Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40093
(834 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q7L5N1 Cluster: COP9 signalosome complex subunit 6; n=3... 126 9e-28
UniRef50_Q8W206 Cluster: COP9 signalosome complex subunit 6a; n=... 70 6e-11
UniRef50_UPI00015555C0 Cluster: PREDICTED: similar to 150 kDa ox... 66 8e-10
UniRef50_Q2PQ73 Cluster: COP9 signalosome complex subunit 6; n=2... 62 1e-08
UniRef50_Q2MJW1 Cluster: COP9 signalosome subunit 6; n=1; Chlamy... 62 2e-08
UniRef50_Q4PGX0 Cluster: Putative uncharacterized protein; n=1; ... 60 9e-08
UniRef50_Q5KF20 Cluster: COP9 complex subunit 6, putative; n=2; ... 58 2e-07
UniRef50_Q6C7M5 Cluster: Similar to tr|O15387 Homo sapiens MOV34... 43 0.011
UniRef50_Q95PZ0 Cluster: COP9 signalosome complex subunit 6; n=2... 42 0.019
UniRef50_A4RKP2 Cluster: Putative uncharacterized protein; n=2; ... 39 0.13
UniRef50_Q2H2Z2 Cluster: Putative uncharacterized protein; n=1; ... 36 1.7
UniRef50_A2DP46 Cluster: Clan MP, family M67, Poh1-like metallop... 35 2.2
UniRef50_Q7S8C8 Cluster: Putative uncharacterized protein NCU070... 35 2.2
UniRef50_Q5CW89 Cluster: Proteine kinase; n=3; Cryptosporidium|R... 34 5.1
UniRef50_Q9ALM2 Cluster: Polyketide synthase extender modules 8-... 33 6.7
UniRef50_Q2QLZ5 Cluster: Mov34/MPN/PAD-1 family protein, express... 33 6.7
UniRef50_Q08723 Cluster: 26S proteasome regulatory subunit RPN8;... 33 6.7
UniRef50_Q2QM04 Cluster: Mov34/MPN/PAD-1 family protein, express... 33 8.8
UniRef50_A2R9A6 Cluster: Complex: COPS6 of M. musculus forms par... 33 8.8
>UniRef50_Q7L5N1 Cluster: COP9 signalosome complex subunit 6; n=39;
Eumetazoa|Rep: COP9 signalosome complex subunit 6 - Homo
sapiens (Human)
Length = 327
Score = 126 bits (303), Expect = 9e-28
Identities = 67/133 (50%), Positives = 84/133 (63%)
Frame = +2
Query: 248 ITVVLYESVIDVVNGRATMLLAPLTYTLAAEEAERIGVDHVARVSSGEAALNSLVAEHLT 427
+ V ++ESVID++NG ATML A LTYTLA EEAERIGVDHVAR+++ + NS VAEHL
Sbjct: 163 LPVSVFESVIDIINGEATMLFAELTYTLATEEAERIGVDHVARMTATGSGENSTVAEHLI 222
Query: 428 AQRSAIKMLVSRVRAVLGDSTRYKGW*XXXXXXXXXXXXXXXXXXXXXTSQQFRTHFYNQ 607
AQ SAIKML SRV+ +L + ++ +F+T FY+Q
Sbjct: 223 AQHSAIKMLHSRVKLILEYVKASEAGEVPFNHEILREAYALCHCLPVLSTDKFKTDFYDQ 282
Query: 608 CNDVALMTYLGTI 646
CNDV LM YLGTI
Sbjct: 283 CNDVGLMAYLGTI 295
Score = 87.0 bits (206), Expect = 5e-16
Identities = 39/78 (50%), Positives = 49/78 (62%)
Frame = +3
Query: 12 NSFELVFSMXXXXXXXXXXYYNMKEEQFKQVFSDMDFLGWYTTGDAPSERDIAVHRQICD 191
NSFEL+ YY KEEQFKQVF +++FLGWYTTG P DI VH+Q+C+
Sbjct: 85 NSFELLSHTVEEKIIIDKEYYYTKEEQFKQVFKELEFLGWYTTGGPPDPSDIHVHKQVCE 144
Query: 192 INECPVMLMLNPAGRNGD 245
I E P+ L LNP ++ D
