BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= wdV40099 (840 letters) Database: human 237,096 sequences; 76,859,062 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value X81198-1|CAA57072.1| 472|Homo sapiens archain protein. 140 4e-33 X81197-1|CAA57071.1| 511|Homo sapiens archain protein. 140 4e-33 BC093638-1|AAH93638.1| 511|Homo sapiens archain protein. 140 4e-33 BC093636-1|AAH93636.1| 511|Homo sapiens archain 1 protein. 140 4e-33 BC064936-1|AAH64936.1| 189|Homo sapiens ARCN1 protein protein. 140 4e-33 Y08387-1|CAA69667.1| 453|Homo sapiens mu-adaptin-related protei... 34 0.56 BC018705-1|AAH18705.1| 453|Homo sapiens AP4M1 protein protein. 34 0.56 AF155158-1|AAD43328.1| 453|Homo sapiens adaptor-related protein... 34 0.56 AF020796-1|AAD25869.1| 453|Homo sapiens mu-adaptin-related prot... 34 0.56 BX640759-1|CAE45865.1| 192|Homo sapiens hypothetical protein pr... 33 0.97 BC067812-1|AAH67812.1| 526|Homo sapiens cyclin L1 protein. 31 3.9 BC007081-1|AAH07081.1| 526|Homo sapiens cyclin L1 protein. 31 3.9 AY358663-1|AAQ89026.1| 299|Homo sapiens CCNL1 protein. 31 3.9 AF180920-1|AAD53184.1| 526|Homo sapiens cyclin L ania-6a protein. 31 3.9 BT007425-1|AAP36093.1| 513|Homo sapiens serine protease inhibit... 31 5.2 BC018702-1|AAH18702.1| 513|Homo sapiens serine peptidase inhibi... 31 5.2 BC004140-1|AAH04140.1| 513|Homo sapiens serine peptidase inhibi... 31 5.2 AY358969-1|AAQ89328.1| 529|Homo sapiens HAI-1 protein. 31 5.2 AY296715-1|AAP44001.1| 529|Homo sapiens hepatocyte growth facto... 31 5.2 AB000095-1|BAA25014.1| 513|Homo sapiens hepatocyte growth facto... 31 5.2 >X81198-1|CAA57072.1| 472|Homo sapiens archain protein. Length = 472 Score = 140 bits (340), Expect = 4e-33 Identities = 68/109 (62%), Positives = 84/109 (77%) Frame = +3 Query: 183 NDRRTAAYICRNRVRQICLPATRQLYMLLITTKASNILEDLETLRLFSRVVPEYCVQLTE 362 N + ++ VR + P + LYM+LITTK SNILEDLETLRLFSRV+PEYC L E Sbjct: 2 NTGKQHTFVETESVRYVYQPMEK-LYMVLITTKNSNILEDLETLRLFSRVIPEYCRALEE 60 Query: 363 TEVLNQAFNLLFAFDEIVALGYRESVNLAQVRSFVEMDSHEEKIYQAVR 509 E+ F+L+FAFDEIVALGYRE+VNLAQ+R+F EMDSHEEK+++AVR Sbjct: 61 NEISEHCFDLIFAFDEIVALGYRENVNLAQIRTFTEMDSHEEKVFRAVR 109 Score = 44.8 bits (101), Expect = 4e-04 Identities = 18/23 (78%), Positives = 21/23 (91%) Frame = +1 Query: 184 MTGGRQHTFVETESVRYVYQPLD 252 M G+QHTFVETESVRYVYQP++ Sbjct: 1 MNTGKQHTFVETESVRYVYQPME 23 >X81197-1|CAA57071.1| 511|Homo sapiens archain protein. Length = 511 Score = 140 bits (340), Expect = 4e-33 Identities = 68/109 (62%), Positives = 84/109 (77%) Frame = +3 Query: 183 NDRRTAAYICRNRVRQICLPATRQLYMLLITTKASNILEDLETLRLFSRVVPEYCVQLTE 362 N + ++ VR + P + LYM+LITTK SNILEDLETLRLFSRV+PEYC L E Sbjct: 41 NTGKQHTFVETESVRYVYQPMEK-LYMVLITTKNSNILEDLETLRLFSRVIPEYCRALEE 99 Query: 363 TEVLNQAFNLLFAFDEIVALGYRESVNLAQVRSFVEMDSHEEKIYQAVR 509 E+ F+L+FAFDEIVALGYRE+VNLAQ+R+F EMDSHEEK+++AVR Sbjct: 100 NEISEHCFDLIFAFDEIVALGYRENVNLAQIRTFTEMDSHEEKVFRAVR 148 Score = 111 bits (268), Expect = 2e-24 Identities = 51/62 (82%), Positives = 58/62 (93%) Frame = +1 Query: 67 MVLIAATVCTKSGKALVSRQFVEMTKARIEGLLAAFPKLMTGGRQHTFVETESVRYVYQP 246 MVL+AA VCTK+GKA+VSRQFVEMT+ RIEGLLAAFPKLM G+QHTFVETESVRYVYQP Sbjct: 1 MVLLAAAVCTKAGKAIVSRQFVEMTRTRIEGLLAAFPKLMNTGKQHTFVETESVRYVYQP 60 Query: 247 LD 252 ++ Sbjct: 61 ME 62 >BC093638-1|AAH93638.1| 511|Homo sapiens archain protein. Length = 511 Score = 140 bits (340), Expect = 4e-33 Identities = 68/109 (62%), Positives = 84/109 (77%) Frame = +3 Query: 183 NDRRTAAYICRNRVRQICLPATRQLYMLLITTKASNILEDLETLRLFSRVVPEYCVQLTE 362 N + ++ VR + P + LYM+LITTK SNILEDLETLRLFSRV+PEYC L E Sbjct: 41 NTGKQHTFVETESVRYVYQPMEK-LYMVLITTKNSNILEDLETLRLFSRVIPEYCRALEE 99 Query: 363 TEVLNQAFNLLFAFDEIVALGYRESVNLAQVRSFVEMDSHEEKIYQAVR 509 E+ F+L+FAFDEIVALGYRE+VNLAQ+R+F EMDSHEEK+++AVR Sbjct: 100 NEISEHCFDLIFAFDEIVALGYRENVNLAQIRTFTEMDSHEEKVFRAVR 148 Score = 111 bits (268), Expect = 2e-24 Identities = 51/62 (82%), Positives = 58/62 (93%) Frame = +1 Query: 67 MVLIAATVCTKSGKALVSRQFVEMTKARIEGLLAAFPKLMTGGRQHTFVETESVRYVYQP 246 MVL+AA VCTK+GKA+VSRQFVEMT+ RIEGLLAAFPKLM G+QHTFVETESVRYVYQP Sbjct: 1 MVLLAAAVCTKAGKAIVSRQFVEMTRTRIEGLLAAFPKLMNTGKQHTFVETESVRYVYQP 60 Query: 247 LD 252 ++ Sbjct: 61 ME 62 >BC093636-1|AAH93636.1| 511|Homo sapiens archain 1 protein. Length = 511 Score = 140 bits (340), Expect = 4e-33 Identities = 68/109 (62%), Positives = 84/109 (77%) Frame = +3 Query: 183 NDRRTAAYICRNRVRQICLPATRQLYMLLITTKASNILEDLETLRLFSRVVPEYCVQLTE 362 N + ++ VR + P + LYM+LITTK SNILEDLETLRLFSRV+PEYC L E Sbjct: 41 NTGKQHTFVETESVRYVYQPMEK-LYMVLITTKNSNILEDLETLRLFSRVIPEYCRALEE 99 Query: 363 TEVLNQAFNLLFAFDEIVALGYRESVNLAQVRSFVEMDSHEEKIYQAVR 509 E+ F+L+FAFDEIVALGYRE+VNLAQ+R+F EMDSHEEK+++AVR Sbjct: 100 NEISEHCFDLIFAFDEIVALGYRENVNLAQIRTFTEMDSHEEKVFRAVR 148 Score = 111 bits (268), Expect = 2e-24 Identities = 51/62 (82%), Positives = 58/62 (93%) Frame = +1 Query: 67 MVLIAATVCTKSGKALVSRQFVEMTKARIEGLLAAFPKLMTGGRQHTFVETESVRYVYQP 246 MVL+AA VCTK+GKA+VSRQFVEMT+ RIEGLLAAFPKLM G+QHTFVETESVRYVYQP Sbjct: 1 