Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40102
(496 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL132865-1|CAB60595.1| 110|Caenorhabditis elegans Hypothetical ... 72 2e-13
U97194-7|AAB52450.2| 107|Caenorhabditis elegans Hypothetical pr... 65 3e-11
Z70752-5|CAA94758.1| 901|Caenorhabditis elegans Hypothetical pr... 31 0.35
Z70750-16|CAA94750.1| 901|Caenorhabditis elegans Hypothetical p... 31 0.35
U39852-1|AAK39256.2| 2314|Caenorhabditis elegans Hypothetical pr... 29 1.9
U53153-9|AAC69041.1| 511|Caenorhabditis elegans Hypothetical pr... 27 7.5
AF106589-3|AAT81179.1| 511|Caenorhabditis elegans Hypothetical ... 27 7.5
AC024882-7|AAF60924.1| 285|Caenorhabditis elegans Hypothetical ... 27 7.5
Z75956-2|CAJ90493.2| 384|Caenorhabditis elegans Hypothetical pr... 27 9.9
Z75956-1|CAB00128.2| 489|Caenorhabditis elegans Hypothetical pr... 27 9.9
>AL132865-1|CAB60595.1| 110|Caenorhabditis elegans Hypothetical
protein Y62E10A.1 protein.
Length = 110
Score = 72.1 bits (169), Expect = 2e-13
Identities = 34/58 (58%), Positives = 43/58 (74%)
Frame = +3
Query: 66 MRYVAAYLLAVLGGKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAAG 239
MRYV+AYLLAVLGG P D++ ILS+VG++AD E K V++ L GK VE+LIA G
Sbjct: 1 MRYVSAYLLAVLGGNANPKVDDLKNILSAVGVDADAETAKLVVSRLAGKTVEELIAEG 58
>U97194-7|AAB52450.2| 107|Caenorhabditis elegans Hypothetical
protein C37A2.7 protein.
Length = 107
Score = 64.9 bits (151), Expect = 3e-11
Identities = 29/63 (46%), Positives = 42/63 (66%)
Frame = +3
Query: 66 MRYVAAYLLAVLGGKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGRE 245
M+Y+ AYLLA LGG +P+A DV K+L + G++ D E V+ L GK + ++IA G+
Sbjct: 1 MKYLGAYLLATLGGNASPSAQDVLKVLEAGGLDCDMENANSVVDALKGKTISEVIAQGKV 60
Query: 246 KLS 254
KLS
Sbjct: 61 KLS 63
>Z70752-5|CAA94758.1| 901|Caenorhabditis elegans Hypothetical
protein F25B3.1 protein.
Length = 901
Score = 31.5 bits (68), Expect = 0.35
Identities = 16/41 (39%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Frame = +3
Query: 111 TTPAAADVEKILSSVGIEADGEKLKKVITEL-NGKDVEQLI 230
+TPA+A +I + GI EK+ +ITE+ N KD+E+ +
Sbjct: 444 STPASASDHRISRTFGINESEEKVVAMITEIRNQKDLEEAV 484
>Z70750-16|CAA94750.1| 901|Caenorhabditis elegans Hypothetical
protein F25B3.1 protein.
Length = 901
Score = 31.5 bits (68), Expect = 0.35
Identities = 16/41 (39%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Frame = +3
Query: 111 TTPAAADVEKILSSVGIEADGEKLKKVITEL-NGKDVEQLI 230
+TPA+A +I + GI EK+ +ITE+ N KD+E+ +
Sbjct: 444 STPASASDHRISRTFGINESEEKVVAMITEIRNQKDLEEAV 484
>U39852-1|AAK39256.2| 2314|Caenorhabditis elegans Hypothetical protein
K10C2.1 protein.