Sbjct: 145 IIESPLFLKLNPMTKHTD 162
Score = 45.6 bits (103), Expect = 0.002
Identities = 21/33 (63%), Positives = 24/33 (72%)
Frame = +3
Query: 648 TKGCNAIHQLVNRFNVLYDRQGHGEGACEGLFF 746
TK CN ++Q VN+FNVLYDRQG G GLFF
Sbjct: 296 TKTCNTMNQFVNKFNVLYDRQGIGR-RMRGLFF 327
>UniRef50_Q8W206 Cluster: COP9 signalosome complex subunit 6a; n=11;
Magnoliophyta|Rep: COP9 signalosome complex subunit 6a -
Arabidopsis thaliana (Mouse-ear cress)
Length = 317
Score = 70.1 bits (164), Expect = 6e-11
Identities = 46/135 (34%), Positives = 67/135 (49%), Gaps = 2/135 (1%)
Frame = +2
Query: 248 ITVVLYESVIDVVNGRATMLLAPLTYTLAAEEAERIGVDHVARV--SSGEAALNSLVAEH 421
+ V +YES + V++G ++ A +YT+ EAERI VDHVA + S G +A L A H
Sbjct: 153 LPVTIYESELHVIDGIPQLIFAHTSYTIETVEAERISVDHVAHLKPSDGGSAATQLAA-H 211
Query: 422 LTAQRSAIKMLVSRVRAVLGDSTRYKGW*XXXXXXXXXXXXXXXXXXXXXTSQQFRTHFY 601
LT SAIKML SR+R + + + S++F+ +F
Sbjct: 212 LTGIHSAIKMLNSRIRVLYQNLAAMQKGDKSCDNSVLRQVSSLLRRLPAMESERFQDNFL 271
Query: 602 NQCNDVALMTYLGTI 646
+ ND L+TYL I
Sbjct: 272 MEYNDKLLITYLAMI 286
Score = 65.3 bits (152), Expect = 2e-09
Identities = 30/73 (41%), Positives = 43/73 (58%)
Frame = +3
Query: 12 NSFELVFSMXXXXXXXXXXYYNMKEEQFKQVFSDMDFLGWYTTGDAPSERDIAVHRQICD 191
NSFEL++ + K+E +K+VF D LGWY+TG E D+ +H+ + D
Sbjct: 75 NSFELLYD--PSTQTLDRSFLEKKQELYKKVFPDFYILGWYSTGSDAEESDMHIHKALMD 132
Query: 192 INECPVMLMLNPA 230
INE PV ++LNPA
Sbjct: 133 INESPVYVLLNPA 145
>UniRef50_UPI00015555C0 Cluster: PREDICTED: similar to 150 kDa
oxygen-regulated protein ORP150, partial; n=1;
Ornithorhynchus anatinus|Rep: PREDICTED: similar to 150
kDa oxygen-regulated protein ORP150, partial -
Ornithorhynchus anatinus
Length = 234
Score = 66.5 bits (155), Expect = 8e-10
Identities = 30/57 (52%), Positives = 35/57 (61%)
Frame = +3
Query: 12 NSFELVFSMXXXXXXXXXXYYNMKEEQFKQVFSDMDFLGWYTTGDAPSERDIAVHRQ 182
NSFEL+ YY KEEQFKQVF +++FLGWYTTG P DI VH+Q
Sbjct: 178 NSFELLSHTVEEKIVIDKEYYYTKEEQFKQVFKELEFLGWYTTGGPPEPSDIHVHKQ 234
>UniRef50_Q2PQ73 Cluster: COP9 signalosome complex subunit 6; n=2;
Dictyostelium discoideum|Rep: COP9 signalosome complex
subunit 6 - Dictyostelium discoideum (Slime mold)
Length = 309
Score = 62.5 bits (145), Expect = 1e-08
Identities = 41/145 (28%), Positives = 67/145 (46%)
Frame = +2
Query: 212 VDVESGRQKW*SITVVLYESVIDVVNGRATMLLAPLTYTLAAEEAERIGVDHVARVSSGE 391
+D +S + K + V++YES + +VN T + Y + EAERIGV+H+A+V+
Sbjct: 140 LDTDSPKSK--DLPVIIYESELHIVNDEPTTIFVKTPYKIQTGEAERIGVNHIAKVTPSG 197
Query: 392 AALNSLVAEHLTAQRSAIKMLVSRVRAVLGDSTRYKGW*XXXXXXXXXXXXXXXXXXXXX 571
+ + L + HL +AI ML RV+A+ K
Sbjct: 198 SEGSGLTS-HLFTMHNAISMLNIRVKALSDYLQAVKEKRLPYEQNILRKASSLCNQLPTI 256
Query: 572 TSQQFRTHFYNQCNDVALMTYLGTI 646
