Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40094
(802 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U07652-1|AAA20518.1| 390|Drosophila melanogaster La/SS-B protein. 111 1e-24
L32988-1|AAA21776.1| 390|Drosophila melanogaster La ribonucleop... 111 1e-24
AY075257-1|AAL68124.1| 390|Drosophila melanogaster AT22034p pro... 111 1e-24
AE014134-3230|AAN11073.1| 390|Drosophila melanogaster CG10922-P... 111 1e-24
AE014134-3229|AAF53885.1| 390|Drosophila melanogaster CG10922-P... 111 1e-24
AY061107-1|AAL28655.1| 595|Drosophila melanogaster LD09531p pro... 62 1e-09
AF219009-1|AAF27644.1| 595|Drosophila melanogaster multi-sex-co... 62 1e-09
AE014298-1312|AAF46473.1| 595|Drosophila melanogaster CG12058-P... 62 1e-09
AE014297-4227|AAN14139.1| 965|Drosophila melanogaster CG14066-P... 40 0.005
AE014297-4226|AAF56783.3| 965|Drosophila melanogaster CG14066-P... 40 0.005
AE014297-4225|AAN14138.4| 1403|Drosophila melanogaster CG14066-P... 40 0.005
BT010118-1|AAQ22587.1| 961|Drosophila melanogaster AT27581p pro... 38 0.012
AY113653-1|AAM29658.1| 269|Drosophila melanogaster SD18087p pro... 38 0.012
AF221108-1|AAF35862.1| 1403|Drosophila melanogaster La related p... 38 0.012
AE014296-611|AAS64955.1| 958|Drosophila melanogaster CG11505-PC... 38 0.012
AE014296-610|AAF47745.1| 1521|Drosophila melanogaster CG11505-PA... 38 0.012
AE014296-609|AAG22237.2| 1531|Drosophila melanogaster CG11505-PB... 38 0.012
AY095055-1|AAM11383.1| 1349|Drosophila melanogaster LD43045p pro... 31 1.4
AE014297-3192|AAF56027.3| 1346|Drosophila melanogaster CG31158-P... 30 4.2
AE014297-3191|AAO41590.1| 1480|Drosophila melanogaster CG31158-P... 30 4.2
AY118662-1|AAM50031.1| 642|Drosophila melanogaster SD10038p pro... 29 7.4
AF289995-1|AAG02460.1| 642|Drosophila melanogaster thyroid horm... 29 7.4
AF244916-1|AAF63336.1| 642|Drosophila melanogaster mediator tra... 29 7.4
AE014297-2456|AAF55506.1| 642|Drosophila melanogaster CG7957-PA... 29 7.4
AY051469-1|AAK92893.1| 446|Drosophila melanogaster GH13594p pro... 29 9.8
AE014297-1363|AAF54686.3| 446|Drosophila melanogaster CG14718-P... 29 9.8
>U07652-1|AAA20518.1| 390|Drosophila melanogaster La/SS-B protein.
Length = 390
Score = 111 bits (266), Expect = 1e-24
Identities = 53/85 (62%), Positives = 64/85 (75%), Gaps = 1/85 (1%)
Frame = +3
Query: 255 FGDVNLHRDKFLQEQI-KLDDGWVPLEILTKFNRLAKLTEDTDVIANALNKSTSGLLEVS 431
FGD NL+RDKFL+EQI K +DGWVPL +L F RLA L+ D I ALNKS GL+E+S
Sbjct: 62 FGDANLNRDKFLREQIGKNEDGWVPLSVLVTFKRLASLSTDLSEIVAALNKSEEGLVEIS 121
Query: 432 EDNKKVRRNPEQPLPEMNEELRKEI 506
ED +RR+PE+P+PE NEE RKEI
Sbjct: 122 EDKLSLRRHPERPIPEHNEERRKEI 146
Score = 49.6 bits (113), Expect = 5e-06
Identities = 23/64 (35%), Positives = 38/64 (59%)
Frame = +2
Query: 512 RSIYAKGFAKDASLDDLLNYFKQFQEVENVIMRRYVEKSTKKRLFQGLYLLHSRLENQAE 691
R+ YAKGF D+ + +LL++ + +V N+ MR +K TK F+G L ++QA+
Sbjct: 149 RTAYAKGFPLDSQISELLDFTANYDKVVNLTMRNSYDKPTKSYKFKGSIFLTFETKDQAK 208
Query: 692 KFLD 703
FL+
Sbjct: 209 AFLE 212
Score = 32.3 bits (70), Expect = 0.79
Identities = 12/39 (30%), Positives = 23/39 (58%)
Frame = +1
Query: 649 GSVFATFQTREPGRKVFGCQRAQFGDNELLTLWAGDFLR 765
GS+F TF+T++ + ++ + + ELL W D+L+
Sbjct: 195 GSIFLTFETKDQAKAFLEQEKIVYKERELLRKWQVDYLK 233
>L32988-1|AAA21776.1| 390|Drosophila melanogaster La
ribonucleoprotein protein.
Length = 390
Score = 111 bits (266), Expect = 1e-24
Identities = 53/85 (62%), Positives = 64/85 (75%), Gaps = 1/85 (1%)
Frame = +3
Query: 255 FGDVNLHRDKFLQEQI-KLDDGWVPLEILTKFNRLAKLTEDTDVIANALNKSTSGLLEVS 431
FGD NL+RDKFL+EQI K +DGWVPL +L F RLA L+ D I ALNKS GL+E+S
Sbjct: 62 FGDANLNRDKFLREQIGKNEDGWVPLSVLVTFKRLASLSTDLSEIVAALNKSEEGLVEIS 121
Query: 432 EDNKKVRRNPEQPLPEMNEELRKEI 506
ED +RR+PE+P+PE NEE RKEI
Sbjct: 122 EDKLSLRRHPERPIPEHNEERRKEI 146
Score = 52.0 bits (119), Expect = 9e-07
Identities = 23/64 (35%), Positives = 40/64 (62%)
Frame = +2
Query: 512 RSIYAKGFAKDASLDDLLNYFKQFQEVENVIMRRYVEKSTKKRLFQGLYLLHSRLENQAE 691
R+ YAKGF D+ + +LL++ + +V N+ MR++ +K TK F+G L ++QA+
Sbjct: 149 RTAYAKGFPLDSQISELLDFAANYDKVVNLTMRKHYDKPTKSYKFKGSIFLTFETKDQAK 208
Query: 692 KFLD 703
FL+
Sbjct: 209 AFLE 212
Score = 32.3 bits (70), Expect = 0.79
Identities = 12/39 (30%), Positives = 23/39 (58%)
Frame = +1
Query: 649 GSVFATFQTREPGRKVFGCQRAQFGDNELLTLWAGDFLR 765
GS+F TF+T++ + ++ + + ELL W D+L+
Sbjct: 195 GSIFLTFETKDQAKAFLEQEKIVYKERELLRKWQVDYLK 233
>AY075257-1|AAL68124.1| 390|Drosophila melanogaster AT22034p
protein.
Length = 390
Score = 111 bits (266), Expect = 1e-24
Identities = 53/85 (62%), Positives = 64/85 (75%), Gaps = 1/85 (1%)
Frame = +3
Query: 255 FGDVNLHRDKFLQEQI-KLDDGWVPLEILTKFNRLAKLTEDTDVIANALNKSTSGLLEVS 431
FGD NL+RDKFL+EQI K +DGWVPL +L F RLA L+ D I ALNKS GL+E+S
Sbjct: 62 FGDANLNRDKFLREQIGKNEDGWVPLSVLVTFKRLASLSTDLSEIVAALNKSEEGLVEIS 121
Query: 432 EDNKKVRRNPEQPLPEMNEELRKEI 506
ED +RR+PE+P+PE NEE RKEI
Sbjct: 122 EDKLSLRRHPERPIPEHNEERRKEI 146
Score = 52.0 bits (119), Expect = 9e-07
Identities = 23/64 (35%), Positives = 40/64 (62%)
Frame = +2
Query: 512 RSIYAKGFAKDASLDDLLNYFKQFQEVENVIMRRYVEKSTKKRLFQGLYLLHSRLENQAE 691
R+ YAKGF D+ + +LL++ + +V N+ MR++ +K TK F+G L ++QA+
Sbjct: 149 RTAYAKGFPLDSQISELLDFAANYDKVVNLTMRKHYDKPTKSYKFKGSIFLTFETKDQAK 208
Query: 692 KFLD 703
FL+
Sbjct: 209 AFLE 212
Score = 32.3 bits (70), Expect = 0.79
Identities = 12/39 (30%), Positives = 23/39 (58%)
Frame = +1
Query: 649 GSVFATFQTREPGRKVFGCQRAQFGDNELLTLWAGDFLR 765
GS+F TF+T++ + ++ + + ELL W D+L+
Sbjct: 195 GSIFLTFETKDQAKAFLEQEKIVYKERELLRKWQVDYLK 233
>AE014134-3230|AAN11073.1| 390|Drosophila melanogaster CG10922-PB,
isoform B protein.
Length = 390
Score = 111 bits (266), Expect = 1e-24
Identities = 53/85 (62%), Positives = 64/85 (75%), Gaps = 1/85 (1%)
Frame = +3
Query: 255 FGDVNLHRDKFLQEQI-KLDDGWVPLEILTKFNRLAKLTEDTDVIANALNKSTSGLLEVS 431
FGD NL+RDKFL+EQI K +DGWVPL +L F RLA L+ D I ALNKS GL+E+S
Sbjct: 62 FGDANLNRDKFLREQIGKNEDGWVPLSVLVTFKRLASLSTDLSEIVAALNKSEEGLVEIS 121
Query: 432 EDNKKVRRNPEQPLPEMNEELRKEI 506
ED +RR+PE+P+PE NEE RKEI
Sbjct: 122 EDKLSLRRHPERPIPEHNEERRKEI 146
Score = 52.0 bits (119), Expect = 9e-07
Identities = 23/64 (35%), Positives = 40/64 (62%)
Frame = +2
Query: 512 RSIYAKGFAKDASLDDLLNYFKQFQEVENVIMRRYVEKSTKKRLFQGLYLLHSRLENQAE 691
R+ YAKGF D+ + +LL++ + +V N+ MR++ +K TK F+G L ++QA+
Sbjct: 149 RTAYAKGFPLDSQISELLDFAANYDKVVNLTMRKHYDKPTKSYKFKGSIFLTFETKDQAK 208
Query: 692 KFLD 703
FL+
Sbjct: 209 AFLE 212
Score = 32.3 bits (70), Expect = 0.79
Identities = 12/39 (30%), Positives = 23/39 (58%)
Frame = +1
Query: 649 GSVFATFQTREPGRKVFGCQRAQFGDNELLTLWAGDFLR 765
GS+F TF+T++ + ++ + + ELL W D+L+
Sbjct: 195 GSIFLTFETKDQAKAFLEQEKIVYKERELLRKWQVDYLK 233
>AE014134-3229|AAF53885.1| 390|Drosophila melanogaster CG10922-PA,
isoform A protein.
Length = 390
Score = 111 bits (266), Expect = 1e-24
Identities = 53/85 (62%), Positives = 64/85 (75%), Gaps = 1/85 (1%)
Frame = +3
Query: 255 FGDVNLHRDKFLQEQI-KLDDGWVPLEILTKFNRLAKLTEDTDVIANALNKSTSGLLEVS 431
FGD NL+RDKFL+EQI K +DGWVPL +L F RLA L+ D I ALNKS GL+E+S
Sbjct: 62 FGDANLNRDKFLREQIGKNEDGWVPLSVLVTFKRLASLSTDLSEIVAALNKSEEGLVEIS 121
Query: 432 EDNKKVRRNPEQPLPEMNEELRKEI 506
ED +RR+PE+P+PE NEE RKEI
Sbjct: 122 EDKLSLRRHPERPIPEHNEERRKEI 146
Score = 52.0 bits (119), Expect = 9e-07
Identities = 23/64 (35%), Positives = 40/64 (62%)
Frame = +2
Query: 512 RSIYAKGFAKDASLDDLLNYFKQFQEVENVIMRRYVEKSTKKRLFQGLYLLHSRLENQAE 691
R+ YAKGF D+ + +LL++ + +V N+ MR++ +K TK F+G L ++QA+
Sbjct: 149 RTAYAKGFPLDSQISELLDFAANYDKVVNLTMRKHYDKPTKSYKFKGSIFLTFETKDQAK 208
Query: 692 KFLD 703
FL+
Sbjct: 209 AFLE 212
Score = 32.3 bits (70), Expect = 0.79
Identities = 12/39 (30%), Positives = 23/39 (58%)
Frame = +1
Query: 649 GSVFATFQTREPGRKVFGCQRAQFGDNELLTLWAGDFLR 765
GS+F TF+T++ + ++ + + ELL W D+L+
Sbjct: 195 GSIFLTFETKDQAKAFLEQEKIVYKERELLRKWQVDYLK 233
>AY061107-1|AAL28655.1| 595|Drosophila melanogaster LD09531p
protein.
Length = 595
Score = 61.7 bits (143), Expect = 1e-09
Identities = 33/72 (45%), Positives = 45/72 (62%)
Frame = +3
Query: 255 FGDVNLHRDKFLQEQIKLDDGWVPLEILTKFNRLAKLTEDTDVIANALNKSTSGLLEVSE 434
FGD NL +D+FL+ ++ D +VPLEI FN++ LT+D IA AL S S LLE+ E
Sbjct: 71 FGDANLSKDRFLRRYVE-QDPYVPLEIFLTFNKIKTLTQDVQQIAKAL--SNSQLLELDE 127
Query: 435 DNKKVRRNPEQP 470
KV+R + P
Sbjct: 128 TELKVKRRTKLP 139
>AF219009-1|AAF27644.1| 595|Drosophila melanogaster multi-sex-combs
protein.
Length = 595
Score = 61.7 bits (143), Expect = 1e-09
Identities = 33/72 (45%), Positives = 45/72 (62%)
Frame = +3
Query: 255 FGDVNLHRDKFLQEQIKLDDGWVPLEILTKFNRLAKLTEDTDVIANALNKSTSGLLEVSE 434
FGD NL +D+FL+ ++ D +VPLEI FN++ LT+D IA AL S S LLE+ E
Sbjct: 71 FGDANLSKDRFLRRYVE-QDPYVPLEIFLTFNKIKTLTQDVQQIAKAL--SNSQLLELDE 127
Query: 435 DNKKVRRNPEQP 470
KV+R + P
Sbjct: 128 TELKVKRRTKLP 139
>AE014298-1312|AAF46473.1| 595|Drosophila melanogaster CG12058-PA
protein.
Length = 595
Score = 61.7 bits (143), Expect = 1e-09
Identities = 33/72 (45%), Positives = 45/72 (62%)
Frame = +3
Query: 255 FGDVNLHRDKFLQEQIKLDDGWVPLEILTKFNRLAKLTEDTDVIANALNKSTSGLLEVSE 434
FGD NL +D+FL+ ++ D +VPLEI FN++ LT+D IA AL S S LLE+ E
Sbjct: 71 FGDANLSKDRFLRRYVE-QDPYVPLEIFLTFNKIKTLTQDVQQIAKAL--SNSQLLELDE 127
Query: 435 DNKKVRRNPEQP 470
KV+R + P
Sbjct: 128 TELKVKRRTKLP 139
>AE014297-4227|AAN14139.1| 965|Drosophila melanogaster CG14066-PB,
isoform B protein.
Length = 965
Score = 39.5 bits (88), Expect = 0.005
Identities = 31/88 (35%), Positives = 47/88 (53%), Gaps = 6/88 (6%)
Frame = +3
Query: 267 NLHRDKFLQEQIKLDDGWVPLEILTKFNRLAKLTEDTDVIANALNKSTSGLLEVSEDNKK 446
NL D FL+ ++ +G++P+ ++ F+R+ LT D VI NA+ +S LE+ E K
Sbjct: 37 NLTGDFFLRRKMD-PEGYIPVTLIASFHRVLALTTDVAVIVNAIKESDK--LELFE-GYK 92
Query: 447 VRRN------PEQPLPEMNEELRKEI*T 512
VR P +PE+NE K I T
Sbjct: 93 VRTKTTPTTWPITEVPEVNEGEPKAIGT 120
>AE014297-4226|AAF56783.3| 965|Drosophila melanogaster CG14066-PA,
isoform A protein.
Length = 965
Score = 39.5 bits (88), Expect = 0.005
Identities = 31/88 (35%), Positives = 47/88 (53%), Gaps = 6/88 (6%)
Frame = +3
Query: 267 NLHRDKFLQEQIKLDDGWVPLEILTKFNRLAKLTEDTDVIANALNKSTSGLLEVSEDNKK 446
NL D FL+ ++ +G++P+ ++ F+R+ LT D VI NA+ +S LE+ E K
Sbjct: 37 NLTGDFFLRRKMD-PEGYIPVTLIASFHRVLALTTDVAVIVNAIKESDK--LELFE-GYK 92
Query: 447 VRRN------PEQPLPEMNEELRKEI*T 512
VR P +PE+NE K I T
Sbjct: 93 VRTKTTPTTWPITEVPEVNEGEPKAIGT 120
>AE014297-4225|AAN14138.4| 1403|Drosophila melanogaster CG14066-PC,
isoform C protein.
Length = 1403
Score = 39.5 bits (88), Expect = 0.005
Identities = 31/88 (35%), Positives = 47/88 (53%), Gaps = 6/88 (6%)
Frame = +3
Query: 267 NLHRDKFLQEQIKLDDGWVPLEILTKFNRLAKLTEDTDVIANALNKSTSGLLEVSEDNKK 446
NL D FL+ ++ +G++P+ ++ F+R+ LT D VI NA+ +S LE+ E K
Sbjct: 475 NLTGDFFLRRKMD-PEGYIPVTLIASFHRVLALTTDVAVIVNAIKESDK--LELFE-GYK 530
Query: 447 VRRN------PEQPLPEMNEELRKEI*T 512
VR P +PE+NE K I T
Sbjct: 531 VRTKTTPTTWPITEVPEVNEGEPKAIGT 558
>BT010118-1|AAQ22587.1| 961|Drosophila melanogaster AT27581p
protein.
Length = 961
Score = 38.3 bits (85), Expect = 0.012
Identities = 22/68 (32%), Positives = 37/68 (54%)
Frame = +3
Query: 255 FGDVNLHRDKFLQEQIKLDDGWVPLEILTKFNRLAKLTEDTDVIANALNKSTSGLLEVSE 434
F NL D +L Q+ D +VP+ + +FN + KLT D ++I L +S + ++V +
Sbjct: 273 FSRENLANDTYLLSQMDSDQ-YVPIYTVARFNLVRKLTNDINLITEVLRESPN--VQVDD 329
Query: 435 DNKKVRRN 458
+VR N
Sbjct: 330 KGLRVRPN 337
>AY113653-1|AAM29658.1| 269|Drosophila melanogaster SD18087p
protein.
Length = 269
Score = 38.3 bits (85), Expect = 0.012
Identities = 25/76 (32%), Positives = 43/76 (56%), Gaps = 2/76 (2%)
Frame = +3
Query: 267 NLHRDKFLQEQIKLDDGWVPLEILTKFNRLAKLTEDTDVIANALNKSTSGLLEVSEDNK- 443
NL D FL+ ++ +G++P+ ++ F+R+ LT D VI NA+ +S LE+ E K
Sbjct: 37 NLTGDFFLRRKMD-PEGYIPVTLIASFHRVLALTTDVAVIVNAIKESDK--LELFEGYKV 93
Query: 444 KVRRNPEQ-PLPEMNE 488
+ + P P+ E+ E
Sbjct: 94 RTKTTPTTWPITEVPE 109
>AF221108-1|AAF35862.1| 1403|Drosophila melanogaster La related
protein protein.
