Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40096
(823 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U37359-1|AAC78721.1| 680|Homo sapiens MRE11 homologue hMre11 pr... 128 3e-29
BT006730-1|AAP35376.1| 206|Homo sapiens MRE11 meiotic recombina... 128 3e-29
BC063458-1|AAH63458.1| 708|Homo sapiens MRE11 meiotic recombina... 128 3e-29
BC017823-1|AAH17823.1| 517|Homo sapiens Unknown (protein for IM... 128 3e-29
BC005241-1|AAH05241.1| 206|Homo sapiens MRE11A protein protein. 128 3e-29
AY584241-1|AAS79320.1| 708|Homo sapiens MRE11 meiotic recombina... 128 3e-29
AF303395-1|AAK18790.1| 708|Homo sapiens meiotic recombination 1... 128 3e-29
AF073362-1|AAC36249.1| 708|Homo sapiens endo/exonuclease Mre11 ... 128 3e-29
AF022778-1|AAD10197.1| 708|Homo sapiens DNA recombination and r... 128 3e-29
U42408-1|AAB58817.1| 517|Homo sapiens ladinin protein. 30 8.8
BC071890-1|AAH71890.1| 517|Homo sapiens ladinin 1 protein. 30 8.8
BC009742-1|AAH09742.1| 517|Homo sapiens ladinin 1 protein. 30 8.8
>U37359-1|AAC78721.1| 680|Homo sapiens MRE11 homologue hMre11
protein.
Length = 680
Score = 128 bits (308), Expect = 3e-29
Identities = 64/140 (45%), Positives = 83/140 (59%), Gaps = 4/140 (2%)
Frame = +2
Query: 257 KPSVNCMFKCTEIIRKYCLGDKPVSIELLSDQIKNFSRT----VNYEDPNLNISYPILSI 424
KPS + C E++RKYC+GD+PV E+LSDQ NF + VNY+D NLNIS P+ SI
Sbjct: 66 KPSRKTLHTCLELLRKYCMGDRPVQFEILSDQSVNFGFSKFPWVNYQDGNLNISIPVFSI 125
Query: 425 HGNHDDPVGQGSVSSLDILSITGLVNYFVNGPTTRT*EYHQYFCKKVLRGSPSMGLSHLK 604
HGNHDDP G ++ +LDILS G VN+F + + +K GL +
Sbjct: 126 HGNHDDPTGADALCALDILSCAGFVNHFGRSMSVEKIDISPVLLQKGSTKIALYGLGSIP 185
Query: 605 DQRLSRLFAEKKVEMERPDE 664
D+RL R+F KKV M RP E
Sbjct: 186 DERLYRMFVNKKVTMLRPKE 205
Score = 74.1 bits (174), Expect = 5e-13
Identities = 32/59 (54%), Positives = 44/59 (74%)
Frame = +3
Query: 78 AWSPDDTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQ 254
A ++T +IL+A+DIHLGFME D RG D+F+ +E+L LA + +VD ILLGGDLF +
Sbjct: 6 ALDDENTFKILVATDIHLGFMEKDAARGNDTFVTLDEILRLAQENEVDFILLGGDLFHE 64
Score = 56.4 bits (130), Expect = 1e-07
Identities = 30/76 (39%), Positives = 42/76 (55%)
Frame = +1
Query: 532 VRISPVLLQKGLTRLALYGT*PFKRSETFTSFC*KKSGNGETR*NIGTGFHLFVLHPNHA 711
+ ISPVLLQKG T++ALYG + F KK + + + F+LFV+H N +
Sbjct: 162 IDISPVLLQKGSTKIALYGLGSIPDERLYRMFVNKKVTMLRPKEDENSWFNLFVIHQNRS 221
Query: 712 DRGHSNYIPEGVLPTF 759
G +N+IPE L F
Sbjct: 222 KHGSTNFIPEQFLDDF 237
>BT006730-1|AAP35376.1| 206|Homo sapiens MRE11 meiotic
recombination 11 homolog A (S. cerevisiae) protein.
Length = 206
Score = 128 bits (308), Expect = 3e-29
Identities = 64/140 (45%), Positives = 83/140 (59%), Gaps = 4/140 (2%)
Frame = +2
Query: 257 KPSVNCMFKCTEIIRKYCLGDKPVSIELLSDQIKNFSRT----VNYEDPNLNISYPILSI 424
KPS + C E++RKYC+GD+PV E+LSDQ NF + VNY+D NLNIS P+ SI
Sbjct: 66 KPSRKTLHTCLELLRKYCMGDRPVQFEILSDQSVNFGFSKFPWVNYQDGNLNISIPVFSI 125
Query: 425 HGNHDDPVGQGSVSSLDILSITGLVNYFVNGPTTRT*EYHQYFCKKVLRGSPSMGLSHLK 604
HGNHDDP G ++ +LDILS G VN+F + + +K GL +
Sbjct: 126 HGNHDDPTGADALCALDILSCAGFVNHFGRSMSVEKIDISPVLLQKGSTKIALYGLGSIP 185
Query: 605 DQRLSRLFAEKKVEMERPDE 664
D+RL R+F KKV M RP E
Sbjct: 186 DERLYRMFVNKKVTMLRPKE 205
Score = 75.8 bits (178), Expect = 2e-13
Identities = 33/59 (55%), Positives = 45/59 (76%)
Frame = +3
Query: 78 AWSPDDTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQ 254
A ++T +IL+A+DIHLGFME D VRG D+F+ +E+L LA + +VD ILLGGDLF +
Sbjct: 6 ALDDENTFKILVATDIHLGFMEKDAVRGNDTFVTLDEILRLAQENEVDFILLGGDLFHE 64
>BC063458-1|AAH63458.1| 708|Homo sapiens MRE11 meiotic
recombination 11 homolog A (S. cerevisiae) protein.
Length = 708
Score = 128 bits (308), Expect = 3e-29
Identities = 64/140 (45%), Positives = 83/140 (59%), Gaps = 4/140 (2%)
Frame = +2
Query: 257 KPSVNCMFKCTEIIRKYCLGDKPVSIELLSDQIKNFSRT----VNYEDPNLNISYPILSI 424
KPS + C E++RKYC+GD+PV E+LSDQ NF + VNY+D NLNIS P+ SI
Sbjct: 66 KPSRKTLHTCLELLRKYCMGDRPVQFEILSDQSVNFGFSKFPWVNYQDGNLNISIPVFSI 125
Query: 425 HGNHDDPVGQGSVSSLDILSITGLVNYFVNGPTTRT*EYHQYFCKKVLRGSPSMGLSHLK 604
HGNHDDP G ++ +LDILS G VN+F + + +K GL +
Sbjct: 126 HGNHDDPTGADALCALDILSCAGFVNHFGRSMSVEKIDISPVLLQKGSTKIALYGLGSIP 185
Query: 605 DQRLSRLFAEKKVEMERPDE 664
D+RL R+F KKV M RP E
Sbjct: 186 DERLYRMFVNKKVTMLRPKE 205
Score = 75.8 bits (178), Expect = 2e-13
Identities = 33/59 (55%), Positives = 45/59 (76%)
Frame = +3
Query: 78 AWSPDDTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQ 254
A ++T +IL+A+DIHLGFME D VRG D+F+ +E+L LA + +VD ILLGGDLF +
Sbjct: 6 ALDDENTFKILVATDIHLGFMEKDAVRGNDTFVTLDEILRLAQENEVDFILLGGDLFHE 64
Score = 56.4 bits (130), Expect = 1e-07
Identities = 30/76 (39%), Positives = 42/76 (55%)
Frame = +1
Query: 532 VRISPVLLQKGLTRLALYGT*PFKRSETFTSFC*KKSGNGETR*NIGTGFHLFVLHPNHA 711
+ ISPVLLQKG T++ALYG + F KK + + + F+LFV+H N +
Sbjct: 162 IDISPVLLQKGSTKIALYGLGSIPDERLYRMFVNKKVTMLRPKEDENSWFNLFVIHQNRS 221
Query: 712 DRGHSNYIPEGVLPTF 759
G +N+IPE L F
Sbjct: 222 KHGSTNFIPEQFLDDF 237
>BC017823-1|AAH17823.1| 517|Homo sapiens Unknown (protein for
IMAGE:4687479) protein.
