Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40094
         (802 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    27   0.20 
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    25   1.1  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    23   2.5  
AF134817-1|AAD40233.1|  105|Apis mellifera FABP-like protein pro...    23   4.4  
AB083011-1|BAC54132.1|  135|Apis mellifera fatty acid binding pr...    23   4.4  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          22   5.8  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      22   5.8  

>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 27.1 bits (57), Expect = 0.20
 Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
 Frame = -3

Query: 800 LSLTGKILL-VSGLRKSPAQSVNSSLSPNWALWHPKTFLPGSLVW 669
           + L G  L  ++G+  S A  +  +LS N   W    F+PG+L W
Sbjct: 531 IRLDGNFLSDINGVFTSIASLLLLNLSENHIEWFDYAFIPGNLKW 575


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 24.6 bits (51), Expect = 1.1
 Identities = 13/39 (33%), Positives = 17/39 (43%)
 Frame = +1

Query: 142 EDKEVTVETNGQEENAKTENSEDETELDIAIIRQVEYYL 258
           E  + +V T   +EN KTE   DE        R   YY+
Sbjct: 301 EISQNSVSTGSDKENHKTEEPNDEVATYDNTPRDFPYYM 339


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 23.4 bits (48), Expect = 2.5
 Identities = 9/18 (50%), Positives = 14/18 (77%)
 Frame = -3

Query: 686 PGSLVWNVANTDPGTSVS 633
           PGS++ N+A+T  G SV+
Sbjct: 390 PGSIIENIAHTRSGYSVA 407


>AF134817-1|AAD40233.1|  105|Apis mellifera FABP-like protein
           protein.
          Length = 105

 Score = 22.6 bits (46), Expect = 4.4
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = -1

Query: 124 FNGKYLLISENKFIEASKL 68
           F GK+  +S+N F E +K+
Sbjct: 2   FEGKFQFVSQNNFEEFAKV 20


>AB083011-1|BAC54132.1|  135|Apis mellifera fatty acid binding
           protein protein.
          Length = 135

 Score = 22.6 bits (46), Expect = 4.4
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = -1

Query: 124 FNGKYLLISENKFIEASKL 68
           F GK+  +S+N F E +K+
Sbjct: 4   FEGKFQFVSQNNFEEFAKV 22


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 22.2 bits (45), Expect = 5.8
 Identities = 10/32 (31%), Positives = 16/32 (50%)
 Frame = +2

Query: 503 NMNRSIYAKGFAKDASLDDLLNYFKQFQEVEN 598
           N +  IY     +  ++D L+ YF+QF    N
Sbjct: 440 NKDEIIYPNLKIESFTVDKLITYFEQFDTTIN 471


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 22.2 bits (45), Expect = 5.8
 Identities = 10/32 (31%), Positives = 16/32 (50%)
 Frame = +2

Query: 503 NMNRSIYAKGFAKDASLDDLLNYFKQFQEVEN 598
           N +  IY     +  ++D L+ YF+QF    N
Sbjct: 440 NKDEIIYPNLKIESFTVDKLITYFEQFDTTIN 471


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 210,422
Number of Sequences: 438
Number of extensions: 4092
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25367793
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)