Length = 1403
Score = 38.3 bits (85), Expect = 0.012
Identities = 25/76 (32%), Positives = 43/76 (56%), Gaps = 2/76 (2%)
Frame = +3
Query: 267 NLHRDKFLQEQIKLDDGWVPLEILTKFNRLAKLTEDTDVIANALNKSTSGLLEVSEDNK- 443
NL D FL+ ++ +G++P+ ++ F+R+ LT D VI NA+ +S LE+ E K
Sbjct: 475 NLTGDFFLRRKMD-PEGYIPVTLIASFHRVLALTTDVAVIVNAIKESDK--LELFEGYKV 531
Query: 444 KVRRNPEQ-PLPEMNE 488
+ + P P+ E+ E
Sbjct: 532 RTKTTPTTWPITEVPE 547
>AE014296-611|AAS64955.1| 958|Drosophila melanogaster CG11505-PC,
isoform C protein.
Length = 958
Score = 38.3 bits (85), Expect = 0.012
Identities = 22/68 (32%), Positives = 37/68 (54%)
Frame = +3
Query: 255 FGDVNLHRDKFLQEQIKLDDGWVPLEILTKFNRLAKLTEDTDVIANALNKSTSGLLEVSE 434
F NL D +L Q+ D +VP+ + +FN + KLT D ++I L +S + ++V +
Sbjct: 270 FSRENLANDTYLLSQMDSDQ-YVPIYTVARFNLVRKLTNDINLITEVLRESPN--VQVDD 326
Query: 435 DNKKVRRN 458
+VR N
Sbjct: 327 KGLRVRPN 334
>AE014296-610|AAF47745.1| 1521|Drosophila melanogaster CG11505-PA,
isoform A protein.
Length = 1521
Score = 38.3 bits (85), Expect = 0.012
Identities = 22/68 (32%), Positives = 37/68 (54%)
Frame = +3
Query: 255 FGDVNLHRDKFLQEQIKLDDGWVPLEILTKFNRLAKLTEDTDVIANALNKSTSGLLEVSE 434
F NL D +L Q+ D +VP+ + +FN + KLT D ++I L +S + ++V +
Sbjct: 270 FSRENLANDTYLLSQMDSDQ-YVPIYTVARFNLVRKLTNDINLITEVLRESPN--VQVDD 326
Query: 435 DNKKVRRN 458
+VR N
Sbjct: 327 KGLRVRPN 334
>AE014296-609|AAG22237.2| 1531|Drosophila melanogaster CG11505-PB,
isoform B protein.
Length = 1531
Score = 38.3 bits (85), Expect = 0.012
Identities = 22/68 (32%), Positives = 37/68 (54%)
Frame = +3
Query: 255 FGDVNLHRDKFLQEQIKLDDGWVPLEILTKFNRLAKLTEDTDVIANALNKSTSGLLEVSE 434
F NL D +L Q+ D +VP+ + +FN + KLT D ++I L +S + ++V +
Sbjct: 280 FSRENLANDTYLLSQMDSDQ-YVPIYTVARFNLVRKLTNDINLITEVLRESPN--VQVDD 336
Query: 435 DNKKVRRN 458
+VR N
Sbjct: 337 KGLRVRPN 344
>AY095055-1|AAM11383.1| 1349|Drosophila melanogaster LD43045p
protein.
Length = 1349
Score = 31.5 bits (68), Expect = 1.4
Identities = 14/53 (26%), Positives = 30/53 (56%)
Frame = +1
Query: 631 KETLVPGSVFATFQTREPGRKVFGCQRAQFGDNELLTLWAGDFLRPETRRIFP 789
+++ V GSV + + +P +K G +++ G++E+L + +RP T + P
Sbjct: 785 EDSPVVGSVSQSTEANKPSQKNDGAAKSRGGESEVLDVGKTSSVRPTTHEVIP 837
>AE014297-3192|AAF56027.3| 1346|Drosophila melanogaster CG31158-PA,
isoform A protein.
Length = 1346
Score = 29.9 bits (64), Expect = 4.2
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = +3
Query: 333 ILTKFNRLAKLTEDTDVIANALNKSTSGLLEVSEDNKKVRRNPEQ 467
I +NR LT DT ++ L G + EDNK+ R+ +Q
Sbjct: 387 INNSYNRKDSLTNDTLLMCEELEPDEEGEYVLEEDNKQQRQRQQQ 431
>AE014297-3191|AAO41590.1| 1480|Drosophila melanogaster CG31158-PB,
isoform B protein.
Length = 1480
Score = 29.9 bits (64), Expect = 4.2
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = +3
Query: 333 ILTKFNRLAKLTEDTDVIANALNKSTSGLLEVSEDNKKVRRNPEQ 467
I +NR LT DT ++ L G + EDNK+ R+ +Q
Sbjct: 387 INNSYNRKDSLTNDTLLMCEELEPDEEGEYVLEEDNKQQRQRQQQ 431
>AY118662-1|AAM50031.1| 642|Drosophila melanogaster SD10038p
protein.
Length = 642
Score = 29.1 bits (62), Expect = 7.4
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = -1
Query: 367 VSLARRLNFVRISNGTHPSSNFICSCRNLSRCRFTSPNNIRL 242
+SLAR +++ +SN H + N S C SPN+ R+
Sbjct: 529 ISLARCMSWTVLSNSNHLGIGKVEPLGNASSCLLASPNSDRM 570
>AF289995-1|AAG02460.1| 642|Drosophila melanogaster thyroid hormone
receptor-associatedprotein TRAP80 protein.
Length = 642
Score = 29.1 bits (62), Expect = 7.4
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = -1
Query: 367 VSLARRLNFVRISNGTHPSSNFICSCRNLSRCRFTSPNNIRL 242
+SLAR +++ +SN H + N S C SPN+ R+
Sbjct: 529 ISLARCMSWTVLSNSNHLGIGKVEPLGNASSCLLASPNSDRM 570
>AF244916-1|AAF63336.1| 642|Drosophila melanogaster mediator
transcriptional cofactorTRAP80 protein.
Length = 642
Score = 29.1 bits (62), Expect = 7.4
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = -1
Query: 367 VSLARRLNFVRISNGTHPSSNFICSCRNLSRCRFTSPNNIRL 242
+SLAR +++ +SN H + N S C SPN+ R+
Sbjct: 529 ISLARCMSWTVLSNSNHLGIGKVEPLGNASSCLLASPNSDRM 570
>AE014297-2456|AAF55506.1| 642|Drosophila melanogaster CG7957-PA
protein.
Length = 642
Score = 29.1 bits (62), Expect = 7.4
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = -1
Query: 367 VSLARRLNFVRISNGTHPSSNFICSCRNLSRCRFTSPNNIRL 242
+SLAR +++ +SN H + N S C SPN+ R+
Sbjct: 529 ISLARCMSWTVLSNSNHLGIGKVEPLGNASSCLLASPNSDRM 570
>AY051469-1|AAK92893.1| 446|Drosophila melanogaster GH13594p
protein.
Length = 446
Score = 28.7 bits (61), Expect = 9.8
Identities = 18/70 (25%), Positives = 30/70 (42%)
Frame = +2
Query: 50 ALPCIS*LRSLNKLVF*NQKVFSIKEKSK*PRTKR*LLKPMDKRRTRKPKIQKTKPNWIL 229
A+ C+S + + +++ S + S R L P +RR R K + NW+
Sbjct: 286 AISCLSGAKFMGQVITVLPAYLSTRRGSVRYSYPRELNAPEHQRRQRAMKWKPAIDNWVC 345
Query: 230 RLFGKSNIIW 259
L SN +W
Sbjct: 346 MLCRNSNFVW 355
>AE014297-1363|AAF54686.3| 446|Drosophila melanogaster CG14718-PA
protein.
Length = 446
Score = 28.7 bits (61), Expect = 9.8
Identities = 18/70 (25%), Positives = 30/70 (42%)
Frame = +2
Query: 50 ALPCIS*LRSLNKLVF*NQKVFSIKEKSK*PRTKR*LLKPMDKRRTRKPKIQKTKPNWIL 229
A+ C+S + + +++ S + S R L P +RR R K + NW+
Sbjct: 286 AISCLSGAKFMGQVITVLPAYLSTRRGSVRYSYPRELNAPEHQRRQRAMKWKPAIDNWVC 345
Query: 230 RLFGKSNIIW 259
L SN +W
Sbjct: 346 MLCRNSNFVW 355
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,449,222
Number of Sequences: 53049
Number of extensions: 678707
Number of successful extensions: 2371
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 2077
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2363
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3736869864
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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