Length = 517
Score = 128 bits (308), Expect = 3e-29
Identities = 64/140 (45%), Positives = 83/140 (59%), Gaps = 4/140 (2%)
Frame = +2
Query: 257 KPSVNCMFKCTEIIRKYCLGDKPVSIELLSDQIKNFSRT----VNYEDPNLNISYPILSI 424
KPS + C E++RKYC+GD+PV E+LSDQ NF + VNY+D NLNIS P+ SI
Sbjct: 66 KPSRKTLHTCLELLRKYCMGDRPVQFEILSDQSVNFGFSKFPWVNYQDGNLNISIPVFSI 125
Query: 425 HGNHDDPVGQGSVSSLDILSITGLVNYFVNGPTTRT*EYHQYFCKKVLRGSPSMGLSHLK 604
HGNHDDP G ++ +LDILS G VN+F + + +K GL +
Sbjct: 126 HGNHDDPTGADALCALDILSCAGFVNHFGRSMSVEKIDISPVLLQKGSTKIALYGLGSIP 185
Query: 605 DQRLSRLFAEKKVEMERPDE 664
D+RL R+F KKV M RP E
Sbjct: 186 DERLYRMFVNKKVTMLRPKE 205
Score = 75.8 bits (178), Expect = 2e-13
Identities = 33/59 (55%), Positives = 45/59 (76%)
Frame = +3
Query: 78 AWSPDDTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQ 254
A ++T +IL+A+DIHLGFME D VRG D+F+ +E+L LA + +VD ILLGGDLF +
Sbjct: 6 ALDDENTFKILVATDIHLGFMEKDAVRGNDTFVTLDEILRLAQENEVDFILLGGDLFHE 64
Score = 56.4 bits (130), Expect = 1e-07
Identities = 30/76 (39%), Positives = 42/76 (55%)
Frame = +1
Query: 532 VRISPVLLQKGLTRLALYGT*PFKRSETFTSFC*KKSGNGETR*NIGTGFHLFVLHPNHA 711
+ ISPVLLQKG T++ALYG + F KK + + + F+LFV+H N +
Sbjct: 162 IDISPVLLQKGSTKIALYGLGSIPDERLYRMFVNKKVTMLRPKEDENSWFNLFVIHQNRS 221
Query: 712 DRGHSNYIPEGVLPTF 759
G +N+IPE L F
Sbjct: 222 KHGSTNFIPEQFLDDF 237
>BC005241-1|AAH05241.1| 206|Homo sapiens MRE11A protein protein.
Length = 206
Score = 128 bits (308), Expect = 3e-29
Identities = 64/140 (45%), Positives = 83/140 (59%), Gaps = 4/140 (2%)
Frame = +2
Query: 257 KPSVNCMFKCTEIIRKYCLGDKPVSIELLSDQIKNFSRT----VNYEDPNLNISYPILSI 424
KPS + C E++RKYC+GD+PV E+LSDQ NF + VNY+D NLNIS P+ SI
Sbjct: 66 KPSRKTLHTCLELLRKYCMGDRPVQFEILSDQSVNFGFSKFPWVNYQDGNLNISIPVFSI 125
Query: 425 HGNHDDPVGQGSVSSLDILSITGLVNYFVNGPTTRT*EYHQYFCKKVLRGSPSMGLSHLK 604
HGNHDDP G ++ +LDILS G VN+F + + +K GL +
Sbjct: 126 HGNHDDPTGADALCALDILSCAGFVNHFGRSMSVEKIDISPVLLQKGSTKIALYGLGSIP 185
Query: 605 DQRLSRLFAEKKVEMERPDE 664
D+RL R+F KKV M RP E
Sbjct: 186 DERLYRMFVNKKVTMLRPKE 205
Score = 75.8 bits (178), Expect = 2e-13
Identities = 33/59 (55%), Positives = 45/59 (76%)
Frame = +3
Query: 78 AWSPDDTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQ 254
A ++T +IL+A+DIHLGFME D VRG D+F+ +E+L LA + +VD ILLGGDLF +
Sbjct: 6 ALDDENTFKILVATDIHLGFMEKDAVRGNDTFVTLDEILRLAQENEVDFILLGGDLFHE 64
>AY584241-1|AAS79320.1| 708|Homo sapiens MRE11 meiotic
recombination 11 homolog A (S. cerevisiae) protein.
