Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40099
         (840 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY051528-1|AAK92952.1|  532|Drosophila melanogaster GH18123p pro...   151   1e-36
AL024456-3|CAA19661.1|  531|Drosophila melanogaster EG:63B12.10 ...   151   1e-36
AF110234-1|AAF14250.1|  498|Drosophila melanogaster coatomer com...   151   1e-36
AE014298-266|AAF45673.1|  532|Drosophila melanogaster CG14813-PA...   151   1e-36
X95845-1|CAA65103.1|  398|Drosophila melanogaster tap protein.         34   0.28 
AY119146-1|AAM51006.1|  398|Drosophila melanogaster RE52048p pro...    34   0.28 
AF022883-1|AAC80572.1|  398|Drosophila melanogaster basic helix-...    34   0.28 
AE014296-2893|AAF49352.1|  398|Drosophila melanogaster CG7659-PA...    34   0.28 

>AY051528-1|AAK92952.1|  532|Drosophila melanogaster GH18123p
           protein.
          Length = 532

 Score =  151 bits (366), Expect = 1e-36
 Identities = 76/112 (67%), Positives = 92/112 (82%), Gaps = 2/112 (1%)
 Frame = +3

Query: 204 YICRNRVRQICLPATRQLYMLLITTKASNILEDLETLRLFSRVVPEYCVQLTETEVLNQA 383
           Y+  + VR +  P  + LYMLLITTKASNILEDLETLRLFS+V+PEY   L E E++  A
Sbjct: 48  YVETDSVRYVYQPMEK-LYMLLITTKASNILEDLETLRLFSKVIPEYSHSLDEKEIVENA 106

Query: 384 FNLLFAFDEIVALGYRESVNLAQVRSFVEMDSHEEKIYQAVR--GPKNARQR 533
           FNL+FAFDEIVALGYRESVNLAQ+++FVEMDSHEEK+YQAVR    ++ARQ+
Sbjct: 107 FNLIFAFDEIVALGYRESVNLAQIKTFVEMDSHEEKVYQAVRQTQERDARQK 158



 Score =  113 bits (271), Expect = 4e-25
 Identities = 51/62 (82%), Positives = 59/62 (95%)
 Frame = +1

Query: 67  MVLIAATVCTKSGKALVSRQFVEMTKARIEGLLAAFPKLMTGGRQHTFVETESVRYVYQP 246
           MVLIAA VCTK+GK ++SRQFVEMTKARIEGLLAAFPKLMT G+QHT+VET+SVRYVYQP
Sbjct: 1   MVLIAAAVCTKNGKVILSRQFVEMTKARIEGLLAAFPKLMTAGKQHTYVETDSVRYVYQP 60

Query: 247 LD 252
           ++
Sbjct: 61  ME 62


>AL024456-3|CAA19661.1|  531|Drosophila melanogaster EG:63B12.10
           protein.
          Length = 531

 Score =  151 bits (366), Expect = 1e-36
 Identities = 76/112 (67%), Positives = 92/112 (82%), Gaps = 2/112 (1%)
 Frame = +3

Query: 204 YICRNRVRQICLPATRQLYMLLITTKASNILEDLETLRLFSRVVPEYCVQLTETEVLNQA 383
           Y+  + VR +  P  + LYMLLITTKASNILEDLETLRLFS+V+PEY   L E E++  A
Sbjct: 48  YVETDSVRYVYQPMEK-LYMLLITTKASNILEDLETLRLFSKVIPEYSHSLDEKEIVENA 106

Query: 384 FNLLFAFDEIVALGYRESVNLAQVRSFVEMDSHEEKIYQAVR--GPKNARQR 533
           FNL+FAFDEIVALGYRESVNLAQ+++FVEMDSHEEK+YQAVR    ++ARQ+
Sbjct: 107 FNLIFAFDEIVALGYRESVNLAQIKTFVEMDSHEEKVYQAVRQTQERDARQK 158



 Score =  113 bits (271), Expect = 4e-25
 Identities = 51/62 (82%), Positives = 59/62 (95%)
 Frame = +1

Query: 67  MVLIAATVCTKSGKALVSRQFVEMTKARIEGLLAAFPKLMTGGRQHTFVETESVRYVYQP 246
           MVLIAA VCTK+GK ++SRQFVEMTKARIEGLLAAFPKLMT G+QHT+VET+SVRYVYQP
Sbjct: 1   MVLIAAAVCTKNGKVILSRQFVEMTKARIEGLLAAFPKLMTAGKQHTYVETDSVRYVYQP 60

Query: 247 LD 252
           ++
Sbjct: 61  ME 62


>AF110234-1|AAF14250.1|  498|Drosophila melanogaster coatomer
           complex COPI delta-COPsubunit protein.
          Length = 498

 Score =  151 bits (366), Expect = 1e-36
 Identities = 76/112 (67%), Positives = 92/112 (82%), Gaps = 2/112 (1%)
 Frame = +3

Query: 204 YICRNRVRQICLPATRQLYMLLITTKASNILEDLETLRLFSRVVPEYCVQLTETEVLNQA 383
           Y+  + VR +  P  + LYMLLITTKASNILEDLETLRLFS+V+PEY   L E E++  A
Sbjct: 15  YVETDSVRYVYQPMEK-LYMLLITTKASNILEDLETLRLFSKVIPEYSHSLDEKEIVENA 73

Query: 384 FNLLFAFDEIVALGYRESVNLAQVRSFVEMDSHEEKIYQAVR--GPKNARQR 533
           FNL+FAFDEIVALGYRESVNLAQ+++FVEMDSHEEK+YQAVR    ++ARQ+
Sbjct: 74  FNLIFAFDEIVALGYRESVNLAQIKTFVEMDSHEEKVYQAVRQTQERDARQK 125



 Score = 57.2 bits (132), Expect = 3e-08
 Identities = 23/29 (79%), Positives = 28/29 (96%)
 Frame = +1

Query: 166 AAFPKLMTGGRQHTFVETESVRYVYQPLD 252
           AAFPKLMT G+QHT+VET+SVRYVYQP++
Sbjct: 1   AAFPKLMTAGKQHTYVETDSVRYVYQPME 29


>AE014298-266|AAF45673.1|  532|Drosophila melanogaster CG14813-PA
           protein.
          Length = 532

 Score =  151 bits (366), Expect = 1e-36
 Identities = 76/112 (67%), Positives = 92/112 (82%), Gaps = 2/112 (1%)
 Frame = +3

Query: 204 YICRNRVRQICLPATRQLYMLLITTKASNILEDLETLRLFSRVVPEYCVQLTETEVLNQA 383
           Y+  + VR +  P  + LYMLLITTKASNILEDLETLRLFS+V+PEY   L E E++  A
Sbjct: 48  YVETDSVRYVYQPMEK-LYMLLITTKASNILEDLETLRLFSKVIPEYSHSLDEKEIVENA 106

Query: 384 FNLLFAFDEIVALGYRESVNLAQVRSFVEMDSHEEKIYQAVR--GPKNARQR 533
           FNL+FAFDEIVALGYRESVNLAQ+++FVEMDSHEEK+YQAVR    ++ARQ+
Sbjct: 107 FNLIFAFDEIVALGYRESVNLAQIKTFVEMDSHEEKVYQAVRQTQERDARQK 158



 Score =  113 bits (271), Expect = 4e-25
 Identities = 51/62 (82%), Positives = 59/62 (95%)
 Frame = +1

Query: 67  MVLIAATVCTKSGKALVSRQFVEMTKARIEGLLAAFPKLMTGGRQHTFVETESVRYVYQP 246
           MVLIAA VCTK+GK ++SRQFVEMTKARIEGLLAAFPKLMT G+QHT+VET+SVRYVYQP
Sbjct: 1   MVLIAAAVCTKNGKVILSRQFVEMTKARIEGLLAAFPKLMTAGKQHTYVETDSVRYVYQP 60

Query: 247 LD 252
           ++
Sbjct: 61  ME 62


>X95845-1|CAA65103.1|  398|Drosophila melanogaster tap protein.
          Length = 398

 Score = 33.9 bits (74), Expect = 0.28
 Identities = 18/59 (30%), Positives = 37/59 (62%)
 Frame = +3

Query: 288 NILEDLETLRLFSRVVPEYCVQLTETEVLNQAFNLLFAFDEIVALGYRESVNLAQVRSF 464
           N+ + LE LR+    +PE   +LT+ E+L  A N +FA ++++  G   +++L ++++F
Sbjct: 169 NLNDALEKLRVTLPSLPEE-TKLTKIEILRFAHNYIFALEQVLESGGSINLDLEKLQNF 226


>AY119146-1|AAM51006.1|  398|Drosophila melanogaster RE52048p
           protein.
          Length = 398

 Score = 33.9 bits (74), Expect = 0.28
 Identities = 18/59 (30%), Positives = 37/59 (62%)
 Frame = +3

Query: 288 NILEDLETLRLFSRVVPEYCVQLTETEVLNQAFNLLFAFDEIVALGYRESVNLAQVRSF 464
           N+ + LE LR+    +PE   +LT+ E+L  A N +FA ++++  G   +++L ++++F
Sbjct: 169 NLNDALEKLRVTLPSLPEE-TKLTKIEILRFAHNYIFALEQVLESGGSINLDLEKLQNF 226


>AF022883-1|AAC80572.1|  398|Drosophila melanogaster basic
           helix-loop-helix neuraltranscription factor BIPAROUS
           protein.
          Length = 398

 Score = 33.9 bits (74), Expect = 0.28
 Identities = 18/59 (30%), Positives = 37/59 (62%)
 Frame = +3

Query: 288 NILEDLETLRLFSRVVPEYCVQLTETEVLNQAFNLLFAFDEIVALGYRESVNLAQVRSF 464
           N+ + LE LR+    +PE   +LT+ E+L  A N +FA ++++  G   +++L ++++F
Sbjct: 169 NLNDALEKLRVTLPSLPEE-TKLTKIEILRFAHNYIFALEQVLESGGSINLDLEKLQNF 226


>AE014296-2893|AAF49352.1|  398|Drosophila melanogaster CG7659-PA
           protein.
          Length = 398

 Score = 33.9 bits (74), Expect = 0.28
 Identities = 18/59 (30%), Positives = 37/59 (62%)
 Frame = +3

Query: 288 NILEDLETLRLFSRVVPEYCVQLTETEVLNQAFNLLFAFDEIVALGYRESVNLAQVRSF 464
           N+ + LE LR+    +PE   +LT+ E+L  A N +FA ++++  G   +++L ++++F
Sbjct: 169 NLNDALEKLRVTLPSLPEE-TKLTKIEILRFAHNYIFALEQVLESGGSINLDLEKLQNF 226


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 38,059,066
Number of Sequences: 53049
Number of extensions: 808435
Number of successful extensions: 2386
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2165
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2386
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4003789140
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)