MVLLAAAVCTKAGKAIVSRQFVEMTRTRIEGLLAAFPKLMNTGKQHTFVETESVRYVYQP 60 Query: 247 LD 252 ++ Sbjct: 61 ME 62 >BC064936-1|AAH64936.1| 189|Homo sapiens ARCN1 protein protein. Length = 189 Score = 140 bits (340), Expect = 4e-33 Identities = 68/109 (62%), Positives = 84/109 (77%) Frame = +3 Query: 183 NDRRTAAYICRNRVRQICLPATRQLYMLLITTKASNILEDLETLRLFSRVVPEYCVQLTE 362 N + ++ VR + P + LYM+LITTK SNILEDLETLRLFSRV+PEYC L E Sbjct: 41 NTGKQHTFVETESVRYVYQPMEK-LYMVLITTKNSNILEDLETLRLFSRVIPEYCRALEE 99 Query: 363 TEVLNQAFNLLFAFDEIVALGYRESVNLAQVRSFVEMDSHEEKIYQAVR 509 E+ F+L+FAFDEIVALGYRE+VNLAQ+R+F EMDSHEEK+++AVR Sbjct: 100 NEISEHCFDLIFAFDEIVALGYRENVNLAQIRTFTEMDSHEEKVFRAVR 148 Score = 111 bits (268), Expect = 2e-24 Identities = 51/62 (82%), Positives = 58/62 (93%) Frame = +1 Query: 67 MVLIAATVCTKSGKALVSRQFVEMTKARIEGLLAAFPKLMTGGRQHTFVETESVRYVYQP 246 MVL+AA VCTK+GKA+VSRQFVEMT+ RIEGLLAAFPKLM G+QHTFVETESVRYVYQP Sbjct: 1 MVLLAAAVCTKAGKAIVSRQFVEMTRTRIEGLLAAFPKLMNTGKQHTFVETESVRYVYQP 60 Query: 247 LD 252 ++ Sbjct: 61 ME 62 >Y08387-1|CAA69667.1| 453|Homo sapiens mu-adaptin-related protein 2 protein. Length = 453 Score = 34.3 bits (75), Expect = 0.56 Identities = 16/75 (21%), Positives = 39/75 (52%) Frame = +3 Query: 255 LYMLLITTKASNILEDLETLRLFSRVVPEYCVQLTETEVLNQAFNLLFAFDEIVALGYRE 434 LY+++ T++ + LE L + ++ +YC L E + + DE++ GY + Sbjct: 64 LYLVVTTSENVSPFSLLELLSRLATLLGDYCGSLGEGTISRNVALVYELLDEVLDYGYVQ 123 Query: 435 SVNLAQVRSFVEMDS 479 + + +R+F++ ++ Sbjct: 124 TTSTEMLRNFIQTEA 138 >BC018705-1|AAH18705.1| 453|Homo sapiens AP4M1 protein protein. Length = 453 Score = 34.3 bits (75), Expect = 0.56 Identities = 16/75 (21%), Positives = 39/75 (52%) Frame = +3 Query: 255 LYMLLITTKASNILEDLETLRLFSRVVPEYCVQLTETEVLNQAFNLLFAFDEIVALGYRE 434 LY+++ T++ + LE L + ++ +YC L E + + DE++ GY + Sbjct: 64 LYLVVTTSENVSPFSLLELLSRLATLLGDYCGSLGEGTISRNVALVYELLDEVLDYGYVQ 123 Query: 435 SVNLAQVRSFVEMDS 479 + + +R+F++ ++ Sbjct: 124 TTSTEMLRNFIQTEA 138 >AF155158-1|AAD43328.1| 453|Homo sapiens adaptor-related protein complex AP-4 mu4 subunit protein. Length = 453 Score = 34.3 bits (75), Expect = 0.56 Identities = 16/75 (21%), Positives = 39/75 (52%) Frame = +3 Query: 255 LYMLLITTKASNILEDLETLRLFSRVVPEYCVQLTETEVLNQAFNLLFAFDEIVALGYRE 434 LY+++ T++ + LE L + ++ +YC L E + + DE++ GY + Sbjct: 64 LYLVVTTSENVSPFSLLELLSRLATLLGDYCGSLGEGTISRNVALVYELLDEVLDYGYVQ 123 Query: 435 SVNLAQVRSFVEMDS 479 + + +R+F++ ++ Sbjct: 124 TTSTEMLRNFIQTEA 138 >AF020796-1|AAD25869.1| 453|Homo sapiens mu-adaptin-related protein 2 protein. Length = 453 Score = 34.3 bits (75), Expect = 0.56 Identities = 16/75 (21%), Positives = 39/75 (52%) Frame = +3 Query: 255 LYMLLITTKASNILEDLETLRLFSRVVPEYCVQLTETEVLNQAFNLLFAFDEIVALGYRE 434 LY+++ T++ + LE L + ++ +YC L E + + DE++ GY + Sbjct: 64 LYLVVTTSENVSPFSLLELLSRLATLLGDYCGSLGEGTISRNVALVYELLDEVLDYGYVQ 123 Query: 435 SVNLAQVRSFVEMDS 479 + + +R+F++ ++ Sbjct: 124 TTSTEMLRNFIQTEA 138 >BX640759-1|CAE45865.1| 192|Homo sapiens hypothetical protein protein. Length = 192 Score = 33.5 bits (73), Expect = 0.97 Identities = 16/75 (21%), Positives = 39/75 (52%) Frame = +3 Query: 255 LYMLLITTKASNILEDLETLRLFSRVVPEYCVQLTETEVLNQAFNLLFAFDEIVALGYRE 434 LY+++ T++ + LE L + ++ +YC L E + + DE++ GY + Sbjct: 49 LYLVVTTSENVSPFSLLELLSGLATLLGDYCGSLGEGTISRNVALVYELLDEVLDYGYVQ 108 Query: 435 SVNLAQVRSFVEMDS 479 + + +R+F++ ++ Sbjct: 109 TTSTEMLRNFIQTEA 123 >BC067812-1|AAH67812.1| 526|Homo sapiens cyclin L1 protein. Length = 526 Score = 31.5 bits (68), Expect = 3.9 Identities = 24/52 (46%), Positives = 29/52 (55%), Gaps = 1/52 (1%) Frame = +3 Query: 219 RVRQICLPATRQLYMLLITTKASNILED-LETLRLFSRVVPEYCVQLTETEV 371 R QI LP TR + LL T I E +ETLRL++R P Y +L E EV Sbjct: 255 RALQIPLP-TRPHWFLLFGTTEEEIQEICIETLRLYTRKKPNY--ELLEKEV 303 >BC007081-1|AAH07081.1| 526|Homo sapiens cyclin L1 protein. Length = 526 Score = 31.5 bits (68), Expect = 3.9 Identities = 24/52 (46%), Positives = 29/52 (55%), Gaps = 1/52 (1%) Frame = +3 Query: 219 RVRQICLPATRQLYMLLITTKASNILED-LETLRLFSRVVPEYCVQLTETEV 371 R QI LP TR + LL T I E +ETLRL++R P Y +L E EV Sbjct: 255 RALQIPLP-TRPHWFLLFGTTEEEIQEICIETLRLYTRKKPNY--ELLEKEV 303 >AY358663-1|AAQ89026.1| 299|Homo sapiens CCNL1 protein. Length = 299 Score = 31.5 bits (68), Expect = 3.9 Identities = 24/52 (46%), Positives = 29/52 (55%), Gaps = 1/52 (1%) Frame = +3 Query: 219 RVRQICLPATRQLYMLLITTKASNILED-LETLRLFSRVVPEYCVQLTETEV 371 R QI LP TR + LL T I E +ETLRL++R P Y +L E EV Sbjct: 28 RALQIPLP-TRPHWFLLFGTTEEEIQEICIETLRLYTRKKPNY--ELLEKEV 76 >AF180920-1|AAD53184.1| 526|Homo sapiens cyclin L ania-6a protein. Length = 526 Score = 31.5 bits (68), Expect = 3.9 Identities = 24/52 (46%), Positives = 29/52 (55%), Gaps = 1/52 (1%) Frame = +3 Query: 219 RVRQICLPATRQLYMLLITTKASNILED-LETLRLFSRVVPEYCVQLTETEV 371 R QI LP TR + LL T I E +ETLRL++R P Y +L E EV Sbjct: 255 RALQIPLP-TRPHWFLLFGTTEEEIQEICIETLRLYTRKKPNY--ELLEKEV 303 >BT007425-1|AAP36093.1| 513|Homo sapiens serine protease inhibitor, Kunitz type 1 protein. Length = 513 Score = 31.1 bits (67), Expect = 5.2 Identities = 13/36 (36%), Positives = 19/36 (52%) Frame = -1 Query: 756 CRGCRASWQNDPTVRVSLAGVVGNLLGNRFRWRRRD 649 CRG W DPT ++ + V G LGN+ + R + Sbjct: 259 CRGSFPRWYYDPTEQICKSFVYGGCLGNKNNYLREE 294 >BC018702-1|AAH18702.1| 513|Homo sapiens serine peptidase inhibitor, Kunitz type 1 protein. Length = 513 Score = 31.1 bits (67), Expect = 5.2 Identities = 13/36 (36%), Positives = 19/36 (52%) Frame = -1 Query: 756 CRGCRASWQNDPTVRVSLAGVVGNLLGNRFRWRRRD 649 CRG W DPT ++ + V G LGN+ + R + Sbjct: 259 CRGSFPRWYYDPTEQICKSFVYGGCLGNKNNYLREE 294 >BC004140-1|AAH04140.1| 513|Homo sapiens serine peptidase inhibitor, Kunitz type 1 protein. Length = 513 Score = 31.1 bits (67), Expect = 5.2 Identities = 13/36 (36%), Positives = 19/36 (52%) Frame = -1 Query: 756 CRGCRASWQNDPTVRVSLAGVVGNLLGNRFRWRRRD 649 CRG W DPT ++ + V G LGN+ + R + Sbjct: 259 CRGSFPRWYYDPTEQICKSFVYGGCLGNKNNYLREE 294 >AY358969-1|AAQ89328.1| 529|Homo sapiens HAI-1 protein. Length = 529 Score = 31.1 bits (67), Expect = 5.2 Identities = 13/36 (36%), Positives = 19/36 (52%) Frame = -1 Query: 756 CRGCRASWQNDPTVRVSLAGVVGNLLGNRFRWRRRD 649 CRG W DPT ++ + V G LGN+ + R + Sbjct: 259 CRGSFPRWYYDPTEQICKSFVYGGCLGNKNNYLREE 294 >AY296715-1|AAP44001.1| 529|Homo sapiens hepatocyte growth factor activator inhibitor 1B protein. Length = 529 Score = 31.1 bits (67), Expect = 5.2 Identities = 13/36 (36%), Positives = 19/36 (52%) Frame = -1 Query: 756 CRGCRASWQNDPTVRVSLAGVVGNLLGNRFRWRRRD 649 CRG W DPT ++ + V G LGN+ + R + Sbjct: 259 CRGSFPRWYYDPTEQICKSFVYGGCLGNKNNYLREE 294 >AB000095-1|BAA25014.1| 513|Homo sapiens hepatocyte growth factor activator inhibitor protein. Length = 513 Score = 31.1 bits (67), Expect = 5.2 Identities = 13/36 (36%), Positives = 19/36 (52%) Frame = -1 Query: 756 CRGCRASWQNDPTVRVSLAGVVGNLLGNRFRWRRRD 649 CRG W DPT ++ + V G LGN+ + R + Sbjct: 259 CRGSFPRWYYDPTEQICKSFVYGGCLGNKNNYLREE 294 Database: human Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 76,859,062 Number of sequences in database: 237,096 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 124,082,856 Number of Sequences: 237096 Number of extensions: 2642383 Number of successful extensions: 10246 Number of sequences better than 10.0: 20 Number of HSP's better than 10.0 without gapping: 10014 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 10244 length of database: 76,859,062 effective HSP length: 89 effective length of database: 55,757,518 effective search space used: 10593928420 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -