Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40098
         (858 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   2.3  
AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase ...    23   3.1  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    23   3.1  
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    22   5.4  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    22   5.4  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    22   7.1  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   9.4  
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    21   9.4  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 12/37 (32%), Positives = 19/37 (51%)
 Frame = -3

Query: 652 LCLFINFSAYFKYLGHLFSLSNMYYVSHISFYLVHTL 542
           LC++  + A+  +  HL  L  +YY     FY +H L
Sbjct: 236 LCIYYFYYAFILFTVHLLLLVCIYY-----FYYMHLL 267



 Score = 22.6 bits (46), Expect = 4.1
 Identities = 13/42 (30%), Positives = 22/42 (52%)
 Frame = -3

Query: 652 LCLFINFSAYFKYLGHLFSLSNMYYVSHISFYLVHTLIY*FF 527
           LC++  + A+  +  HL  L  +YY     F+L+   IY F+
Sbjct: 111 LCVYYFYYAFIIFTVHLLFLLCIYYFVVPLFFLL--CIYYFY 150



 Score = 21.8 bits (44), Expect = 7.1
 Identities = 8/28 (28%), Positives = 16/28 (57%)
 Frame = -3

Query: 661 YFHLCLFINFSAYFKYLGHLFSLSNMYY 578
           +F LC++  + A+  +  HL  L  +Y+
Sbjct: 141 FFLLCIYYFYCAFIIFTVHLLFLLCIYH 168


>AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase
           protein.
          Length = 268

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 9/27 (33%), Positives = 17/27 (62%)
 Frame = -3

Query: 691 KNNRK*ASKKYFHLCLFINFSAYFKYL 611
           K+ +K  +KK +  C+++ F   F+YL
Sbjct: 112 KDKKKIRAKKRWSQCMYMYFLLGFRYL 138


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 9/27 (33%), Positives = 17/27 (62%)
 Frame = -3

Query: 691 KNNRK*ASKKYFHLCLFINFSAYFKYL 611
           K+ +K  +KK +  C+++ F   F+YL
Sbjct: 426 KDKKKIRAKKRWSQCMYMYFLLGFRYL 452


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 14/46 (30%), Positives = 24/46 (52%)
 Frame = -2

Query: 215 WMKYNLSKMMVIY*DCLSGLFGGSREVTSSGFVSFSHICALSQILN 78
           ++ YNLS  + +  D ++ LF        +  VS   I +LSQ+L+
Sbjct: 184 FLTYNLSLGIKLRYDDVNNLFRIEESEEKNIIVSLRQIGSLSQLLS 229


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 14/46 (30%), Positives = 24/46 (52%)
 Frame = -2

Query: 215 WMKYNLSKMMVIY*DCLSGLFGGSREVTSSGFVSFSHICALSQILN 78
           ++ YNLS  + +  D ++ LF        +  VS   I +LSQ+L+
Sbjct: 184 FLTYNLSLGIKLRYDDVNNLFRIEESEEKNIIVSLRQIGSLSQLLS 229


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 7/18 (38%), Positives = 10/18 (55%)
 Frame = -1

Query: 819 FNPVXPWFLQXGNGIWXP 766
           ++ V  W+L  G G W P
Sbjct: 457 YSTVGHWYLDCGFGPWKP 474


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = -2

Query: 122 FVSFSHICALSQILN 78
           F+SFS IC L Q L+
Sbjct: 220 FISFSKICYLHQHLS 234


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = -2

Query: 122 FVSFSHICALSQILN 78
           F+SFS IC L Q L+
Sbjct: 238 FISFSKICYLHQHLS 252


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 195,355
Number of Sequences: 336
Number of extensions: 4261
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23763101
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)