Length = 708
Score = 128 bits (308), Expect = 3e-29
Identities = 64/140 (45%), Positives = 83/140 (59%), Gaps = 4/140 (2%)
Frame = +2
Query: 257 KPSVNCMFKCTEIIRKYCLGDKPVSIELLSDQIKNFSRT----VNYEDPNLNISYPILSI 424
KPS + C E++RKYC+GD+PV E+LSDQ NF + VNY+D NLNIS P+ SI
Sbjct: 66 KPSRKTLHTCLELLRKYCMGDRPVQFEILSDQSVNFGFSKFPWVNYQDGNLNISIPVFSI 125
Query: 425 HGNHDDPVGQGSVSSLDILSITGLVNYFVNGPTTRT*EYHQYFCKKVLRGSPSMGLSHLK 604
HGNHDDP G ++ +LDILS G VN+F + + +K GL +
Sbjct: 126 HGNHDDPTGADALCALDILSCAGFVNHFGRSMSVEKIDISPVLLQKGSTKIALYGLGSIP 185
Query: 605 DQRLSRLFAEKKVEMERPDE 664
D+RL R+F KKV M RP E
Sbjct: 186 DERLYRMFVNKKVTMLRPKE 205
Score = 75.8 bits (178), Expect = 2e-13
Identities = 33/59 (55%), Positives = 45/59 (76%)
Frame = +3
Query: 78 AWSPDDTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQ 254
A ++T +IL+A+DIHLGFME D VRG D+F+ +E+L LA + +VD ILLGGDLF +
Sbjct: 6 ALDDENTFKILVATDIHLGFMEKDAVRGNDTFVTLDEILRLAQENEVDFILLGGDLFHE 64
Score = 56.4 bits (130), Expect = 1e-07
Identities = 30/76 (39%), Positives = 42/76 (55%)
Frame = +1
Query: 532 VRISPVLLQKGLTRLALYGT*PFKRSETFTSFC*KKSGNGETR*NIGTGFHLFVLHPNHA 711
+ ISPVLLQKG T++ALYG + F KK + + + F+LFV+H N +
Sbjct: 162 IDISPVLLQKGSTKIALYGLGSIPDERLYRMFVNKKVTMLRPKEDENSWFNLFVIHQNRS 221
Query: 712 DRGHSNYIPEGVLPTF 759
G +N+IPE L F
Sbjct: 222 KHGSTNFIPEQFLDDF 237
>AF303395-1|AAK18790.1| 708|Homo sapiens meiotic recombination 11
protein.
