Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40094
(802 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X13697-1|CAA31985.1| 408|Homo sapiens protein ( Human mRNA for ... 116 8e-26
J04205-1|AAA51885.1| 408|Homo sapiens La protein protein. 116 8e-26
BT009862-1|AAP88864.1| 408|Homo sapiens Sjogren syndrome antige... 116 8e-26
BC020818-1|AAH20818.1| 408|Homo sapiens Sjogren syndrome antige... 116 8e-26
BC001289-1|AAH01289.1| 408|Homo sapiens Sjogren syndrome antige... 116 8e-26
AC009967-1|AAY14868.1| 408|Homo sapiens unknown protein. 116 8e-26
M20328-1|AAA36577.1| 355|Homo sapiens protein ( Human ribonucle... 65 3e-10
BC066945-1|AAH66945.1| 582|Homo sapiens LARP7 protein protein. 64 4e-10
BC014018-1|AAH14018.1| 491|Homo sapiens La ribonucleoprotein do... 54 8e-07
BC009446-1|AAH09446.1| 491|Homo sapiens La ribonucleoprotein do... 54 8e-07
BC006082-1|AAH06082.1| 491|Homo sapiens La ribonucleoprotein do... 54 8e-07
AK002058-1|BAA92061.1| 491|Homo sapiens protein ( Homo sapiens ... 54 8e-07
AF443829-1|AAN76711.1| 491|Homo sapiens acheron protein. 54 8e-07
AF443828-1|AAN76710.1| 491|Homo sapiens acheron protein. 54 8e-07
DQ185046-1|ABD14426.1| 48|Homo sapiens Sjogren syndrome antige... 49 2e-05
BC001460-1|AAH01460.2| 1019|Homo sapiens La ribonucleoprotein do... 44 5e-04
AK091465-1|BAC03668.1| 816|Homo sapiens protein ( Homo sapiens ... 44 5e-04
AB018274-1|BAA34451.1| 1096|Homo sapiens KIAA0731 protein protein. 44 5e-04
X14684-1|CAA32815.1| 296|Homo sapiens La 4.1 protein protein. 40 0.010
M35261-1|AAA36652.1| 27|Homo sapiens protein ( Human SS-B/La p... 38 0.056
BC063479-1|AAH63479.1| 374|Homo sapiens LARP4 protein protein. 36 0.13
BC022377-1|AAH22377.1| 188|Homo sapiens LARP4 protein protein. 36 0.13
AY004310-1|AAF86614.1| 375|Homo sapiens c-Mpl binding protein p... 36 0.13
AK125113-1|BAC86052.1| 654|Homo sapiens protein ( Homo sapiens ... 36 0.13
D86971-1|BAA13207.2| 751|Homo sapiens KIAA0217 protein. 36 0.17
BC131630-1|AAI31631.1| 738|Homo sapiens La ribonucleoprotein do... 36 0.17
AL359878-4|CAI13663.2| 738|Homo sapiens La ribonucleoprotein do... 36 0.17
AL157709-4|CAI39596.2| 738|Homo sapiens La ribonucleoprotein do... 36 0.17
M94630-1|AAA35781.1| 328|Homo sapiens DNA-binding protein protein. 33 0.91
U02019-1|AAC50056.1| 286|Homo sapiens p37 AUF1 protein. 32 2.8
D55674-1|BAA09525.1| 355|Homo sapiens heterogeneous nuclear rib... 32 2.8
D55673-1|BAA09524.1| 215|Homo sapiens heterogeneous nuclear rib... 32 2.8
D55672-1|BAA09523.1| 306|Homo sapiens heterogeneous nuclear rib... 32 2.8
D55671-1|BAA09522.1| 267|Homo sapiens heterogeneous nuclear rib... 32 2.8
BC026015-1|AAH26015.1| 306|Homo sapiens heterogeneous nuclear r... 32 2.8
BC023977-1|AAH23977.1| 306|Homo sapiens heterogeneous nuclear r... 32 2.8
BC002401-1|AAH02401.1| 355|Homo sapiens heterogeneous nuclear r... 32 2.8
AF039575-1|AAB96683.1| 298|Homo sapiens heterogeneous nuclear r... 32 2.8
AF026126-3|AAC23476.1| 336|Homo sapiens heterogeneous nuclear r... 32 2.8
AF026126-2|AAC23475.1| 306|Homo sapiens heterogeneous nuclear r... 32 2.8
AF026126-1|AAC23474.1| 355|Homo sapiens heterogeneous nuclear r... 32 2.8
AC124016-1|AAY40913.1| 355|Homo sapiens unknown protein. 32 2.8
AY528715-1|AAT44400.1| 1016|Homo sapiens antigen MU-RMS-40.16A p... 31 6.4
AJ131693-1|CAB40713.1| 3908|Homo sapiens AKAP450 protein protein. 31 6.4
AJ010770-1|CAA09361.1| 3911|Homo sapiens Hyperion protein protein. 31 6.4
AF091711-1|AAD39719.1| 1773|Homo sapiens splice variant AKAP350 ... 31 6.4
AF083037-1|AAD22767.1| 3595|Homo sapiens A-kinase anchoring prot... 31 6.4
AC004013-1|AAB96867.2| 2058|Homo sapiens unknown protein. 31 6.4
AB019691-1|BAA78718.1| 3899|Homo sapiens Centrosome- and Golgi-l... 31 6.4
AB018346-1|BAA34523.1| 1708|Homo sapiens KIAA0803 protein protein. 31 6.4
D89678-1|BAA22860.1| 271|Homo sapiens A+U-rich element RNA bind... 30 8.5
D89092-1|BAA24361.1| 301|Homo sapiens hnRNP JKTBP protein. 30 8.5
CR407623-1|CAG28551.1| 420|Homo sapiens HNRPDL protein. 30 8.5
BC071944-1|AAH71944.1| 420|Homo sapiens heterogeneous nuclear r... 30 8.5
BC011714-1|AAH11714.1| 420|Homo sapiens heterogeneous nuclear r... 30 8.5
BC007392-1|AAH07392.2| 415|Homo sapiens HNRPDL protein protein. 30 8.5
AY453824-1|AAR17782.1| 298|Homo sapiens CArG binding factor pro... 30 8.5
AC124016-2|AAY40914.1| 420|Homo sapiens unknown protein. 30 8.5
AB066484-1|BAB62188.1| 244|Homo sapiens JKTBP1delta6 protein. 30 8.5
AB017019-1|BAA75241.1| 420|Homo sapiens JKTBP2 protein. 30 8.5
AB017018-2|BAA75240.1| 301|Homo sapiens JKTBP1 protein. 30 8.5
AB017018-1|BAA75239.1| 420|Homo sapiens JKTBP2 protein. 30 8.5
>X13697-1|CAA31985.1| 408|Homo sapiens protein ( Human mRNA for
ribonucleoprotein SS-B/La. ).
Length = 408
Score = 116 bits (280), Expect = 8e-26
Identities = 51/84 (60%), Positives = 68/84 (80%)
Frame = +3
Query: 255 FGDVNLHRDKFLQEQIKLDDGWVPLEILTKFNRLAKLTEDTDVIANALNKSTSGLLEVSE 434
FGD NL RDKFL+EQIKLD+GWVPLEI+ KFNRL +LT D +VI AL+KS + L+E+SE
Sbjct: 25 FGDFNLPRDKFLKEQIKLDEGWVPLEIMIKFNRLNRLTTDFNVIVEALSKSKAELMEISE 84
Query: 435 DNKKVRRNPEQPLPEMNEELRKEI 506
D K+RR+P +PLPE+ +E + ++
Sbjct: 85 DKTKIRRSPSKPLPEVTDEYKNDV 108
Score = 46.4 bits (105), Expect = 1e-04
Identities = 25/68 (36%), Positives = 42/68 (61%)
Frame = +2
Query: 509 NRSIYAKGFAKDASLDDLLNYFKQFQEVENVIMRRYVEKSTKKRLFQGLYLLHSRLENQA 688
NRS+Y KGF DA+LDD+ + + +V N+ MRR + K+ K +F ++ +E+ A
Sbjct: 110 NRSVYIKGFPTDATLDDIKEWLEDKGQVLNIQMRRTLHKAFKGSIF----VVFDSIES-A 164
Query: 689 EKFLDAKG 712
+KF++ G
Sbjct: 165 KKFVETPG 172
>J04205-1|AAA51885.1| 408|Homo sapiens La protein protein.
Length = 408
Score = 116 bits (280), Expect = 8e-26
Identities = 51/84 (60%), Positives = 68/84 (80%)
Frame = +3
Query: 255 FGDVNLHRDKFLQEQIKLDDGWVPLEILTKFNRLAKLTEDTDVIANALNKSTSGLLEVSE 434
FGD NL RDKFL+EQIKLD+GWVPLEI+ KFNRL +LT D +VI AL+KS + L+E+SE
Sbjct: 25 FGDFNLPRDKFLKEQIKLDEGWVPLEIMIKFNRLNRLTTDFNVIVEALSKSKAELMEISE 84
Query: 435 DNKKVRRNPEQPLPEMNEELRKEI 506
D K+RR+P +PLPE+ +E + ++
Sbjct: 85 DKTKIRRSPSKPLPEVTDEYKNDV 108
Score = 46.4 bits (105), Expect = 1e-04
Identities = 25/68 (36%), Positives = 42/68 (61%)
Frame = +2
Query: 509 NRSIYAKGFAKDASLDDLLNYFKQFQEVENVIMRRYVEKSTKKRLFQGLYLLHSRLENQA 688
NRS+Y KGF DA+LDD+ + + +V N+ MRR + K+ K +F ++ +E+ A
Sbjct: 110 NRSVYIKGFPTDATLDDIKEWLEDKGQVLNIQMRRTLHKAFKGSIF----VVFDSIES-A 164
Query: 689 EKFLDAKG 712
+KF++ G
Sbjct: 165 KKFVETPG 172
>BT009862-1|AAP88864.1| 408|Homo sapiens Sjogren syndrome antigen B
(autoantigen La) protein.
Length = 408
Score = 116 bits (280), Expect = 8e-26
Identities = 51/84 (60%), Positives = 68/84 (80%)
Frame = +3
Query: 255 FGDVNLHRDKFLQEQIKLDDGWVPLEILTKFNRLAKLTEDTDVIANALNKSTSGLLEVSE 434
FGD NL RDKFL+EQIKLD+GWVPLEI+ KFNRL +LT D +VI AL+KS + L+E+SE
Sbjct: 25 FGDFNLPRDKFLKEQIKLDEGWVPLEIMIKFNRLNRLTTDFNVIVEALSKSKAELMEISE 84
Query: 435 DNKKVRRNPEQPLPEMNEELRKEI 506
D K+RR+P +PLPE+ +E + ++
Sbjct: 85 DKTKIRRSPSKPLPEVTDEYKNDV 108
Score = 46.4 bits (105), Expect = 1e-04
Identities = 25/68 (36%), Positives = 42/68 (61%)
Frame = +2
Query: 509 NRSIYAKGFAKDASLDDLLNYFKQFQEVENVIMRRYVEKSTKKRLFQGLYLLHSRLENQA 688
NRS+Y KGF DA+LDD+ + + +V N+ MRR + K+ K +F ++ +E+ A
Sbjct: 110 NRSVYIKGFPTDATLDDIKEWLEDKGQVLNIQMRRTLHKAFKGSIF----VVFDSIES-A 164
Query: 689 EKFLDAKG 712
+KF++ G
Sbjct: 165 KKFVETPG 172
>BC020818-1|AAH20818.1| 408|Homo sapiens Sjogren syndrome antigen B
(autoantigen La) protein.
Length = 408
Score = 116 bits (280), Expect = 8e-26
Identities = 51/84 (60%), Positives = 68/84 (80%)
Frame = +3
Query: 255 FGDVNLHRDKFLQEQIKLDDGWVPLEILTKFNRLAKLTEDTDVIANALNKSTSGLLEVSE 434
FGD NL RDKFL+EQIKLD+GWVPLEI+ KFNRL +LT D +VI AL+KS + L+E+SE
Sbjct: 25 FGDFNLPRDKFLKEQIKLDEGWVPLEIMIKFNRLNRLTTDFNVIVEALSKSKAELMEISE 84
Query: 435 DNKKVRRNPEQPLPEMNEELRKEI 506
D K+RR+P +PLPE+ +E + ++
Sbjct: 85 DKTKIRRSPSKPLPEVTDEYKNDV 108
Score = 46.4 bits (105), Expect = 1e-04
Identities = 25/68 (36%), Positives = 42/68 (61%)
Frame = +2
Query: 509 NRSIYAKGFAKDASLDDLLNYFKQFQEVENVIMRRYVEKSTKKRLFQGLYLLHSRLENQA 688
NRS+Y KGF DA+LDD+ + + +V N+ MRR + K+ K +F ++ +E+ A
Sbjct: 110 NRSVYIKGFPTDATLDDIKEWLEDKGQVLNIQMRRTLHKAFKGSIF----VVFDSIES-A 164
Query: 689 EKFLDAKG 712
+KF++ G
Sbjct: 165 KKFVETPG 172
>BC001289-1|AAH01289.1| 408|Homo sapiens Sjogren syndrome antigen B
(autoantigen La) protein.
Length = 408
Score = 116 bits (280), Expect = 8e-26
Identities = 51/84 (60%), Positives = 68/84 (80%)
Frame = +3
Query: 255 FGDVNLHRDKFLQEQIKLDDGWVPLEILTKFNRLAKLTEDTDVIANALNKSTSGLLEVSE 434
FGD NL RDKFL+EQIKLD+GWVPLEI+ KFNRL +LT D +VI AL+KS + L+E+SE
Sbjct: 25 FGDFNLPRDKFLKEQIKLDEGWVPLEIMIKFNRLNRLTTDFNVIVEALSKSKAELMEISE 84
Query: 435 DNKKVRRNPEQPLPEMNEELRKEI 506
D K+RR+P +PLPE+ +E + ++
Sbjct: 85 DKTKIRRSPSKPLPEVTDEYKNDV 108
Score = 46.4 bits (105), Expect = 1e-04
Identities = 25/68 (36%), Positives = 42/68 (61%)
Frame = +2
Query: 509 NRSIYAKGFAKDASLDDLLNYFKQFQEVENVIMRRYVEKSTKKRLFQGLYLLHSRLENQA 688
NRS+Y KGF DA+LDD+ + + +V N+ MRR + K+ K +F ++ +E+ A
Sbjct: 110 NRSVYIKGFPTDATLDDIKEWLEDKGQVLNIQMRRTLHKAFKGSIF----VVFDSIES-A 164
Query: 689 EKFLDAKG 712
+KF++ G
Sbjct: 165 KKFVETPG 172
>AC009967-1|AAY14868.1| 408|Homo sapiens unknown protein.
