Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40096
(823 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ850292-1|CAH64512.1| 539|Tribolium castaneum putative esteras... 25 0.73
AM292357-1|CAL23169.2| 355|Tribolium castaneum gustatory recept... 24 1.3
AJ850297-1|CAH64517.1| 539|Tribolium castaneum putative esteras... 23 2.2
AJ850295-1|CAH64515.1| 539|Tribolium castaneum putative esteras... 23 2.2
AJ850294-1|CAH64514.1| 539|Tribolium castaneum putative esteras... 23 2.2
U77974-1|AAB36556.1| 276|Tribolium castaneum transcription fact... 23 2.9
AJ850293-1|CAH64513.1| 539|Tribolium castaneum putative esteras... 23 2.9
EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic acetyl... 21 8.9
EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic acetyl... 21 8.9
EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic acetyl... 21 8.9
EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic acetyl... 21 8.9
EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic acetyl... 21 8.9
>AJ850292-1|CAH64512.1| 539|Tribolium castaneum putative esterase
protein.
Length = 539
Score = 25.0 bits (52), Expect = 0.73
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +2
Query: 296 IRKYCLGDKPVSIELLSDQIKNFSRTVNYED 388
IRKY LG+K +S + D + FS + D
Sbjct: 370 IRKYYLGEKKLSKKTFRDLVAMFSDRIFIND 400
>AM292357-1|CAL23169.2| 355|Tribolium castaneum gustatory receptor
candidate 36 protein.
Length = 355
Score = 24.2 bits (50), Expect = 1.3
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -1
Query: 823 LFNSPSMGQIGLSCSGPHTTV*KLVALLLEY 731
LFN+ + ++CSG H+ KLV + EY
Sbjct: 265 LFNTFGTILLIMTCSGVHSESQKLVGVCYEY 295
>AJ850297-1|CAH64517.1| 539|Tribolium castaneum putative esterase
protein.
Length = 539
Score = 23.4 bits (48), Expect = 2.2
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +2
Query: 296 IRKYCLGDKPVSIELLSDQIKNFSRTVNYED 388
IRKY LG+K +S + + + FS + D
Sbjct: 370 IRKYYLGEKKLSKKTFRELVAMFSDRIFIND 400
>AJ850295-1|CAH64515.1| 539|Tribolium castaneum putative esterase
protein.
Length = 539
Score = 23.4 bits (48), Expect = 2.2
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +2
Query: 296 IRKYCLGDKPVSIELLSDQIKNFSRTVNYED 388
IRKY LG+K +S + + + FS + D
Sbjct: 370 IRKYYLGEKKLSKKTFRELVAMFSDRIFIND 400
>AJ850294-1|CAH64514.1| 539|Tribolium castaneum putative esterase
protein.
Length = 539
Score = 23.4 bits (48), Expect = 2.2
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +2
Query: 296 IRKYCLGDKPVSIELLSDQIKNFSRTVNYED 388
IRKY LG+K +S + + + FS + D
Sbjct: 370 IRKYYLGEKKLSKKTFRELVTMFSDRIFIND 400
>U77974-1|AAB36556.1| 276|Tribolium castaneum transcription factor
homolog protein.
Length = 276
Score = 23.0 bits (47), Expect = 2.9
Identities = 7/12 (58%), Positives = 10/12 (83%)
Frame = -3
Query: 776 PPHYSLKVGSTP 741
PPHY++ G+TP
Sbjct: 24 PPHYNIHHGATP 35
>AJ850293-1|CAH64513.1| 539|Tribolium castaneum putative esterase
protein.
Length = 539
Score = 23.0 bits (47), Expect = 2.9
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = +2
Query: 296 IRKYCLGDKPVSIELLSDQIKNFSRTVNYED 388
IRKY LG+K +S + + FS + D
Sbjct: 370 IRKYYLGEKKLSKRTFRELVAMFSDRIFIND 400
>EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
5 protein.
Length = 311
Score = 21.4 bits (43), Expect = 8.9
Identities = 7/17 (41%), Positives = 13/17 (76%)
Frame = -2
Query: 81 TLKCRSQSLFYLYNSIM 31
T+K R ++L+Y +N I+
Sbjct: 204 TIKIRRRTLYYFFNLIV 220
>EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
4 protein.
Length = 311
Score = 21.4 bits (43), Expect = 8.9
Identities = 7/17 (41%), Positives = 13/17 (76%)
Frame = -2
Query: 81 TLKCRSQSLFYLYNSIM 31
T+K R ++L+Y +N I+
Sbjct: 204 TIKIRRRTLYYFFNLIV 220
>EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
3 protein.
Length = 311
Score = 21.4 bits (43), Expect = 8.9
Identities = 7/17 (41%), Positives = 13/17 (76%)
Frame = -2
Query: 81 TLKCRSQSLFYLYNSIM 31
T+K R ++L+Y +N I+
Sbjct: 204 TIKIRRRTLYYFFNLIV 220
>EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
2 protein.
Length = 311
Score = 21.4 bits (43), Expect = 8.9
Identities = 7/17 (41%), Positives = 13/17 (76%)
Frame = -2
Query: 81 TLKCRSQSLFYLYNSIM 31
T+K R ++L+Y +N I+
Sbjct: 204 TIKIRRRTLYYFFNLIV 220
>EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
1 protein.
Length = 311
Score = 21.4 bits (43), Expect = 8.9
Identities = 7/17 (41%), Positives = 13/17 (76%)
Frame = -2
Query: 81 TLKCRSQSLFYLYNSIM 31
T+K R ++L+Y +N I+
Sbjct: 204 TIKIRRRTLYYFFNLIV 220
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 201,152
Number of Sequences: 336
Number of extensions: 4405
Number of successful extensions: 15
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22517873
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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