+ F+ + + NDV L+TYL +I
Sbjct: 257 DTHDFKKSYLQEYNDVLLVTYLASI 281
Score = 58.0 bits (134), Expect = 3e-07
Identities = 30/81 (37%), Positives = 43/81 (53%)
Frame = +3
Query: 12 NSFELVFSMXXXXXXXXXXYYNMKEEQFKQVFSDMDFLGWYTTGDAPSERDIAVHRQICD 191
NSFE+V++ Y K ++Q+F D LGWY+TG S+ DI +H+QI +
Sbjct: 74 NSFEMVYATVDKQLVLDIEYLRKK---YEQLFPLYDLLGWYSTGSQVSKDDILLHKQISE 130
Query: 192 INECPVMLMLNPAGRNGDQLP 254
NE P+ LML+ LP
Sbjct: 131 HNESPLYLMLDTDSPKSKDLP 151
>UniRef50_Q2MJW1 Cluster: COP9 signalosome subunit 6; n=1;
Chlamydomonas reinhardtii|Rep: COP9 signalosome subunit
6 - Chlamydomonas reinhardtii
Length = 314
Score = 61.7 bits (143), Expect = 2e-08
Identities = 30/74 (40%), Positives = 45/74 (60%), Gaps = 1/74 (1%)
Frame = +3
Query: 12 NSFELVFSMXXXXXXXXXXYYNMK-EEQFKQVFSDMDFLGWYTTGDAPSERDIAVHRQIC 188
NSFE+ ++ Y +K +EQ+KQVF ++D +GWY TG A +E HR+I
Sbjct: 66 NSFEVRYAAGPDGTLDIDITYLLKKQEQYKQVFKNLDVVGWYATGAAITEGHRLAHRKIS 125
Query: 189 DINECPVMLMLNPA 230
++ E PV L+L+PA
Sbjct: 126 EVVESPVFLLLDPA 139
Score = 50.4 bits (115), Expect = 5e-05
Identities = 30/88 (34%), Positives = 49/88 (55%), Gaps = 3/88 (3%)
Frame = +2
Query: 248 ITVVLYESVIDVV--NGRATMLLAPLTYTLAAEEAERIGVDHVARV-SSGEAALNSLVAE 418
+ V LYE+ + + G M+ Y++ +AERIGVD VAR+ + G+A + ++
Sbjct: 147 LPVSLYETELHLSPETGAPGMVFVKSPYSIETSDAERIGVDQVARILAGGKATGSEQLSA 206
Query: 419 HLTAQRSAIKMLVSRVRAVLGDSTRYKG 502
L + SAIKML+ R+R + G + G
Sbjct: 207 QLVSLHSAIKMLLERLRVIHGAMGKVAG 234
>UniRef50_Q4PGX0 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 438
Score = 59.7 bits (138), Expect = 9e-08
Identities = 26/75 (34%), Positives = 43/75 (57%), Gaps = 3/75 (4%)
Frame = +3
Query: 9 ENSFEL---VFSMXXXXXXXXXXYYNMKEEQFKQVFSDMDFLGWYTTGDAPSERDIAVHR 179
+NSFE+ S + ++ Q+KQVF +D LGWYT G+ P+ +D+ VH+
Sbjct: 81 QNSFEIRLDAASSTSLAPIINHAFLRSRQAQYKQVFPTLDLLGWYTVGEVPTPQDLEVHK 140
Query: 180 QICDINECPVMLMLN 224
Q+ NE P+++ L+
Sbjct: 141 QLLAYNETPLLVQLH 155
Score = 52.4 bits (120), Expect = 1e-05
Identities = 26/77 (33%), Positives = 41/77 (53%)
Frame = +2
Query: 248 ITVVLYESVIDVVNGRATMLLAPLTYTLAAEEAERIGVDHVARVSSGEAALNSLVAEHLT 427
+ + +YESV+++V G T P Y + EAERI VD+ ++ + + + +
Sbjct: 170 LPIRVYESVVELVQGETTNFFVPAGYKIETGEAERIAVDYASKAGAESGGDHDSMLAGMQ 229
Query: 428 AQRSAIKMLVSRVRAVL 478
AQ SAI L R+R VL
Sbjct: 230 AQHSAITKLNDRIRQVL 246
>UniRef50_Q5KF20 Cluster: COP9 complex subunit 6, putative; n=2;
Filobasidiella neoformans|Rep: COP9 complex subunit 6,
putative - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 355
Score = 58.4 bits (135), Expect = 2e-07
Identities = 23/60 (38%), Positives = 36/60 (60%)
Frame = +3
Query: 69 YYNMKEEQFKQVFSDMDFLGWYTTGDAPSERDIAVHRQICDINECPVMLMLNPAGRNGDQ 248
