Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40103
         (511 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z99281-11|CAB16517.1|  154|Caenorhabditis elegans Hypothetical p...   115   2e-26
Z81457-5|CAB03817.2|  584|Caenorhabditis elegans Hypothetical pr...    31   0.64 
U53151-3|AAB37067.2|  388|Caenorhabditis elegans Serpentine rece...    28   3.4  
Z81039-8|CAB02779.2|  225|Caenorhabditis elegans Hypothetical pr...    28   4.5  
U13019-15|AAK84567.2|  317|Caenorhabditis elegans Serpentine rec...    28   4.5  
U97006-1|AAC47965.1| 2076|Caenorhabditis elegans Hypothetical pr...    27   7.9  

>Z99281-11|CAB16517.1|  154|Caenorhabditis elegans Hypothetical
           protein Y57G11C.16 protein.
          Length = 154

 Score =  115 bits (276), Expect = 2e-26
 Identities = 50/74 (67%), Positives = 65/74 (87%)
 Frame = +3

Query: 30  MSLVIPDKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECT 209
           MSL+IP+KFQHI R+MNTNIDG RKV +A+TAIKGVGRR++ +  +KAD+D++KRAGE T
Sbjct: 1   MSLIIPEKFQHIHRVMNTNIDGNRKVPYALTAIKGVGRRFAFVCCRKADVDVNKRAGELT 60

Query: 210 EEEVEKIITIMSNP 251
           EE+ +KI+TIM NP
Sbjct: 61  EEDFDKIVTIMQNP 74



 Score =  110 bits (264), Expect = 7e-25
 Identities = 47/60 (78%), Positives = 54/60 (90%)
 Frame = +2

Query: 254 EYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQH 433
           +YKIP+WFLNRQKDI DGK  QL S+ +D+KLREDLER+KKIR HRG+RHYWGLRVRGQH
Sbjct: 76  QYKIPNWFLNRQKDIKDGKTGQLLSTAVDNKLREDLERMKKIRLHRGLRHYWGLRVRGQH 135


>Z81457-5|CAB03817.2|  584|Caenorhabditis elegans Hypothetical
           protein C01G12.7 protein.
          Length = 584

 Score = 30.7 bits (66), Expect = 0.64
 Identities = 17/45 (37%), Positives = 24/45 (53%)
 Frame = +3

Query: 351 VKIWRGSRRFALTEGCDITGAFVCVVSTLRLLAGEEELLVYQRRS 485
           +K +R   + AL     +TGA + + +TL LLA    LL  QR S
Sbjct: 137 IKKYRWGMKMALLFHLCVTGALLSITNTLHLLASGYHLLKRQRNS 181


>U53151-3|AAB37067.2|  388|Caenorhabditis elegans Serpentine
           receptor, class r protein9 protein.
          Length = 388

 Score = 28.3 bits (60), Expect = 3.4
 Identities = 14/43 (32%), Positives = 22/43 (51%)
 Frame = -1

Query: 274 PVWYLILLGFDMIVIIFSTSSSVHSPARLSRSMSAFLRTMLEY 146
           PV Y I+LGF+M  IIF +      P  L   + +  R ++ +
Sbjct: 276 PVLYCIILGFNMAAIIFYSVFVSIPPCTLQEHLKSTNRILINH 318


>Z81039-8|CAB02779.2|  225|Caenorhabditis elegans Hypothetical
           protein C25D7.10 protein.
          Length = 225

 Score = 27.9 bits (59), Expect = 4.5
 Identities = 21/74 (28%), Positives = 34/74 (45%)
 Frame = -1

Query: 433 VLTTHTKAPVMSHPSVSANLLEPLQIFTEF*IQVGGGQLAVFTINNILLPI*EPVWYLIL 254
           V   H  A  +S  ++S      L  F+ F I +  GQL  +T+ N          YL+L
Sbjct: 102 VFLVHLLAIFLSATTLSLTFDTELVYFSCFIIFMNTGQLVFYTLQN----------YLVL 151

Query: 253 LGFDMIVIIFSTSS 212
               M++++ +TSS
Sbjct: 152 TPLKMLILLIATSS 165


>U13019-15|AAK84567.2|  317|Caenorhabditis elegans Serpentine
           receptor, class g (gamma)protein 5 protein.
          Length = 317

 Score = 27.9 bits (59), Expect = 4.5
 Identities = 12/41 (29%), Positives = 22/41 (53%)
 Frame = -3

Query: 311 IYHQQYPFAYLGTSLVSYTPRIRHDSDNFFNLFFCAFASTL 189
           I  + +P +  G   ++YT R+R  S + F + F A + T+
Sbjct: 164 IISETFPVSIFGGFTLAYTKRVRWASLSMFQMIFMAISLTI 204


>U97006-1|AAC47965.1| 2076|Caenorhabditis elegans Hypothetical protein
            C13F10.4 protein.
          Length = 2076

 Score = 27.1 bits (57), Expect = 7.9
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +2

Query: 113  CDDGYQRCWPEVLQHCS 163
            C + YQ CWP +L  CS
Sbjct: 1512 CREYYQICWPPILLACS 1528


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,582,152
Number of Sequences: 27780
Number of extensions: 243742
Number of successful extensions: 775
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 752
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 775
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 988489374
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)