Length = 708
Score = 128 bits (308), Expect = 3e-29
Identities = 64/140 (45%), Positives = 83/140 (59%), Gaps = 4/140 (2%)
Frame = +2
Query: 257 KPSVNCMFKCTEIIRKYCLGDKPVSIELLSDQIKNFSRT----VNYEDPNLNISYPILSI 424
KPS + C E++RKYC+GD+PV E+LSDQ NF + VNY+D NLNIS P+ SI
Sbjct: 66 KPSRKTLHTCLELLRKYCMGDRPVQFEILSDQSVNFGFSKFPWVNYQDGNLNISIPVFSI 125
Query: 425 HGNHDDPVGQGSVSSLDILSITGLVNYFVNGPTTRT*EYHQYFCKKVLRGSPSMGLSHLK 604
HGNHDDP G ++ +LDILS G VN+F + + +K GL +
Sbjct: 126 HGNHDDPTGADALCALDILSCAGFVNHFGRSMSVEKIDISPVLLQKGSTKIALYGLGSIP 185
Query: 605 DQRLSRLFAEKKVEMERPDE 664
D+RL R+F KKV M RP E
Sbjct: 186 DERLYRMFVNKKVTMLRPKE 205
Score = 75.8 bits (178), Expect = 2e-13
Identities = 33/59 (55%), Positives = 45/59 (76%)
Frame = +3
Query: 78 AWSPDDTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQ 254
A ++T +IL+A+DIHLGFME D VRG D+F+ +E+L LA + +VD ILLGGDLF +
Sbjct: 6 ALDDENTFKILVATDIHLGFMEKDAVRGNDTFVTLDEILRLAQENEVDFILLGGDLFHE 64
Score = 56.4 bits (130), Expect = 1e-07
Identities = 30/76 (39%), Positives = 42/76 (55%)
Frame = +1
Query: 532 VRISPVLLQKGLTRLALYGT*PFKRSETFTSFC*KKSGNGETR*NIGTGFHLFVLHPNHA 711
+ ISPVLLQKG T++ALYG + F KK + + + F+LFV+H N +
Sbjct: 162 IDISPVLLQKGSTKIALYGLGSIPDERLYRMFVNKKVTMLRPKEDENSWFNLFVIHQNRS 221
Query: 712 DRGHSNYIPEGVLPTF 759
G +N+IPE L F
Sbjct: 222 KHGSTNFIPEQFLDDF 237
>AF073362-1|AAC36249.1| 708|Homo sapiens endo/exonuclease Mre11
protein.
Length = 708
Score = 128 bits (308), Expect = 3e-29
Identities = 64/140 (45%), Positives = 83/140 (59%), Gaps = 4/140 (2%)
Frame = +2
Query: 257 KPSVNCMFKCTEIIRKYCLGDKPVSIELLSDQIKNFSRT----VNYEDPNLNISYPILSI 424
KPS + C E++RKYC+GD+PV E+LSDQ NF + VNY+D NLNIS P+ SI
Sbjct: 66 KPSRKTLHTCLELLRKYCMGDRPVQFEILSDQSVNFGFSKFPWVNYQDGNLNISIPVFSI 125
Query: 425 HGNHDDPVGQGSVSSLDILSITGLVNYFVNGPTTRT*EYHQYFCKKVLRGSPSMGLSHLK 604
HGNHDDP G ++ +LDILS G VN+F + + +K GL +
Sbjct: 126 HGNHDDPTGADALCALDILSCAGFVNHFGRSMSVEKIDISPVLLQKGSTKIALYGLGSIP 185
Query: 605 DQRLSRLFAEKKVEMERPDE 664
D+RL R+F KKV M RP E
Sbjct: 186 DERLYRMFVNKKVTMLRPKE 205
Score = 75.8 bits (178), Expect = 2e-13
Identities = 33/59 (55%), Positives = 45/59 (76%)
Frame = +3
Query: 78 AWSPDDTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQ 254
A ++T +IL+A+DIHLGFME D VRG D+F+ +E+L LA + +VD ILLGGDLF +
Sbjct: 6 ALDDENTFKILVATDIHLGFMEKDAVRGNDTFVTLDEILRLAQENEVDFILLGGDLFHE 64
Score = 56.4 bits (130), Expect = 1e-07
Identities = 30/76 (39%), Positives = 42/76 (55%)
Frame = +1
Query: 532 VRISPVLLQKGLTRLALYGT*PFKRSETFTSFC*KKSGNGETR*NIGTGFHLFVLHPNHA 711
+ ISPVLLQKG T++ALYG + F KK + + + F+LFV+H N +
Sbjct: 162 IDISPVLLQKGSTKIALYGLGSIPDERLYRMFVNKKVTMLRPKEDENSWFNLFVIHQNRS 221
Query: 712 DRGHSNYIPEGVLPTF 759
G +N+IPE L F
Sbjct: 222 KHGSTNFIPEQFLDDF 237
>AF022778-1|AAD10197.1| 708|Homo sapiens DNA recombination and
repair protein protein.
