    28   6.9  
Z66567-4|CAA91493.2|  618|Caenorhabditis elegans Hypothetical pr...    28   6.9  
Z54342-4|CAA91150.1|  447|Caenorhabditis elegans Hypothetical pr...    28   6.9  
Z29560-12|CAL22705.1|  395|Caenorhabditis elegans Hypothetical p...    28   6.9  
Z19157-3|CAA79566.3|  395|Caenorhabditis elegans Hypothetical pr...    28   9.1  

>Z81030-17|CAB02706.2|   72|Caenorhabditis elegans Hypothetical
           protein C01G10.4 protein.
          Length = 72

 Score = 28.3 bits (60), Expect = 6.9
 Identities = 14/40 (35%), Positives = 17/40 (42%)
 Frame = -3

Query: 803 YIIYFLKIINNYNNTVCYSAYYTR*FQLKT*HYKNKRRYN 684
           Y  Y+    NNYNN   Y+ YY         +Y N   YN
Sbjct: 21  YTYYYYPNNNNYNNNNGYTTYYYYPNNNNNGYYYNNNGYN 60


>Z66567-4|CAA91493.2|  618|Caenorhabditis elegans Hypothetical
           protein ZK455.4 protein.
          Length = 618

 Score = 28.3 bits (60), Expect = 6.9
 Identities = 16/35 (45%), Positives = 19/35 (54%)
 Frame = +2

Query: 95  KYPMIRYF*RYINFP*IIKSSVIFCFF**DDVSLL 199
           KY M+RY  + IN P   K S +FC F  D V  L
Sbjct: 51  KYKMLRYAKKAINEPENRKMSCLFCTFAVDGVQAL 85


>Z54342-4|CAA91150.1|  447|Caenorhabditis elegans Hypothetical
           protein C08H9.7 protein.
          Length = 447

 Score = 28.3 bits (60), Expect = 6.9
 Identities = 21/66 (31%), Positives = 29/66 (43%)
 Frame = -1

Query: 814 ISHHILFIFSKLLIITIILCAIVHTTLGSFS*KPDTTKISDDIIRLTIDSSGLRLAIHEF 635
           IS   +F+FSKL+I+    C  V T++ +      TT         TI S    L     
Sbjct: 43  ISTPFVFVFSKLIILACCKCQTVSTSINALMLNNSTTSQHALKSNETI-SPPAALCGKRI 101

Query: 634 PGYFSE 617
            GYF+E
Sbjct: 102 VGYFAE 107


>Z29560-12|CAL22705.1|  395|Caenorhabditis elegans Hypothetical
           protein K03H1.13 protein.
          Length = 395

 Score = 28.3 bits (60), Expect = 6.9
 Identities = 16/38 (42%), Positives = 19/38 (50%)
 Frame = -1

Query: 541 KYIWHREPISMYRNLLEGYFMAQNAFSYPIFILTNQLF 428
           +YI H  P S+YRN   G F +   FS  I  L  Q F
Sbjct: 292 EYIEHLLPNSIYRNSFPGAFKSNIVFSNGISKLPEQSF 329


>Z19157-3|CAA79566.3|  395|Caenorhabditis elegans Hypothetical
           protein ZC84.4 protein.
          Length = 395

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 24/66 (36%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
 Frame = -3

Query: 572 KIYITRLKMI*VYLAPRTDQYVSKPA*RIFYGSK--CIFISYFHINQPVIS*LNF*KLFT 399
           K+  T L +  +Y+   T  +VS  A RI+   K   I ISYF    P IS + +  +FT
Sbjct: 251 KVITTVLLLTVIYVLCWTPYWVSMFANRIWIMEKKSIIIISYFIHLLPYISCVAYPLIFT 310

Query: 398 I*NRCI 381
           + NR I
Sbjct: 311 LLNRGI 316


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,778,397
Number of Sequences: 27780
Number of extensions: 372895
Number of successful extensions: 658
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 642
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 658
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1998381620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)