+ +++QFKQVF +D +GWY+ G PS DI++H Q E P+ L+ +P +G Q
Sbjct: 101 FLETRKDQFKQVFPTLDVIGWYSVGKEPSSDDISLHAQFASSVETPIFLLFDPDPASGTQ 160
Score = 51.2 bits (117), Expect = 3e-05
Identities = 50/173 (28%), Positives = 76/173 (43%), Gaps = 5/173 (2%)
Frame = +2
Query: 209 DVDVESGRQKW*SITVVLYES--VIDV---VNGRATMLLAPLTYTLAAEEAERIGVDHVA 373
D D SG Q ++ + +YES V D ++G + L Y + EAERI VD VA
Sbjct: 152 DPDPASGTQ---ALPLKIYESATVTDTTGEISGEGKFV--ELEYGIETGEAERIAVDGVA 206
Query: 374 RVSSGEAALNSLVAEHLTAQRSAIKMLVSRVRAVLGDSTRYKGW*XXXXXXXXXXXXXXX 553
+ +GE ++ VA HLT QR+AIKML R+ +L T
Sbjct: 207 KGGAGEE--DTAVA-HLTTQRNAIKMLYDRIEILLKYVTGVVNKSAKPDYSILRRISSLV 263
Query: 554 XXXXXXTSQQFRTHFYNQCNDVALMTYLGTIHEGLQRYPSACE*IQRALRQTR 712
+ +FR + +DV + +YL T+ + L C +Q + T+
Sbjct: 264 ATLPTMDAGEFREELITEYSDVQISSYLTTLTKQLNVLSEVCYALQHLILATK 316
>UniRef50_Q6C7M5 Cluster: Similar to tr|O15387 Homo sapiens MOV34
ISOLOG; n=1; Yarrowia lipolytica|Rep: Similar to
tr|O15387 Homo sapiens MOV34 ISOLOG - Yarrowia
lipolytica (Candida lipolytica)
Length = 312
Score = 42.7 bits (96), Expect = 0.011
Identities = 21/58 (36%), Positives = 35/58 (60%), Gaps = 3/58 (5%)
Frame = +3
Query: 90 QFKQVFSDMDFLGW-YTTGDAPSERDIAVH--RQICDINECPVMLMLNPAGRNGDQLP 254
QF+QV ++ F+GW Y + D S D H +Q+ + +E P++L++ P G + QLP
Sbjct: 77 QFQQVMPELHFVGWFYVSKDHTSPTDEVTHLQKQLMEFDEAPLVLLIQP-GSDSQQLP 133
Score = 39.9 bits (89), Expect = 0.077
Identities = 26/73 (35%), Positives = 41/73 (56%)
Frame = +2
Query: 260 LYESVIDVVNGRATMLLAPLTYTLAAEEAERIGVDHVARVSSGEAALNSLVAEHLTAQRS 439
+YE +ID +G A T + EAER+ V+ + R +S AA + V +HL +Q +
Sbjct: 136 VYEPIID--SGETKYREA--TVVIETGEAERVAVEDLVRETSQHAA-SERVRQHLVSQHA 190
Query: 440 AIKMLVSRVRAVL 478
A+K+ RV+ VL
Sbjct: 191 AVKIFNGRVKTVL 203
>UniRef50_Q95PZ0 Cluster: COP9 signalosome complex subunit 6; n=2;
Caenorhabditis|Rep: COP9 signalosome complex subunit 6 -
Caenorhabditis elegans
Length = 426
Score = 41.9 bits (94), Expect = 0.019
Identities = 20/56 (35%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Frame = +2
Query: 314 PLTYTLAAEEAERIGVDHVARVSSGEAALNSLVA-EHLTAQRSAIKMLVSRVRAVL 478
P+ + L +EE+ER+GV+H+A++S+ V +H AQ +A+ ML +RV ++
Sbjct: 169 PIEWILVSEESERVGVNHIAKLSTKHGKDGKSVGKKHAEAQDAAMSMLQNRVDLIV 224
>UniRef50_A4RKP2 Cluster: Putative uncharacterized protein; n=2;
Sordariomycetes|Rep: Putative uncharacterized protein -
Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 421
Score = 39.1 bits (87), Expect = 0.13
Identities = 27/90 (30%), Positives = 44/90 (48%), Gaps = 8/90 (8%)
Frame = +3
Query: 9 ENSFE-LVFSMXXXXXXXXXXYYNMKEEQFKQVFSD--MDFLGWYTT--GDAPSERDIAV 173
E++FE L S+ ++ + +Q K V D +D +GW+T P +R + +