Length = 708
Score = 128 bits (308), Expect = 3e-29
Identities = 64/140 (45%), Positives = 83/140 (59%), Gaps = 4/140 (2%)
Frame = +2
Query: 257 KPSVNCMFKCTEIIRKYCLGDKPVSIELLSDQIKNFSRT----VNYEDPNLNISYPILSI 424
KPS + C E++RKYC+GD+PV E+LSDQ NF + VNY+D NLNIS P+ SI
Sbjct: 66 KPSRKTLHTCLELLRKYCMGDRPVQFEILSDQSVNFGFSKFPWVNYQDGNLNISIPVFSI 125
Query: 425 HGNHDDPVGQGSVSSLDILSITGLVNYFVNGPTTRT*EYHQYFCKKVLRGSPSMGLSHLK 604
HGNHDDP G ++ +LDILS G VN+F + + +K GL +
Sbjct: 126 HGNHDDPTGADALCALDILSCAGFVNHFGRSMSVEKIDISPVLLQKGSTKIALYGLGSIP 185
Query: 605 DQRLSRLFAEKKVEMERPDE 664
D+RL R+F KKV M RP E
Sbjct: 186 DERLYRMFVNKKVTMLRPKE 205
Score = 75.8 bits (178), Expect = 2e-13
Identities = 33/59 (55%), Positives = 45/59 (76%)
Frame = +3
Query: 78 AWSPDDTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQ 254
A ++T +IL+A+DIHLGFME D VRG D+F+ +E+L LA + +VD ILLGGDLF +
Sbjct: 6 ALDDENTFKILVATDIHLGFMEKDAVRGNDTFVTLDEILRLAQENEVDFILLGGDLFHE 64
Score = 56.4 bits (130), Expect = 1e-07
Identities = 30/76 (39%), Positives = 42/76 (55%)
Frame = +1
Query: 532 VRISPVLLQKGLTRLALYGT*PFKRSETFTSFC*KKSGNGETR*NIGTGFHLFVLHPNHA 711
+ ISPVLLQKG T++ALYG + F KK + + + F+LFV+H N +
Sbjct: 162 IDISPVLLQKGSTKIALYGLGSIPDERLYRMFVNKKVTMLRPKEDENSWFNLFVIHQNRS 221
Query: 712 DRGHSNYIPEGVLPTF 759
G +N+IPE L F
Sbjct: 222 KHGSTNFIPEQFLDDF 237
>U42408-1|AAB58817.1| 517|Homo sapiens ladinin protein.
Length = 517
Score = 30.3 bits (65), Expect = 8.8
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = -1
Query: 235 PKSIKSTSHCTARDKTSSKAIKLSSPRTGSFSMKPR 128
P + + +T S ++K SSPRT SF MKP+
Sbjct: 346 PSKEEEADMSSPTQRTYSSSLKRSSPRTISFRMKPK 381
>BC071890-1|AAH71890.1| 517|Homo sapiens ladinin 1 protein.
Length = 517
Score = 30.3 bits (65), Expect = 8.8
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = -1
Query: 235 PKSIKSTSHCTARDKTSSKAIKLSSPRTGSFSMKPR 128
P + + +T S ++K SSPRT SF MKP+
Sbjct: 346 PSKEEEADMSSPTQRTYSSSLKRSSPRTISFRMKPK 381
>BC009742-1|AAH09742.1| 517|Homo sapiens ladinin 1 protein.
Length = 517
Score = 30.3 bits (65), Expect = 8.8
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = -1
Query: 235 PKSIKSTSHCTARDKTSSKAIKLSSPRTGSFSMKPR 128
P + + +T S ++K SSPRT SF MKP+
Sbjct: 346 PSKEEEADMSSPTQRTYSSSLKRSSPRTISFRMKPK 381
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 121,109,792
Number of Sequences: 237096
Number of extensions: 2698946
Number of successful extensions: 8623
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 8425
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8596
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10259383312
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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