Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40097
         (845 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK000703-1|BAA91330.1|  993|Homo sapiens protein ( Homo sapiens ...    31   6.9  
AB046771-1|BAB13377.1| 1249|Homo sapiens KIAA1551 protein protein.     31   6.9  

>AK000703-1|BAA91330.1|  993|Homo sapiens protein ( Homo sapiens
           cDNA FLJ20696 fis, clone KAIA2488. ).
          Length = 993

 Score = 30.7 bits (66), Expect = 6.9
 Identities = 22/57 (38%), Positives = 27/57 (47%), Gaps = 3/57 (5%)
 Frame = -2

Query: 778 GNLKNGKNCENPSTTAVSGQHLKRAFL---YRGVKRCFVLSDISLSTRHLSL*LKVW 617
           GN  N KN E PST+ VSG+ L  +F        K     SD S S   L+  L +W
Sbjct: 322 GNQLNLKNMETPSTSNVSGRVLDNSFCSGQESSTKGMPAKSDSSCSMEVLATCLSLW 378


>AB046771-1|BAB13377.1| 1249|Homo sapiens KIAA1551 protein protein.
          Length = 1249

 Score = 30.7 bits (66), Expect = 6.9
 Identities = 22/57 (38%), Positives = 27/57 (47%), Gaps = 3/57 (5%)
 Frame = -2

Query: 778 GNLKNGKNCENPSTTAVSGQHLKRAFL---YRGVKRCFVLSDISLSTRHLSL*LKVW 617
           GN  N KN E PST+ VSG+ L  +F        K     SD S S   L+  L +W
Sbjct: 458 GNQLNLKNMETPSTSNVSGRVLDNSFCSGQESSTKGMPAKSDSSCSMEVLATCLSLW 514


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 123,001,060
Number of Sequences: 237096
Number of extensions: 2520275
Number of successful extensions: 4078
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 3921
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4078
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10705443456
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)