Sbjct: 64 EHAFECLTQSLPNGDLSLDQDWFTNRLDQMKLVHKDRNLDLVGWFTLLPRAGPDQRLLQL 123
Query: 174 HRQICDINECPVMLMLNP---AGRNGDQLP 254
H QI +NE +L L+P A G +LP
Sbjct: 124 HNQILAVNESAALLALHPEDIAAAAGSKLP 153
>UniRef50_Q2H2Z2 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 441
Score = 35.5 bits (78), Expect = 1.7
Identities = 25/72 (34%), Positives = 37/72 (51%), Gaps = 10/72 (13%)
Frame = +3
Query: 69 YYNMKEEQFKQVFSD--MDFLGWYTTGD--APSERDIAVHRQICDINECPVML------M 218
++ + EQ K V +D +GWY+ PS + +HRQI +NE V+L M
Sbjct: 85 WFGQRLEQMKLVHKSPALDLVGWYSLVPKAGPSALHLPIHRQISALNESAVLLGFHIEDM 144
Query: 219 LNPAGRNGDQLP 254
L P+ +GD LP
Sbjct: 145 LAPS--SGDPLP 154
>UniRef50_A2DP46 Cluster: Clan MP, family M67, Poh1-like
metallopeptidase; n=2; Trichomonas vaginalis G3|Rep:
Clan MP, family M67, Poh1-like metallopeptidase -
Trichomonas vaginalis G3
Length = 311
Score = 35.1 bits (77), Expect = 2.2
Identities = 17/63 (26%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
Frame = +3
Query: 75 NMKEEQF---KQVFSDMDFLGWYTTGDAPSERDIAVHRQICDINECPVMLMLNPAGRNGD 245
N EE + K+V +GWY++ S D+ +HR++CD P+ L + +
Sbjct: 76 NFIEEMYSLHKKVTLKEKIIGWYSSLATVSPNDLEIHRKMCDYCPDPIFLTTDVGASDPH 135
Query: 246 QLP 254
++P
Sbjct: 136 EIP 138
>UniRef50_Q7S8C8 Cluster: Putative uncharacterized protein
NCU07019.1; n=1; Neurospora crassa|Rep: Putative
uncharacterized protein NCU07019.1 - Neurospora crassa
Length = 497
Score = 35.1 bits (77), Expect = 2.2
Identities = 26/92 (28%), Positives = 40/92 (43%), Gaps = 10/92 (10%)
Frame = +3
Query: 9 ENSFELVFSMXXXXXXXXXXYYNMKEEQFKQVFSD--MDFLGWYT--TGDAPSERDIAVH 176
E+SF + ++ + +Q K V D +DF+GWYT P++ + +H
Sbjct: 63 EHSFSVKTEHTGQNYKVDSEWFTARLDQMKAVHKDRALDFVGWYTLVPKSGPTDAHLPIH 122
Query: 177 RQICDINECPVML------MLNPAGRNGDQLP 254
NE V+L +LNP GD LP
Sbjct: 123 SYFYSQNESAVLLGFHIHEILNPVA--GDPLP 152
>UniRef50_Q5CW89 Cluster: Proteine kinase; n=3; Cryptosporidium|Rep:
Proteine kinase - Cryptosporidium parvum Iowa II
Length = 730
Score = 33.9 bits (74), Expect = 5.1
Identities = 12/41 (29%), Positives = 25/41 (60%)
Frame = -2
Query: 722 FPMPLSVVEHVESIHKLMDSVAALRESFLSMSSGLHRCIDY 600
F +PLS + E+ H+++D++ L+E + + + C+DY
Sbjct: 73 FAIPLS--NNTENRHRILDNIVKLKEKLIKIKENISACVDY 111
>UniRef50_Q9ALM2 Cluster: Polyketide synthase extender modules 8-10;
n=4; Actinomycetales|Rep: Polyketide synthase extender
modules 8-10 - Saccharopolyspora spinosa
Length = 5588
Score = 33.5 bits (73), Expect = 6.7
Identities = 22/86 (25%), Positives = 40/86 (46%), Gaps = 3/86 (3%)
Frame = +2
Query: 212 VDVESGRQKW*SITVVLYESVIDVVNGRATMLLAPLTYTLAAEEAERI---GVDHVARVS 382
VDV+ + W ++ + + + + L +AAE++ RI G D +S
Sbjct: 1351 VDVDGTAESWRALAAAVRSGEPQLALRAGEVRVPRLARCVAAEDS-RIPVPGADGTVLIS 1409
