Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40104
(852 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z72507-15|CAJ55245.1| 365|Caenorhabditis elegans Hypothetical p... 103 2e-22
Z72507-7|CAD56569.1| 373|Caenorhabditis elegans Hypothetical pr... 103 2e-22
Z72507-6|CAA96631.1| 398|Caenorhabditis elegans Hypothetical pr... 103 2e-22
AF068713-14|AAK73895.1| 172|Caenorhabditis elegans Ground-like ... 28 7.3
>Z72507-15|CAJ55245.1| 365|Caenorhabditis elegans Hypothetical
protein F17C11.9c protein.
Length = 365
Score = 103 bits (246), Expect = 2e-22
Identities = 42/62 (67%), Positives = 51/62 (82%)
Frame = +3
Query: 510 IPYFWEKFDPENYSIWYAEYKYPEELAKVFMSCNLITGMFQRLDKMRKQAFASVCLFGED 689
IP+FWE FD +N+SIW EYKYPE+L FMSCNLI GM+QRL+K++K AFAS+ LFG D
Sbjct: 237 IPHFWENFDADNWSIWKCEYKYPEDLTLAFMSCNLINGMYQRLEKLKKNAFASMILFGTD 296
Query: 690 NN 695
NN
Sbjct: 297 NN 298
Score = 61.3 bits (142), Expect = 9e-10
Identities = 45/122 (36%), Positives = 64/122 (52%), Gaps = 7/122 (5%)
Frame = +1
Query: 433 FDSMPKGTFNMDDFKRVYSNEDEAKLFLTSGRSLTPRTIPFGMPNTNTLRNSLRCS*AVT 612
F MPKGTF +D+FKR YSNED T+ +++ F N + + + +T
Sbjct: 210 FQDMPKGTFVLDNFKRSYSNED------TATKAIPHFWENFDADNWSIWKCEYKYPEDLT 263
Query: 613 LLRV-CS--RG*TKCANRL---SHPSACLVKT-TISTISGVWVWRGKELVFPLSSDWRWD 771
L + C+ G + +L + S L T STISG+WVW+G +L F LS DW+ D
Sbjct: 264 LAFMSCNLINGMYQRLEKLKKNAFASMILFGTDNNSTISGIWVWKGDKLAFELSPDWQVD 323
Query: 772 YE 777
YE
Sbjct: 324 YE 325
Score = 44.0 bits (99), Expect = 1e-04
Identities = 18/33 (54%), Positives = 24/33 (72%)
Frame = +2
Query: 143 QHVLDPSVRSSLINVQRWFLTVAHQPQVSAVVG 241
Q+VLD + R S++NV RWF TV +QP V V+G
Sbjct: 118 QYVLDANARKSIVNVTRWFRTVVNQPAVKEVLG 150
>Z72507-7|CAD56569.1| 373|Caenorhabditis elegans Hypothetical
protein F17C11.9b protein.
Length = 373
Score = 103 bits (246), Expect = 2e-22
Identities = 42/62 (67%), Positives = 51/62 (82%)
Frame = +3
Query: 510 IPYFWEKFDPENYSIWYAEYKYPEELAKVFMSCNLITGMFQRLDKMRKQAFASVCLFGED 689
IP+FWE FD +N+SIW EYKYPE+L FMSCNLI GM+QRL+K++K AFAS+ LFG D
Sbjct: 245 IPHFWENFDADNWSIWKCEYKYPEDLTLAFMSCNLINGMYQRLEKLKKNAFASMILFGTD 304
Query: 690 NN 695
NN
Sbjct: 305 NN 306
Score = 82.2 bits (194), Expect = 4e-16
Identities = 41/80 (51%), Positives = 57/80 (71%)
Frame = +2
Query: 2 QNVERAKSDLLAALKVLDGHLLTRTFLVTERITLADVIVFSTLLHAFQHVLDPSVRSSLI 181
+ VE+ K++L L+VLD L+ +T+LV ER++LADV V LL AFQ+VLD + R S++
Sbjct: 79 KTVEQYKNELNGQLQVLDRVLVKKTYLVGERLSLADVSVALDLLPAFQYVLDANARKSIV 138
Query: 182 NVQRWFLTVAHQPQVSAVVG 241
NV RWF TV +QP V V+G
Sbjct: 139 NVTRWFRTVVNQPAVKEVLG 158
Score = 61.3 bits (142), Expect = 9e-10
Identities = 45/122 (36%), Positives = 64/122 (52%), Gaps = 7/122 (5%)
Frame = +1
Query: 433 FDSMPKGTFNMDDFKRVYSNEDEAKLFLTSGRSLTPRTIPFGMPNTNTLRNSLRCS*AVT 612
F MPKGTF +D+FKR YSNED T+ +++ F N + + + +T
Sbjct: 218 FQDMPKGTFVLDNFKRSYSNED------TATKAIPHFWENFDADNWSIWKCEYKYPEDLT 271
Query: 613 LLRV-CS--RG*TKCANRL---SHPSACLVKT-TISTISGVWVWRGKELVFPLSSDWRWD 771
L + C+ G + +L + S L T STISG+WVW+G +L F LS DW+ D
Sbjct: 272 LAFMSCNLINGMYQRLEKLKKNAFASMILFGTDNNSTISGIWVWKGDKLAFELSPDWQVD 331
Query: 772 YE 777
YE
Sbjct: 332 YE 333
>Z72507-6|CAA96631.1| 398|Caenorhabditis elegans Hypothetical
protein F17C11.9a protein.