Length = 408
Score = 116 bits (280), Expect = 8e-26
Identities = 51/84 (60%), Positives = 68/84 (80%)
Frame = +3
Query: 255 FGDVNLHRDKFLQEQIKLDDGWVPLEILTKFNRLAKLTEDTDVIANALNKSTSGLLEVSE 434
FGD NL RDKFL+EQIKLD+GWVPLEI+ KFNRL +LT D +VI AL+KS + L+E+SE
Sbjct: 25 FGDFNLPRDKFLKEQIKLDEGWVPLEIMIKFNRLNRLTTDFNVIVEALSKSKAELMEISE 84
Query: 435 DNKKVRRNPEQPLPEMNEELRKEI 506
D K+RR+P +PLPE+ +E + ++
Sbjct: 85 DKTKIRRSPSKPLPEVTDEYKNDV 108
Score = 46.4 bits (105), Expect = 1e-04
Identities = 25/68 (36%), Positives = 42/68 (61%)
Frame = +2
Query: 509 NRSIYAKGFAKDASLDDLLNYFKQFQEVENVIMRRYVEKSTKKRLFQGLYLLHSRLENQA 688
NRS+Y KGF DA+LDD+ + + +V N+ MRR + K+ K +F ++ +E+ A
Sbjct: 110 NRSVYIKGFPTDATLDDIKEWLEDKGQVLNIQMRRTLHKAFKGSIF----VVFDSIES-A 164
Query: 689 EKFLDAKG 712
+KF++ G
Sbjct: 165 KKFVETPG 172
>M20328-1|AAA36577.1| 355|Homo sapiens protein ( Human
ribonucleoprotein (La) mRNA, 3' end. ).
Length = 355
Score = 64.9 bits (151), Expect = 3e-10
Identities = 27/55 (49%), Positives = 42/55 (76%)
Frame = +3
Query: 342 KFNRLAKLTEDTDVIANALNKSTSGLLEVSEDNKKVRRNPEQPLPEMNEELRKEI 506
+FNRL +LT D +VI AL+KS + L+E+SED K+RR+P +PLPE+ +E + ++
Sbjct: 1 EFNRLNRLTTDFNVIVEALSKSKAELMEISEDKTKIRRSPSKPLPEVTDEYKNDV 55
Score = 46.4 bits (105), Expect = 1e-04
Identities = 25/68 (36%), Positives = 42/68 (61%)
Frame = +2
Query: 509 NRSIYAKGFAKDASLDDLLNYFKQFQEVENVIMRRYVEKSTKKRLFQGLYLLHSRLENQA 688
NRS+Y KGF DA+LDD+ + + +V N+ MRR + K+ K +F ++ +E+ A
Sbjct: 57 NRSVYIKGFPTDATLDDIKEWLEDKGQVLNIQMRRTLHKAFKGSIF----VVFDSIES-A 111
Query: 689 EKFLDAKG 712
+KF++ G
Sbjct: 112 KKFVETPG 119
>BC066945-1|AAH66945.1| 582|Homo sapiens LARP7 protein protein.
Length = 582
Score = 64.5 bits (150), Expect = 4e-10
Identities = 34/76 (44%), Positives = 52/76 (68%), Gaps = 1/76 (1%)
Frame = +3
Query: 255 FGDVNLHRDKFLQEQI-KLDDGWVPLEILTKFNRLAKLTEDTDVIANALNKSTSGLLEVS 431
FGD NLH+D+FL+EQI K DG+V + +L FN++ KLT D +IA AL +S ++E+
Sbjct: 46 FGDANLHKDRFLREQIEKSRDGYVDISLLVSFNKMKKLTTDGKLIARALR--SSAVVELD 103
Query: 432 EDNKKVRRNPEQPLPE 479
+ ++RR ++PL E
Sbjct: 104 LEGTRIRR--KKPLGE 117
>BC014018-1|AAH14018.1| 491|Homo sapiens La ribonucleoprotein
domain family, member 6 protein.
Length = 491
Score = 53.6 bits (123), Expect = 8e-07
Identities = 29/74 (39%), Positives = 46/74 (62%), Gaps = 1/74 (1%)
Frame = +3
Query: 255 FGDVNLHRDKFLQEQIKLDD-GWVPLEILTKFNRLAKLTEDTDVIANALNKSTSGLLEVS 431
F D NL +D FL + ++ + G+V +++LT F ++ LT D A+AL S +LE++
Sbjct: 104 FSDENLEKDAFLLKHVRRNKLGYVSVKLLTSFKKVKHLTRDWRTTAHALKYSV--VLELN 161
Query: 432 EDNKKVRRNPEQPL 473
ED++KVRR PL
Sbjct: 162 EDHRKVRRTTPVPL 175
>BC009446-1|AAH09446.1| 491|Homo sapiens La ribonucleoprotein
domain family, member 6 protein.
Length = 491
Score = 53.6 bits (123), Expect = 8e-07
Identities = 29/74 (39%), Positives = 46/74 (62%), Gaps = 1/74 (1%)
Frame = +3
Query: 255 FGDVNLHRDKFLQEQIKLDD-GWVPLEILTKFNRLAKLTEDTDVIANALNKSTSGLLEVS 431
F D NL +D FL + ++ + G+V +++LT F ++ LT D A+AL S +LE++
Sbjct: 104 FSDENLEKDAFLLKHVRRNKLGYVSVKLLTSFKKVKHLTRDWRTTAHALKYSV--VLELN 161
Query: 432 EDNKKVRRNPEQPL 473
ED++KVRR PL
Sbjct: 162 EDHRKVRRTTPVPL 175
>BC006082-1|AAH06082.1| 491|Homo sapiens La ribonucleoprotein
domain family, member 6 protein.
Length = 491
Score = 53.6 bits (123), Expect = 8e-07
Identities = 29/74 (39%), Positives = 46/74 (62%), Gaps = 1/74 (1%)
Frame = +3
Query: 255 FGDVNLHRDKFLQEQIKLDD-GWVPLEILTKFNRLAKLTEDTDVIANALNKSTSGLLEVS 431
F D NL +D FL + ++ + G+V +++LT F ++ LT D A+AL S +LE++
Sbjct: 104 FSDENLEKDAFLLKHVRRNKLGYVSVKLLTSFKKVKHLTRDWRTTAHALKYSV--VLELN 161
Query: 432 EDNKKVRRNPEQPL 473
ED++KVRR PL
Sbjct: 162 EDHRKVRRTTPVPL 175
>AK002058-1|BAA92061.1| 491|Homo sapiens protein ( Homo sapiens
cDNA FLJ11196 fis, clone PLACE1007688, weakly similar to
LA PROTEIN HOMOLOG. ).
Length = 491
Score = 53.6 bits (123), Expect = 8e-07
Identities = 29/74 (39%), Positives = 46/74 (62%), Gaps = 1/74 (1%)
Frame = +3
Query: 255 FGDVNLHRDKFLQEQIKLDD-GWVPLEILTKFNRLAKLTEDTDVIANALNKSTSGLLEVS 431
F D NL +D FL + ++ + G+V +++LT F ++ LT D A+AL S +LE++
Sbjct: 104 FSDENLEKDAFLLKHVRRNKLGYVSVKLLTSFKKVKHLTRDWRTTAHALKYSV--VLELN 161
Query: 432 EDNKKVRRNPEQPL 473
ED++KVRR PL
Sbjct: 162 EDHRKVRRTTPVPL 175
>AF443829-1|AAN76711.1| 491|Homo sapiens acheron protein.
Length = 491
Score = 53.6 bits (123), Expect = 8e-07
Identities = 29/74 (39%), Positives = 46/74 (62%), Gaps = 1/74 (1%)
Frame = +3
Query: 255 FGDVNLHRDKFLQEQIKLDD-GWVPLEILTKFNRLAKLTEDTDVIANALNKSTSGLLEVS 431
F D NL +D FL + ++ + G+V +++LT F ++ LT D A+AL S +LE++
Sbjct: 104 FSDENLEKDAFLLKHVRRNKLGYVSVKLLTSFKKVKHLTRDWRTTAHALKYSV--VLELN 161
Query: 432 EDNKKVRRNPEQPL 473
ED++KVRR PL
Sbjct: 162 EDHRKVRRTTPVPL 175
>AF443828-1|AAN76710.1| 491|Homo sapiens acheron protein.
Length = 491
Score = 53.6 bits (123), Expect = 8e-07
Identities = 29/74 (39%), Positives = 46/74 (62%), Gaps = 1/74 (1%)
Frame = +3
Query: 255 FGDVNLHRDKFLQEQIKLDD-GWVPLEILTKFNRLAKLTEDTDVIANALNKSTSGLLEVS 431
F D NL +D FL + ++ + G+V +++LT F ++ LT D A+AL S +LE++
Sbjct: 104 FSDENLEKDAFLLKHVRRNKLGYVSVKLLTSFKKVKHLTRDWRTTAHALKYSV--VLELN 161
Query: 432 EDNKKVRRNPEQPL 473
ED++KVRR PL
Sbjct: 162 EDHRKVRRTTPVPL 175
>DQ185046-1|ABD14426.1| 48|Homo sapiens Sjogren syndrome antigen B
protein.
Length = 48
Score = 48.8 bits (111), Expect = 2e-05
Identities = 20/24 (83%), Positives = 22/24 (91%)
Frame = +3
Query: 255 FGDVNLHRDKFLQEQIKLDDGWVP 326
FGD NL RDKFL+EQIKLD+GWVP
Sbjct: 25 FGDFNLPRDKFLKEQIKLDEGWVP 48
>BC001460-1|AAH01460.2| 1019|Homo sapiens La ribonucleoprotein
domain family, member 1 protein.
Length = 1019
Score = 44.4 bits (100), Expect = 5e-04
Identities = 25/71 (35%), Positives = 43/71 (60%), Gaps = 1/71 (1%)
Frame = +3
Query: 267 NLHRDKFLQEQIKLDDGWVPLEILTKFNRLAKLTEDTDVIANALNKSTSGLLEVSEDNKK 446
NL RD FL+ ++ D G++P+ ++ F+R+ LT D +I AL S ++E+ ++ +
Sbjct: 342 NLERDFFLRRKMDAD-GFLPITLIASFHRVQALTTDISLIFAALKDSK--VVEIVDEKVR 398
Query: 447 VRRNPEQ-PLP 476
R PE+ PLP
Sbjct: 399 RREEPEKWPLP 409
>AK091465-1|BAC03668.1| 816|Homo sapiens protein ( Homo sapiens
cDNA FLJ34146 fis, clone FCBBF3011889, weakly similar to
Drosophila melanogaster La related protein (larp) mRNA.
).
Length = 816
Score = 44.4 bits (100), Expect = 5e-04
Identities = 25/71 (35%), Positives = 43/71 (60%), Gaps = 1/71 (1%)
Frame = +3
Query: 267 NLHRDKFLQEQIKLDDGWVPLEILTKFNRLAKLTEDTDVIANALNKSTSGLLEVSEDNKK 446
NL RD FL+ ++ D G++P+ ++ F+R+ LT D +I AL S ++E+ ++ +
Sbjct: 419 NLERDFFLRRKMDAD-GFLPITLIASFHRVQALTTDISLIFAALKDSK--VVEIVDEKVR 475
Query: 447 VRRNPEQ-PLP 476
R PE+ PLP
Sbjct: 476 RREEPEKWPLP 486
>AB018274-1|BAA34451.1| 1096|Homo sapiens KIAA0731 protein protein.
Length = 1096
Score = 44.4 bits (100), Expect = 5e-04
Identities = 25/71 (35%), Positives = 43/71 (60%), Gaps = 1/71 (1%)
Frame = +3
Query: 267 NLHRDKFLQEQIKLDDGWVPLEILTKFNRLAKLTEDTDVIANALNKSTSGLLEVSEDNKK 446
NL RD FL+ ++ D G++P+ ++ F+R+ LT D +I AL S ++E+ ++ +
Sbjct: 419 NLERDFFLRRKMDAD-GFLPITLIASFHRVQALTTDISLIFAALKDSK--VVEIVDEKVR 475
Query: 447 VRRNPEQ-PLP 476
R PE+ PLP
Sbjct: 476 RREEPEKWPLP 486
>X14684-1|CAA32815.1| 296|Homo sapiens La 4.1 protein protein.
Length = 296
Score = 39.9 bits (89), Expect = 0.010
Identities = 22/65 (33%), Positives = 39/65 (60%)
Frame = +2
Query: 518 IYAKGFAKDASLDDLLNYFKQFQEVENVIMRRYVEKSTKKRLFQGLYLLHSRLENQAEKF 697
+Y KGF DA+LDD+ + + +V N+ MRR + K+ K +F ++ +E+ A+KF
Sbjct: 1 LYIKGFPTDATLDDIKEWLEDKGQVLNIQMRRTLHKAFKGSIF----VVFDSIES-AKKF 55
Query: 698 LDAKG 712
++ G
Sbjct: 56 VETPG 60
>M35261-1|AAA36652.1| 27|Homo sapiens protein ( Human SS-B/La
protein mRNA, partial cds. ).
Length = 27
Score = 37.5 bits (83), Expect = 0.056
Identities = 13/27 (48%), Positives = 21/27 (77%)
Frame = +3
Query: 423 EVSEDNKKVRRNPEQPLPEMNEELRKE 503
E+SED K+RR+P +PLPE+ +E + +
Sbjct: 1 EISEDKTKIRRSPSKPLPEVTDEYKND 27
>BC063479-1|AAH63479.1| 374|Homo sapiens LARP4 protein protein.
Length = 374
Score = 36.3 bits (80), Expect = 0.13
Identities = 21/66 (31%), Positives = 35/66 (53%)
Frame = +3
Query: 255 FGDVNLHRDKFLQEQIKLDDGWVPLEILTKFNRLAKLTEDTDVIANALNKSTSGLLEVSE 434
F NL +D +L Q+ D ++P+ + + KLT D D+I L +S +++V E
Sbjct: 131 FSRENLSKDLYLISQMDSDQ-FIPIWTVANMEEIKKLTTDPDLILEVLR--SSPMVQVDE 187
Query: 435 DNKKVR 452
+KVR
Sbjct: 188 KGEKVR 193
>BC022377-1|AAH22377.1| 188|Homo sapiens LARP4 protein protein.
Length = 188
Score = 36.3 bits (80), Expect = 0.13
Identities = 21/66 (31%), Positives = 35/66 (53%)
Frame = +3
Query: 255 FGDVNLHRDKFLQEQIKLDDGWVPLEILTKFNRLAKLTEDTDVIANALNKSTSGLLEVSE 434
F NL +D +L Q+ D ++P+ + + KLT D D+I L +S +++V E
Sbjct: 61 FSRENLSKDLYLISQMDSDQ-FIPIWTVANMEEIKKLTTDPDLILEVLR--SSPMVQVDE 117
Query: 435 DNKKVR 452
+KVR
Sbjct: 118 KGEKVR 123
>AY004310-1|AAF86614.1| 375|Homo sapiens c-Mpl binding protein
protein.
Length = 375
Score = 36.3 bits (80), Expect = 0.13
Identities = 21/66 (31%), Positives = 35/66 (53%)
Frame = +3
Query: 255 FGDVNLHRDKFLQEQIKLDDGWVPLEILTKFNRLAKLTEDTDVIANALNKSTSGLLEVSE 434
F NL +D +L Q+ D ++P+ + + KLT D D+I L +S +++V E
Sbjct: 61 FSRENLSKDLYLISQMDSDQ-FIPIWTVANMEEIKKLTTDPDLILEVLR--SSPMVQVDE 117
Query: 435 DNKKVR 452
+KVR
Sbjct: 118 KGEKVR 123
>AK125113-1|BAC86052.1| 654|Homo sapiens protein ( Homo sapiens
cDNA FLJ43123 fis, clone CTONG3003972. ).
Length = 654
Score = 36.3 bits (80), Expect = 0.13
Identities = 21/66 (31%), Positives = 35/66 (53%)
Frame = +3
Query: 255 FGDVNLHRDKFLQEQIKLDDGWVPLEILTKFNRLAKLTEDTDVIANALNKSTSGLLEVSE 434
F NL +D +L Q+ D ++P+ + + KLT D D+I L +S +++V E
Sbjct: 61 FSRENLSKDLYLISQMDSDQ-FIPIWTVANMEEIKKLTTDPDLILEVLR--SSPMVQVDE 117
Query: 435 DNKKVR 452
+KVR
Sbjct: 118 KGEKVR 123
>D86971-1|BAA13207.2| 751|Homo sapiens KIAA0217 protein.
Length = 751
Score = 35.9 bits (79), Expect = 0.17
Identities = 22/74 (29%), Positives = 38/74 (51%)
Frame = +3
Query: 267 NLHRDKFLQEQIKLDDGWVPLEILTKFNRLAKLTEDTDVIANALNKSTSGLLEVSEDNKK 446
NL D +L Q+ D +VP+ + + + KL+ D D+I L + L++V E +K
Sbjct: 185 NLASDMYLISQMDSDQ-YVPITTVANLDHIKKLSTDVDLIVEVLR--SLPLVQVDEKGEK 241
Query: 447 VRRNPEQPLPEMNE 488
VR N + + + E
Sbjct: 242 VRPNQNRCIVILRE 255
>BC131630-1|AAI31631.1| 738|Homo sapiens La ribonucleoprotein
domain family, member 5 protein.
Length = 738
Score = 35.9 bits (79), Expect = 0.17
Identities = 22/74 (29%), Positives = 38/74 (51%)
Frame = +3
Query: 267 NLHRDKFLQEQIKLDDGWVPLEILTKFNRLAKLTEDTDVIANALNKSTSGLLEVSEDNKK 446
NL D +L Q+ D +VP+ + + + KL+ D D+I L + L++V E +K
Sbjct: 172 NLASDMYLISQMDSDQ-YVPITTVANLDHIKKLSTDVDLIVEVLR--SLPLVQVDEKGEK 228
Query: 447 VRRNPEQPLPEMNE 488
VR N + + + E
Sbjct: 229 VRPNQNRCIVILRE 242
>AL359878-4|CAI13663.2| 738|Homo sapiens La ribonucleoprotein
domain family, member 5 protein.
Length = 738
Score = 35.9 bits (79), Expect = 0.17
Identities = 22/74 (29%), Positives = 38/74 (51%)
Frame = +3
Query: 267 NLHRDKFLQEQIKLDDGWVPLEILTKFNRLAKLTEDTDVIANALNKSTSGLLEVSEDNKK 446
NL D +L Q+ D +VP+ + + + KL+ D D+I L + L++V E +K
Sbjct: 172 NLASDMYLISQMDSDQ-YVPITTVANLDHIKKLSTDVDLIVEVLR--SLPLVQVDEKGEK 228
Query: 447 VRRNPEQPLPEMNE 488
VR N + + + E
Sbjct: 229 VRPNQNRCIVILRE 242
>AL157709-4|CAI39596.2| 738|Homo sapiens La ribonucleoprotein
domain family, member 5 protein.
Length = 738
Score = 35.9 bits (79), Expect = 0.17
Identities = 22/74 (29%), Positives = 38/74 (51%)
Frame = +3
Query: 267 NLHRDKFLQEQIKLDDGWVPLEILTKFNRLAKLTEDTDVIANALNKSTSGLLEVSEDNKK 446
NL D +L Q+ D +VP+ + + + KL+ D D+I L + L++V E +K
Sbjct: 172 NLASDMYLISQMDSDQ-YVPITTVANLDHIKKLSTDVDLIVEVLR--SLPLVQVDEKGEK 228
Query: 447 VRRNPEQPLPEMNE 488
VR N + + + E
Sbjct: 229 VRPNQNRCIVILRE 242
>M94630-1|AAA35781.1| 328|Homo sapiens DNA-binding protein protein.
Length = 328
Score = 33.5 bits (73), Expect = 0.91
Identities = 19/75 (25%), Positives = 38/75 (50%)
Frame = +2
Query: 512 RSIYAKGFAKDASLDDLLNYFKQFQEVENVIMRRYVEKSTKKRLFQGLYLLHSRLENQAE 691
+ I+ G + D + + YF F EVE++ + ++ T KR +GL + + E +
Sbjct: 161 KKIFVGGLSPDTPEEKIREYFGGFGEVESIELP--MDNKTNKR--RGLCFITFKEEEPVK 216
Query: 692 KFLDAKGPSLGIMNC 736
K ++ K ++G+ C
Sbjct: 217 KIMEKKYHNVGLSKC 231
>U02019-1|AAC50056.1| 286|Homo sapiens p37 AUF1 protein.
Length = 286
Score = 31.9 bits (69), Expect = 2.8
Identities = 18/75 (24%), Positives = 37/75 (49%)
Frame = +2
Query: 512 RSIYAKGFAKDASLDDLLNYFKQFQEVENVIMRRYVEKSTKKRLFQGLYLLHSRLENQAE 691
+ I+ G + D + + YF F EVE++ + ++ T KR +G + + E +
Sbjct: 161 KKIFVGGLSPDTPEEKIREYFGGFGEVESIELP--MDNKTNKR--RGFCFITFKEEEPVK 216
Query: 692 KFLDAKGPSLGIMNC 736
K ++ K ++G+ C
Sbjct: 217 KIMEKKYHNVGLSKC 231
>D55674-1|BAA09525.1| 355|Homo sapiens heterogeneous nuclear
ribonucleoprotein D (hnRNP D) protein.
Length = 355
Score = 31.9 bits (69), Expect = 2.8
Identities = 18/75 (24%), Positives = 37/75 (49%)
Frame = +2
Query: 512 RSIYAKGFAKDASLDDLLNYFKQFQEVENVIMRRYVEKSTKKRLFQGLYLLHSRLENQAE 691
+ I+ G + D + + YF F EVE++ + ++ T KR +G + + E +
Sbjct: 182 KKIFVGGLSPDTPEEKIREYFGGFGEVESIELP--MDNKTNKR--RGFCFITFKEEEPVK 237
Query: 692 KFLDAKGPSLGIMNC 736
K ++ K ++G+ C
Sbjct: 238 KIMEKKYHNVGLSKC 252
>D55673-1|BAA09524.1| 215|Homo sapiens heterogeneous nuclear
ribonucleoprotein D (hnRNP D) protein.
Length = 215
Score = 31.9 bits (69), Expect = 2.8
Identities = 18/75 (24%), Positives = 37/75 (49%)
Frame = +2
Query: 512 RSIYAKGFAKDASLDDLLNYFKQFQEVENVIMRRYVEKSTKKRLFQGLYLLHSRLENQAE 691
+ I+ G + D + + YF F EVE++ + ++ T KR +G + + E +
Sbjct: 91 KKIFVGGLSPDTPEEKIREYFGGFGEVESIELP--MDNKTNKR--RGFCFITFKEEEPVK 146
Query: 692 KFLDAKGPSLGIMNC 736
K ++ K ++G+ C
Sbjct: 147 KIMEKKYHNVGLSKC 161
>D55672-1|BAA09523.1| 306|Homo sapiens heterogeneous nuclear
ribonucleoprotein D (hnRNP D) protein.
Length = 306
Score = 31.9 bits (69), Expect = 2.8
Identities = 18/75 (24%), Positives = 37/75 (49%)
Frame = +2
Query: 512 RSIYAKGFAKDASLDDLLNYFKQFQEVENVIMRRYVEKSTKKRLFQGLYLLHSRLENQAE 691
+ I+ G + D + + YF F EVE++ + ++ T KR +G + + E +
Sbjct: 182 KKIFVGGLSPDTPEEKIREYFGGFGEVESIELP--MDNKTNKR--RGFCFITFKEEEPVK 237
Query: 692 KFLDAKGPSLGIMNC 736
K ++ K ++G+ C
Sbjct: 238 KIMEKKYHNVGLSKC 252
>D55671-1|BAA09522.1| 267|Homo sapiens heterogeneous nuclear
ribonucleoprotein D (hnRNP D) protein.
Length = 267
Score = 31.9 bits (69), Expect = 2.8
Identities = 18/75 (24%), Positives = 37/75 (49%)
Frame = +2
Query: 512 RSIYAKGFAKDASLDDLLNYFKQFQEVENVIMRRYVEKSTKKRLFQGLYLLHSRLENQAE 691
+ I+ G + D + + YF F EVE++ + ++ T KR +G + + E +
Sbjct: 94 KKIFVGGLSPDTPEEKIREYFGGFGEVESIELP--MDNKTNKR--RGFCFITFKEEEPVK 149
Query: 692 KFLDAKGPSLGIMNC 736
K ++ K ++G+ C
Sbjct: 150 KIMEKKYHNVGLSKC 164
>BC026015-1|AAH26015.1| 306|Homo sapiens heterogeneous nuclear
ribonucleoprotein D (AU-rich element RNA binding protein
protein.
Length = 306
Score = 31.9 bits (69), Expect = 2.8
Identities = 18/75 (24%), Positives = 37/75 (49%)
Frame = +2
Query: 512 RSIYAKGFAKDASLDDLLNYFKQFQEVENVIMRRYVEKSTKKRLFQGLYLLHSRLENQAE 691
+ I+ G + D + + YF F EVE++ + ++ T KR +G + + E +
Sbjct: 182 KKIFVGGLSPDTPEEKIREYFGGFGEVESIELP--MDNKTNKR--RGFCFITFKEEEPVK 237
Query: 692 KFLDAKGPSLGIMNC 736
K ++ K ++G+ C
Sbjct: 238 KIMEKKYHNVGLSKC 252
>BC023977-1|AAH23977.1| 306|Homo sapiens heterogeneous nuclear
ribonucleoprotein D (AU-rich element RNA binding protein
protein.
Length = 306
Score = 31.9 bits (69), Expect = 2.8
Identities = 18/75 (24%), Positives = 37/75 (49%)
Frame = +2
Query: 512 RSIYAKGFAKDASLDDLLNYFKQFQEVENVIMRRYVEKSTKKRLFQGLYLLHSRLENQAE 691
+ I+ G + D + + YF F EVE++ + ++ T KR +G + + E +
Sbjct: 182 KKIFVGGLSPDTPEEKIREYFGGFGEVESIELP--MDNKTNKR--RGFCFITFKEEEPVK 237
Query: 692 KFLDAKGPSLGIMNC 736
K ++ K ++G+ C
Sbjct: 238 KIMEKKYHNVGLSKC 252
>BC002401-1|AAH02401.1| 355|Homo sapiens heterogeneous nuclear
ribonucleoprotein D (AU-rich element RNA binding protein
protein.
Length = 355
Score = 31.9 bits (69), Expect = 2.8
Identities = 18/75 (24%), Positives = 37/75 (49%)
Frame = +2
Query: 512 RSIYAKGFAKDASLDDLLNYFKQFQEVENVIMRRYVEKSTKKRLFQGLYLLHSRLENQAE 691
+ I+ G + D + + YF F EVE++ + ++ T KR +G + + E +
Sbjct: 182 KKIFVGGLSPDTPEEKIREYFGGFGEVESIELP--MDNKTNKR--RGFCFITFKEEEPVK 237
Query: 692 KFLDAKGPSLGIMNC 736
K ++ K ++G+ C
Sbjct: 238 KIMEKKYHNVGLSKC 252
>AF039575-1|AAB96683.1| 298|Homo sapiens heterogeneous nuclear
ribonucleoprotein D0B protein.
Length = 298
Score = 31.9 bits (69), Expect = 2.8
Identities = 18/75 (24%), Positives = 37/75 (49%)
Frame = +2
Query: 512 RSIYAKGFAKDASLDDLLNYFKQFQEVENVIMRRYVEKSTKKRLFQGLYLLHSRLENQAE 691
+ I+ G + D + + YF F EVE++ + ++ T KR +G + + E +
Sbjct: 174 KKIFVGGLSPDTPEEKIREYFGGFGEVESIELP--MDNKTNKR--RGFCFITFKEEEPVK 229
Query: 692 KFLDAKGPSLGIMNC 736
K ++ K ++G+ C
Sbjct: 230 KIMEKKYHNVGLSKC 244
>AF026126-3|AAC23476.1| 336|Homo sapiens heterogeneous nuclear
ribonucleoprotein D protein.
Length = 336
Score = 31.9 bits (69), Expect = 2.8
Identities = 18/75 (24%), Positives = 37/75 (49%)
Frame = +2
Query: 512 RSIYAKGFAKDASLDDLLNYFKQFQEVENVIMRRYVEKSTKKRLFQGLYLLHSRLENQAE 691
+ I+ G + D + + YF F EVE++ + ++ T KR +G + + E +
Sbjct: 163 KKIFVGGLSPDTPEEKIREYFGGFGEVESIELP--MDNKTNKR--RGFCFITFKEEEPVK 218
Query: 692 KFLDAKGPSLGIMNC 736
K ++ K ++G+ C
Sbjct: 219 KIMEKKYHNVGLSKC 233
>AF026126-2|AAC23475.1| 306|Homo sapiens heterogeneous nuclear
ribonucleoprotein D protein.
Length = 306
Score = 31.9 bits (69), Expect = 2.8
Identities = 18/75 (24%), Positives = 37/75 (49%)
Frame = +2
Query: 512 RSIYAKGFAKDASLDDLLNYFKQFQEVENVIMRRYVEKSTKKRLFQGLYLLHSRLENQAE 691
+ I+ G + D + + YF F EVE++ + ++ T KR +G + + E +
Sbjct: 182 KKIFVGGLSPDTPEEKIREYFGGFGEVESIELP--MDNKTNKR--RGFCFITFKEEEPVK 237
Query: 692 KFLDAKGPSLGIMNC 736
K ++ K ++G+ C
Sbjct: 238 KIMEKKYHNVGLSKC 252
>AF026126-1|AAC23474.1| 355|Homo sapiens heterogeneous nuclear
ribonucleoprotein D protein.
Length = 355
Score = 31.9 bits (69), Expect = 2.8
Identities = 18/75 (24%), Positives = 37/75 (49%)
Frame = +2
Query: 512 RSIYAKGFAKDASLDDLLNYFKQFQEVENVIMRRYVEKSTKKRLFQGLYLLHSRLENQAE 691
+ I+ G + D + + YF F EVE++ + ++ T KR +G + + E +
Sbjct: 182 KKIFVGGLSPDTPEEKIREYFGGFGEVESIELP--MDNKTNKR--RGFCFITFKEEEPVK 237
Query: 692 KFLDAKGPSLGIMNC 736
K ++ K ++G+ C
Sbjct: 238 KIMEKKYHNVGLSKC 252
>AC124016-1|AAY40913.1| 355|Homo sapiens unknown protein.
Length = 355
Score = 31.9 bits (69), Expect = 2.8
Identities = 18/75 (24%), Positives = 37/75 (49%)
Frame = +2
Query: 512 RSIYAKGFAKDASLDDLLNYFKQFQEVENVIMRRYVEKSTKKRLFQGLYLLHSRLENQAE 691
+ I+ G + D + + YF F EVE++ + ++ T KR +G + + E +
Sbjct: 182 KKIFVGGLSPDTPEEKIREYFGGFGEVESIELP--MDNKTNKR--RGFCFITFKEEEPVK 237
Query: 692 KFLDAKGPSLGIMNC 736
K ++ K ++G+ C
Sbjct: 238 KIMEKKYHNVGLSKC 252
>AY528715-1|AAT44400.1| 1016|Homo sapiens antigen MU-RMS-40.16A
protein.
Length = 1016
Score = 30.7 bits (66), Expect = 6.4
Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
Frame = +3
Query: 330 EILTKFNRLAKLTEDTDVIA--NALNKSTSGLLE-VSEDNKKVRRNPEQPLPEMNEELRK 500
E +TK + K+T D VI N L + +E + D + V+RN E+ + ++NE + K
Sbjct: 656 EQVTKLQQQLKITTDNKVIEEKNELIRDLETQIECLMSDQECVKRNREEEIEQLNEVIEK 715
>AJ131693-1|CAB40713.1| 3908|Homo sapiens AKAP450 protein protein.
Length = 3908
Score = 30.7 bits (66), Expect = 6.4
Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
Frame = +3
Query: 330 EILTKFNRLAKLTEDTDVIA--NALNKSTSGLLE-VSEDNKKVRRNPEQPLPEMNEELRK 500
E +TK + K+T D VI N L + +E + D + V+RN E+ + ++NE + K
Sbjct: 2300 EQVTKLQQQLKITTDNKVIEEKNELIRDLETQIECLMSDQECVKRNREEEIEQLNEVIEK 2359
>AJ010770-1|CAA09361.1| 3911|Homo sapiens Hyperion protein protein.
Length = 3911
Score = 30.7 bits (66), Expect = 6.4
Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
Frame = +3
Query: 330 EILTKFNRLAKLTEDTDVIA--NALNKSTSGLLE-VSEDNKKVRRNPEQPLPEMNEELRK 500
E +TK + K+T D VI N L + +E + D + V+RN E+ + ++NE + K
Sbjct: 2311 EQVTKLQQQLKITTDNKVIEEKNELIRDLETQIECLMSDQECVKRNREEEIEQLNEVIEK 2370
>AF091711-1|AAD39719.1| 1773|Homo sapiens splice variant AKAP350
protein.
Length = 1773
Score = 30.7 bits (66), Expect = 6.4
Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
Frame = +3
Query: 330 EILTKFNRLAKLTEDTDVIA--NALNKSTSGLLE-VSEDNKKVRRNPEQPLPEMNEELRK 500
E +TK + K+T D VI N L + +E + D + V+RN E+ + ++NE + K
Sbjct: 147 EQVTKLQQQLKITTDNKVIEEKNELIRDLETQIECLMSDQECVKRNREEEIEQLNEVIEK 206
>AF083037-1|AAD22767.1| 3595|Homo sapiens A-kinase anchoring protein
AKAP350 protein.
Length = 3595
Score = 30.7 bits (66), Expect = 6.4
Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
Frame = +3
Query: 330 EILTKFNRLAKLTEDTDVIA--NALNKSTSGLLE-VSEDNKKVRRNPEQPLPEMNEELRK 500
E +TK + K+T D VI N L + +E + D + V+RN E+ + ++NE + K
Sbjct: 1987 EQVTKLQQQLKITTDNKVIEEKNELIRDLETQIECLMSDQECVKRNREEEIEQLNEVIEK 2046
>AC004013-1|AAB96867.2| 2058|Homo sapiens unknown protein.
Length = 2058
Score = 30.7 bits (66), Expect = 6.4
Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
Frame = +3
Query: 330 EILTKFNRLAKLTEDTDVIA--NALNKSTSGLLE-VSEDNKKVRRNPEQPLPEMNEELRK 500
E +TK + K+T D VI N L + +E + D + V+RN E+ + ++NE + K
Sbjct: 509 EQVTKLQQQLKITTDNKVIEEKNELIRDLETQIECLMSDQECVKRNREEEIEQLNEVIEK 568
>AB019691-1|BAA78718.1| 3899|Homo sapiens Centrosome- and
Golgi-localized PKN-associated protein (CG-NAP) protein.
Length = 3899
Score = 30.7 bits (66), Expect = 6.4
Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
Frame = +3
Query: 330 EILTKFNRLAKLTEDTDVIA--NALNKSTSGLLE-VSEDNKKVRRNPEQPLPEMNEELRK 500
E +TK + K+T D VI N L + +E + D + V+RN E+ + ++NE + K
Sbjct: 2291 EQVTKLQQQLKITTDNKVIEEKNELIRDLETQIECLMSDQECVKRNREEEIEQLNEVIEK 2350
>AB018346-1|BAA34523.1| 1708|Homo sapiens KIAA0803 protein protein.
Length = 1708
Score = 30.7 bits (66), Expect = 6.4
Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
Frame = +3
Query: 330 EILTKFNRLAKLTEDTDVIA--NALNKSTSGLLE-VSEDNKKVRRNPEQPLPEMNEELRK 500
E +TK + K+T D VI N L + +E + D + V+RN E+ + ++NE + K
Sbjct: 100 EQVTKLQQQLKITTDNKVIEEKNELIRDLETQIECLMSDQECVKRNREEEIEQLNEVIEK 159
>D89678-1|BAA22860.1| 271|Homo sapiens A+U-rich element RNA binding
factor protein.
Length = 271
Score = 30.3 bits (65), Expect = 8.5
Identities = 17/75 (22%), Positives = 36/75 (48%)
Frame = +2
Query: 512 RSIYAKGFAKDASLDDLLNYFKQFQEVENVIMRRYVEKSTKKRLFQGLYLLHSRLENQAE 691
+ ++ G + D S + + YF F E+EN+ + ++ T +R +G + E +
Sbjct: 84 KKVFVGGLSPDTSEEQIKEYFGAFGEIENIELP--MDTKTNER--RGFCFITYTDEEPVK 139
Query: 692 KFLDAKGPSLGIMNC 736
K L+++ +G C
Sbjct: 140 KLLESRYHQIGSGKC 154
>D89092-1|BAA24361.1| 301|Homo sapiens hnRNP JKTBP protein.
Length = 301
Score = 30.3 bits (65), Expect = 8.5
Identities = 17/75 (22%), Positives = 36/75 (48%)
Frame = +2
Query: 512 RSIYAKGFAKDASLDDLLNYFKQFQEVENVIMRRYVEKSTKKRLFQGLYLLHSRLENQAE 691
+ ++ G + D S + + YF F E+EN+ + ++ T +R +G + E +
Sbjct: 114 KKVFVGGLSPDTSEEQIKEYFGAFGEIENIELP--MDTKTNER--RGFCFITYTDEEPVK 169
Query: 692 KFLDAKGPSLGIMNC 736
K L+++ +G C
Sbjct: 170 KLLESRYHQIGSGKC 184
>CR407623-1|CAG28551.1| 420|Homo sapiens HNRPDL protein.
Length = 420
Score = 30.3 bits (65), Expect = 8.5
Identities = 17/75 (22%), Positives = 36/75 (48%)
Frame = +2
Query: 512 RSIYAKGFAKDASLDDLLNYFKQFQEVENVIMRRYVEKSTKKRLFQGLYLLHSRLENQAE 691
+ ++ G + D S + + YF F E+EN+ + ++ T +R +G + E +
Sbjct: 233 KKVFVGGLSPDTSEEQIKEYFGAFGEIENIELP--MDTKTNER--RGFCFITYTDEEPVK 288
Query: 692 KFLDAKGPSLGIMNC 736
K L+++ +G C
Sbjct: 289 KLLESRYHQIGSGKC 303
>BC071944-1|AAH71944.1| 420|Homo sapiens heterogeneous nuclear
ribonucleoprotein D-like protein.