Query: 383 SGEAALNSLVAEHLTAQRSAIKMLVS 460
G L LVA HL A+R +++++
Sbjct: 1410 GGTGLLGGLVARHLVAERGVRRLVLA 1435
>UniRef50_Q2QLZ5 Cluster: Mov34/MPN/PAD-1 family protein, expressed;
n=3; Oryza sativa|Rep: Mov34/MPN/PAD-1 family protein,
expressed - Oryza sativa subsp. japonica (Rice)
Length = 499
Score = 33.5 bits (73), Expect = 6.7
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 10/59 (16%)
Frame = +3
Query: 84 EEQFKQVFSDMDFLGWYTTG------DAPSER----DIAVHRQICDINECPVMLMLNPA 230
+E +K+ F D+ LGWY+ G D D+ +H+ + D N L+LNPA
Sbjct: 87 QEIYKKAFPDLSVLGWYSIGTNVHATDTGIHHGDYTDMQIHQTLMDANGTAFYLLLNPA 145
>UniRef50_Q08723 Cluster: 26S proteasome regulatory subunit RPN8;
n=27; Eukaryota|Rep: 26S proteasome regulatory subunit
RPN8 - Saccharomyces cerevisiae (Baker's yeast)
Length = 338
Score = 33.5 bits (73), Expect = 6.7
Identities = 21/54 (38%), Positives = 33/54 (61%)
Frame = +2
Query: 317 LTYTLAAEEAERIGVDHVARVSSGEAALNSLVAEHLTAQRSAIKMLVSRVRAVL 478
L T+ AEEAE IGV+H+ R +AA ++ LT Q ++K L S+++ V+
Sbjct: 157 LPCTIEAEEAEEIGVEHLLRDVRDQAA--GGLSIRLTNQLKSLKGLQSKLKDVV 208
>UniRef50_Q2QM04 Cluster: Mov34/MPN/PAD-1 family protein, expressed;
n=5; Oryza sativa|Rep: Mov34/MPN/PAD-1 family protein,
expressed - Oryza sativa subsp. japonica (Rice)
Length = 549
Score = 33.1 bits (72), Expect = 8.8
Identities = 14/50 (28%), Positives = 25/50 (50%)
Frame = +3
Query: 81 KEEQFKQVFSDMDFLGWYTTGDAPSERDIAVHRQICDINECPVMLMLNPA 230
K E +K+ F + LGWY+ + D+ ++ + D + L+ NPA
Sbjct: 130 KLETYKKAFPGLAILGWYSIDTHVTNTDMETNQALMDASGTTFYLLFNPA 179
>UniRef50_A2R9A6 Cluster: Complex: COPS6 of M. musculus forms part
of the heterooctameric COP9 complex; n=1; Aspergillus
niger|Rep: Complex: COPS6 of M. musculus forms part of
the heterooctameric COP9 complex - Aspergillus niger
Length = 387
Score = 33.1 bits (72), Expect = 8.8
Identities = 26/72 (36%), Positives = 36/72 (50%), Gaps = 13/72 (18%)
Frame = +2
Query: 299 TMLLAPLTYTLAAEEAERIGVDHVARV-------SSGEAALNSLVA------EHLTAQRS 439
T+ L Y++ EAE IGVD VAR + G A+L A +HLT + +
Sbjct: 184 TIRFRELPYSVETGEAEMIGVDTVARTARNAAADTQGTASLTKQSAGKEPSKDHLTTRLN 243
Query: 440 AIKMLVSRVRAV 475
AIK L SR+ +
Sbjct: 244 AIKTLESRISLI 255
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 729,346,998
Number of Sequences: 1657284
Number of extensions: 13230832
Number of successful extensions: 32970
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 31956
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32957
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 72553824147
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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