Length = 2314
Score = 29.1 bits (62), Expect = 1.9
Identities = 19/59 (32%), Positives = 32/59 (54%)
Frame = -1
Query: 226 SCSTSLPLSSVITFLSFSPSASIPTELRIFSTSAAAGVVLPPSTASKYAAT*RIF*VLI 50
S +T+ P ++T + P +S PT + ST+ AA V+ T+S + + +F VLI
Sbjct: 2254 SVATAGPTGPILTVV---PVSSAPTSGAVSSTATAAPVITTTKTSSVLSVSFSMFIVLI 2309
>U53153-9|AAC69041.1| 511|Caenorhabditis elegans Hypothetical
protein T19A5.5 protein.
Length = 511
Score = 27.1 bits (57), Expect = 7.5
Identities = 11/31 (35%), Positives = 14/31 (45%)
Frame = +1
Query: 7 FKTNVILSALHVSCQLGLKKCVTWPRIYWLC 99
F+ + H CQ G +CV PR W C
Sbjct: 45 FRRVFVTHKQHFKCQTGQNQCVPDPRGRWNC 75
>AF106589-3|AAT81179.1| 511|Caenorhabditis elegans Hypothetical
protein Y44E3A.4 protein.
Length = 511
Score = 27.1 bits (57), Expect = 7.5
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = -1
Query: 226 SCSTSLPLSSVITFLSFSPSASIPTELRIFSTSAAAGVVLPPSTASKYA 80
S ST P+S+ + + + SIP+ S+ + + PPS+ASK A
Sbjct: 436 SISTVNPMSASMFVPATAKEISIPSNSSATSSPFKSSSIAPPSSASKPA 484
>AC024882-7|AAF60924.1| 285|Caenorhabditis elegans Hypothetical
protein Y9C9A.12 protein.
Length = 285
Score = 27.1 bits (57), Expect = 7.5
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +2
Query: 29 RHYTFRVN*DLKNALRGRVFTGCAGWQDHASC 124
+H+T R++ D+KN R + FT + SC
Sbjct: 98 KHFTIRISDDIKNKNRDQCFTRILNTLNSKSC 129
>Z75956-2|CAJ90493.2| 384|Caenorhabditis elegans Hypothetical
protein R31.2b protein.
Length = 384
Score = 26.6 bits (56), Expect = 9.9
Identities = 23/82 (28%), Positives = 36/82 (43%)
Frame = +3
Query: 18 RYSFGITRFVSIRT*KMRYVAAYLLAVLGGKTTPAAADVEKILSSVGIEADGEKLKKVIT 197
R SF TRF+ +RT + Y L P +DVE++ +++ G+K+ + T
Sbjct: 70 RDSFNKTRFLLVRTSVEKGKETYKRVTL-----PGGSDVERLKTTIEKACKGKKVDMIFT 124
Query: 198 ELNGKDVEQLIAAGREKLSQCQ 263
VE + R K CQ
Sbjct: 125 LPENDLVESIDQIHRFK--DCQ 144
>Z75956-1|CAB00128.2| 489|Caenorhabditis elegans Hypothetical
protein R31.2a protein.
Length = 489
Score = 26.6 bits (56), Expect = 9.9
Identities = 23/82 (28%), Positives = 36/82 (43%)
Frame = +3
Query: 18 RYSFGITRFVSIRT*KMRYVAAYLLAVLGGKTTPAAADVEKILSSVGIEADGEKLKKVIT 197
R SF TRF+ +RT + Y L P +DVE++ +++ G+K+ + T
Sbjct: 175 RDSFNKTRFLLVRTSVEKGKETYKRVTL-----PGGSDVERLKTTIEKACKGKKVDMIFT 229
Query: 198 ELNGKDVEQLIAAGREKLSQCQ 263
VE + R K CQ
Sbjct: 230 LPENDLVESIDQIHRFK--DCQ 249
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,682,083
Number of Sequences: 27780
Number of extensions: 130988
Number of successful extensions: 425
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 416
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 425
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 935344784
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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