Length = 398
Score = 103 bits (246), Expect = 2e-22
Identities = 42/62 (67%), Positives = 51/62 (82%)
Frame = +3
Query: 510 IPYFWEKFDPENYSIWYAEYKYPEELAKVFMSCNLITGMFQRLDKMRKQAFASVCLFGED 689
IP+FWE FD +N+SIW EYKYPE+L FMSCNLI GM+QRL+K++K AFAS+ LFG D
Sbjct: 270 IPHFWENFDADNWSIWKCEYKYPEDLTLAFMSCNLINGMYQRLEKLKKNAFASMILFGTD 329
Query: 690 NN 695
NN
Sbjct: 330 NN 331
Score = 82.2 bits (194), Expect = 4e-16
Identities = 41/80 (51%), Positives = 57/80 (71%)
Frame = +2
Query: 2 QNVERAKSDLLAALKVLDGHLLTRTFLVTERITLADVIVFSTLLHAFQHVLDPSVRSSLI 181
+ VE+ K++L L+VLD L+ +T+LV ER++LADV V LL AFQ+VLD + R S++
Sbjct: 104 KTVEQYKNELNGQLQVLDRVLVKKTYLVGERLSLADVSVALDLLPAFQYVLDANARKSIV 163
Query: 182 NVQRWFLTVAHQPQVSAVVG 241
NV RWF TV +QP V V+G
Sbjct: 164 NVTRWFRTVVNQPAVKEVLG 183
Score = 61.3 bits (142), Expect = 9e-10
Identities = 45/122 (36%), Positives = 64/122 (52%), Gaps = 7/122 (5%)
Frame = +1
Query: 433 FDSMPKGTFNMDDFKRVYSNEDEAKLFLTSGRSLTPRTIPFGMPNTNTLRNSLRCS*AVT 612
F MPKGTF +D+FKR YSNED T+ +++ F N + + + +T
Sbjct: 243 FQDMPKGTFVLDNFKRSYSNED------TATKAIPHFWENFDADNWSIWKCEYKYPEDLT 296
Query: 613 LLRV-CS--RG*TKCANRL---SHPSACLVKT-TISTISGVWVWRGKELVFPLSSDWRWD 771
L + C+ G + +L + S L T STISG+WVW+G +L F LS DW+ D
Sbjct: 297 LAFMSCNLINGMYQRLEKLKKNAFASMILFGTDNNSTISGIWVWKGDKLAFELSPDWQVD 356
Query: 772 YE 777
YE
Sbjct: 357 YE 358
>AF068713-14|AAK73895.1| 172|Caenorhabditis elegans Ground-like
(grd related) protein29 protein.
Length = 172
Score = 28.3 bits (60), Expect = 7.3
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +2
Query: 698 PPSPECGCGAEKSS 739
PP P+CGCG +K S
Sbjct: 70 PPPPQCGCGRKKRS 83
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,525,184
Number of Sequences: 27780
Number of extensions: 434609
Number of successful extensions: 1299
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1215
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1298
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2118983636
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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