Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40101
         (838 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071114-1|AAL48736.1|  358|Drosophila melanogaster RE16722p pro...    31   1.5  
AE014135-44|AAF59358.2|  463|Drosophila melanogaster CG1629-PA p...    31   1.5  

>AY071114-1|AAL48736.1|  358|Drosophila melanogaster RE16722p
           protein.
          Length = 358

 Score = 31.5 bits (68), Expect = 1.5
 Identities = 18/53 (33%), Positives = 31/53 (58%)
 Frame = +2

Query: 293 VQYFNQS*RGYHFDSLCFDKRDMLLTTLEINLDLYKYIDFIFSTLKTKKKSIV 451
           VQ   Q+  GY + S  F +     + LEI  + +KY+DF++ST   +++SI+
Sbjct: 26  VQPVFQTLDGYEYTSQSFSQNLQSESQLEIVYE-WKYLDFLYSTFVQRQQSIL 77


>AE014135-44|AAF59358.2|  463|Drosophila melanogaster CG1629-PA
           protein.
          Length = 463

 Score = 31.5 bits (68), Expect = 1.5
 Identities = 18/53 (33%), Positives = 31/53 (58%)
 Frame = +2

Query: 293 VQYFNQS*RGYHFDSLCFDKRDMLLTTLEINLDLYKYIDFIFSTLKTKKKSIV 451
           VQ   Q+  GY + S  F +     + LEI  + +KY+DF++ST   +++SI+
Sbjct: 26  VQPVFQTLDGYEYTSQSFSQNLQSESQLEIVYE-WKYLDFLYSTFVQRQQSIL 77


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,097,413
Number of Sequences: 53049
Number of extensions: 432244
Number of successful extensions: 694
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 652
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 694
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3983256888
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)