Length = 420
Score = 30.3 bits (65), Expect = 8.5
Identities = 17/75 (22%), Positives = 36/75 (48%)
Frame = +2
Query: 512 RSIYAKGFAKDASLDDLLNYFKQFQEVENVIMRRYVEKSTKKRLFQGLYLLHSRLENQAE 691
+ ++ G + D S + + YF F E+EN+ + ++ T +R +G + E +
Sbjct: 233 KKVFVGGLSPDTSEEQIKEYFGAFGEIENIELP--MDTKTNER--RGFCFITYTDEEPVK 288
Query: 692 KFLDAKGPSLGIMNC 736
K L+++ +G C
Sbjct: 289 KLLESRYHQIGSGKC 303
>BC011714-1|AAH11714.1| 420|Homo sapiens heterogeneous nuclear
ribonucleoprotein D-like protein.
Length = 420
Score = 30.3 bits (65), Expect = 8.5
Identities = 17/75 (22%), Positives = 36/75 (48%)
Frame = +2
Query: 512 RSIYAKGFAKDASLDDLLNYFKQFQEVENVIMRRYVEKSTKKRLFQGLYLLHSRLENQAE 691
+ ++ G + D S + + YF F E+EN+ + ++ T +R +G + E +
Sbjct: 233 KKVFVGGLSPDTSEEQIKEYFGAFGEIENIELP--MDTKTNER--RGFCFITYTDEEPVK 288
Query: 692 KFLDAKGPSLGIMNC 736
K L+++ +G C
Sbjct: 289 KLLESRYHQIGSGKC 303
>BC007392-1|AAH07392.2| 415|Homo sapiens HNRPDL protein protein.
Length = 415
Score = 30.3 bits (65), Expect = 8.5
Identities = 17/75 (22%), Positives = 36/75 (48%)
Frame = +2
Query: 512 RSIYAKGFAKDASLDDLLNYFKQFQEVENVIMRRYVEKSTKKRLFQGLYLLHSRLENQAE 691
+ ++ G + D S + + YF F E+EN+ + ++ T +R +G + E +
Sbjct: 228 KKVFVGGLSPDTSEEQIKEYFGAFGEIENIELP--MDTKTNER--RGFCFITYTDEEPVK 283
Query: 692 KFLDAKGPSLGIMNC 736
K L+++ +G C
Sbjct: 284 KLLESRYHQIGSGKC 298
>AY453824-1|AAR17782.1| 298|Homo sapiens CArG binding factor
protein.
Length = 298
Score = 30.3 bits (65), Expect = 8.5
Identities = 17/75 (22%), Positives = 36/75 (48%)
Frame = +2
Query: 512 RSIYAKGFAKDASLDDLLNYFKQFQEVENVIMRRYVEKSTKKRLFQGLYLLHSRLENQAE 691
+ ++ G + D S + + YF F E+EN+ + ++ T +R +G + E +
Sbjct: 111 KKVFVGGLSPDTSEEQIKEYFGAFGEIENIELP--MDTKTNER--RGFCFITYTDEEPVK 166
Query: 692 KFLDAKGPSLGIMNC 736
K L+++ +G C
Sbjct: 167 KLLESRYHQIGSGKC 181
>AC124016-2|AAY40914.1| 420|Homo sapiens unknown protein.
Length = 420
Score = 30.3 bits (65), Expect = 8.5
Identities = 17/75 (22%), Positives = 36/75 (48%)
Frame = +2
Query: 512 RSIYAKGFAKDASLDDLLNYFKQFQEVENVIMRRYVEKSTKKRLFQGLYLLHSRLENQAE 691
+ ++ G + D S + + YF F E+EN+ + ++ T +R +G + E +
Sbjct: 233 KKVFVGGLSPDTSEEQIKEYFGAFGEIENIELP--MDTKTNER--RGFCFITYTDEEPVK 288
Query: 692 KFLDAKGPSLGIMNC 736
K L+++ +G C
Sbjct: 289 KLLESRYHQIGSGKC 303
>AB066484-1|BAB62188.1| 244|Homo sapiens JKTBP1delta6 protein.
Length = 244
Score = 30.3 bits (65), Expect = 8.5
Identities = 17/75 (22%), Positives = 36/75 (48%)
Frame = +2
Query: 512 RSIYAKGFAKDASLDDLLNYFKQFQEVENVIMRRYVEKSTKKRLFQGLYLLHSRLENQAE 691
+ ++ G + D S + + YF F E+EN+ + ++ T +R +G + E +
Sbjct: 114 KKVFVGGLSPDTSEEQIKEYFGAFGEIENIELP--MDTKTNER--RGFCFITYTDEEPVK 169
Query: 692 KFLDAKGPSLGIMNC 736
K L+++ +G C
Sbjct: 170 KLLESRYHQIGSGKC 184
>AB017019-1|BAA75241.1| 420|Homo sapiens JKTBP2 protein.
Length = 420
Score = 30.3 bits (65), Expect = 8.5
Identities = 17/75 (22%), Positives = 36/75 (48%)
Frame = +2
Query: 512 RSIYAKGFAKDASLDDLLNYFKQFQEVENVIMRRYVEKSTKKRLFQGLYLLHSRLENQAE 691
+ ++ G + D S + + YF F E+EN+ + ++ T +R +G + E +
Sbjct: 233 KKVFVGGLSPDTSEEQIKEYFGAFGEIENIELP--MDTKTNER--RGFCFITYTDEEPVK 288
Query: 692 KFLDAKGPSLGIMNC 736
K L+++ +G C
Sbjct: 289 KLLESRYHQIGSGKC 303
>AB017018-2|BAA75240.1| 301|Homo sapiens JKTBP1 protein.
Length = 301
Score = 30.3 bits (65), Expect = 8.5
Identities = 17/75 (22%), Positives = 36/75 (48%)
Frame = +2
Query: 512 RSIYAKGFAKDASLDDLLNYFKQFQEVENVIMRRYVEKSTKKRLFQGLYLLHSRLENQAE 691
+ ++ G + D S + + YF F E+EN+ + ++ T +R +G + E +
Sbjct: 114 KKVFVGGLSPDTSEEQIKEYFGAFGEIENIELP--MDTKTNER--RGFCFITYTDEEPVK 169
Query: 692 KFLDAKGPSLGIMNC 736
K L+++ +G C
Sbjct: 170 KLLESRYHQIGSGKC 184
>AB017018-1|BAA75239.1| 420|Homo sapiens JKTBP2 protein.
Length = 420
Score = 30.3 bits (65), Expect = 8.5
Identities = 17/75 (22%), Positives = 36/75 (48%)
Frame = +2
Query: 512 RSIYAKGFAKDASLDDLLNYFKQFQEVENVIMRRYVEKSTKKRLFQGLYLLHSRLENQAE 691
+ ++ G + D S + + YF F E+EN+ + ++ T +R +G + E +
Sbjct: 233 KKVFVGGLSPDTSEEQIKEYFGAFGEIENIELP--MDTKTNER--RGFCFITYTDEEPVK 288
Query: 692 KFLDAKGPSLGIMNC 736
K L+++ +G C
Sbjct: 289 KLLESRYHQIGSGKC 303
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,170,465
Number of Sequences: 237096
Number of extensions: 2181625
Number of successful extensions: 6591
Number of sequences better than 10.0: 62
Number of HSP's better than 10.0 without gapping: 6063
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6540
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9869080686
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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