Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40097
         (845 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A6LZR3 Cluster: Putative uncharacterized protein; n=1; ...    35   2.2  
UniRef50_Q287C6 Cluster: IE-1; n=1; Agrotis segetum nucleopolyhe...    33   6.8  
UniRef50_A0NS35 Cluster: Penicillin-insensitive murein endopepti...    33   9.0  

>UniRef50_A6LZR3 Cluster: Putative uncharacterized protein; n=1;
           Clostridium beijerinckii NCIMB 8052|Rep: Putative
           uncharacterized protein - Clostridium beijerinckii NCIMB
           8052
          Length = 177

 Score = 35.1 bits (77), Expect = 2.2
 Identities = 22/67 (32%), Positives = 36/67 (53%)
 Frame = +1

Query: 388 FWCFGFKFAIKNLISRGDKVFGLSDIFGTLQESHLKF*NLEKYLKQKNFFSFVFECSKHN 567
           F+ F  K   ++L  R  +++G + +  T + +HLKF  +EK +K    FS       HN
Sbjct: 64  FFFFRKKIFNRSLRRRFLRIYGTNKLTDTFETTHLKF--IEKGIKTNTRFSEKI----HN 117

Query: 568 WSSIKNI 588
           W+SIK +
Sbjct: 118 WNSIKGL 124


>UniRef50_Q287C6 Cluster: IE-1; n=1; Agrotis segetum
           nucleopolyhedrovirus|Rep: IE-1 - Agrotis segetum nuclear
           polyhedrosis virus (AsNPV)
          Length = 661

 Score = 33.5 bits (73), Expect = 6.8
 Identities = 25/87 (28%), Positives = 38/87 (43%), Gaps = 1/87 (1%)
 Frame = -1

Query: 464 MSLNPKTLSPLDIRFLMANLKPKHQKQF*KHSCIFLKMSPVHICSRSLFTDRTPASYASL 285
           MS  P T  P+      A +KPK + ++ K  CI   M PVH+   +     T   +  +
Sbjct: 204 MSARPDTPPPV-----RAIIKPKTRGRYAKKMCIESAMKPVHVAVPTTIDPATETLFRDI 258

Query: 284 VLLKNQYSIVASMN-LFTSL*VFVSSY 207
           +L       +  MN +FTS  +  S Y
Sbjct: 259 ILAHPGVDTLPQMNRMFTSHMLDTSHY 285


>UniRef50_A0NS35 Cluster: Penicillin-insensitive murein
           endopeptidase; n=3; Alphaproteobacteria|Rep:
           Penicillin-insensitive murein endopeptidase - Stappia
           aggregata IAM 12614
          Length = 380

 Score = 33.1 bits (72), Expect = 9.0
 Identities = 12/29 (41%), Positives = 13/29 (44%)
 Frame = +2

Query: 8   WWGSHYAIETRTSCLKAANSCTQINTKVP 94
           WWG HY    R SC K +  C   N   P
Sbjct: 299 WWGHHYHFHVRLSCPKGSAGCENQNPPPP 327


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 840,099,498
Number of Sequences: 1657284
Number of extensions: 16567996
Number of successful extensions: 33601
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 32430
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33595
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 74193458591
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)