Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40093
         (834 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY070607-1|AAL48078.1|  341|Drosophila melanogaster RE71054p pro...   119   4e-27
AE014297-3186|AAF56022.1|  341|Drosophila melanogaster CG6932-PA...   119   4e-27
AY089283-1|AAL90021.1|  338|Drosophila melanogaster AT07973p pro...    31   1.9  
AE013599-3862|AAF47199.1|  338|Drosophila melanogaster CG3416-PA...    31   1.9  
M64643-1|AAA28695.1|  338|Drosophila melanogaster Mov34 protein.       29   7.8  
AY058634-1|AAL13863.1|  382|Drosophila melanogaster LD33276p pro...    29   7.8  
AL109630-8|CAB51688.1|  382|Drosophila melanogaster EG:BACR7A4.1...    29   7.8  
AE014298-131|AAF45570.1|  382|Drosophila melanogaster CG3704-PA ...    29   7.8  

>AY070607-1|AAL48078.1|  341|Drosophila melanogaster RE71054p
           protein.
          Length = 341

 Score =  119 bits (287), Expect = 4e-27
 Identities = 64/132 (48%), Positives = 81/132 (61%)
 Frame = +2

Query: 260 LYESVIDVVNGRATMLLAPLTYTLAAEEAERIGVDHVARVSSGEAALNSLVAEHLTAQRS 439
           L+ES+ID+V+G ATML  PLTYTLA EEAERIGVDHVAR++S E+   S+VAEHL AQ S
Sbjct: 181 LFESLIDLVDGEATMLFVPLTYTLATEEAERIGVDHVARMTSNESGEKSVVAEHLVAQDS 240

Query: 440 AIKMLVSRVRAVLGDSTRYKGW*XXXXXXXXXXXXXXXXXXXXXTSQQFRTHFYNQCNDV 619
           AIKML +R++ VL      +                            F+  FY QCNDV
Sbjct: 241 AIKMLNTRIKIVLQYIRDVEAGKLRANQEILREAYALCHRLPVMQVPAFQEEFYTQCNDV 300

Query: 620 ALMTYLGTIHEG 655
            L++YLGT+ +G
Sbjct: 301 GLISYLGTLTKG 312



 Score =  104 bits (249), Expect = 2e-22
 Identities = 46/81 (56%), Positives = 55/81 (67%)
 Frame = +3

Query: 12  NSFELVFSMXXXXXXXXXXYYNMKEEQFKQVFSDMDFLGWYTTGDAPSERDIAVHRQICD 191
           NSFEL   +          YYN KE+Q+KQVFSD+DF+GWYTTGD P+  DI + RQI  
Sbjct: 98  NSFELKTDVIGDETVINKDYYNKKEQQYKQVFSDLDFIGWYTTGDNPTADDIKIQRQIAA 157

Query: 192 INECPVMLMLNPAGRNGDQLP 254
           INECP+ML LNP  R+ D LP
Sbjct: 158 INECPIMLQLNPLSRSVDHLP 178



 Score = 43.6 bits (98), Expect = 3e-04
 Identities = 18/33 (54%), Positives = 23/33 (69%)
 Frame = +3

Query: 648 TKGCNAIHQLVNRFNVLYDRQGHGEGACEGLFF 746
           TKGCN +H  VN+FN+LYDRQG       GL++
Sbjct: 310 TKGCNDMHHFVNKFNMLYDRQGSAR-RMRGLYY 341


>AE014297-3186|AAF56022.1|  341|Drosophila melanogaster CG6932-PA
           protein.
          Length = 341

 Score =  119 bits (287), Expect = 4e-27
 Identities = 64/132 (48%), Positives = 81/132 (61%)
 Frame = +2

Query: 260 LYESVIDVVNGRATMLLAPLTYTLAAEEAERIGVDHVARVSSGEAALNSLVAEHLTAQRS 439
           L+ES+ID+V+G ATML  PLTYTLA EEAERIGVDHVAR++S E+   S+VAEHL AQ S
Sbjct: 181 LFESLIDLVDGEATMLFVPLTYTLATEEAERIGVDHVARMTSNESGEKSVVAEHLVAQDS 240

Query: 440 AIKMLVSRVRAVLGDSTRYKGW*XXXXXXXXXXXXXXXXXXXXXTSQQFRTHFYNQCNDV 619
           AIKML +R++ VL      +                            F+  FY QCNDV
Sbjct: 241 AIKMLNTRIKIVLQYIRDVEAGKLRANQEILREAYALCHRLPVMQVPAFQEEFYTQCNDV 300

Query: 620 ALMTYLGTIHEG 655
            L++YLGT+ +G
Sbjct: 301 GLISYLGTLTKG 312



 Score =  104 bits (249), Expect = 2e-22
 Identities = 46/81 (56%), Positives = 55/81 (67%)
 Frame = +3

Query: 12  NSFELVFSMXXXXXXXXXXYYNMKEEQFKQVFSDMDFLGWYTTGDAPSERDIAVHRQICD 191
           NSFEL   +          YYN KE+Q+KQVFSD+DF+GWYTTGD P+  DI + RQI  
Sbjct: 98  NSFELKTDVIGDETVINKDYYNKKEQQYKQVFSDLDFIGWYTTGDNPTADDIKIQRQIAA 157

Query: 192 INECPVMLMLNPAGRNGDQLP 254
           INECP+ML LNP  R+ D LP
Sbjct: 158 INECPIMLQLNPLSRSVDHLP 178



 Score = 43.6 bits (98), Expect = 3e-04
 Identities = 18/33 (54%), Positives = 23/33 (69%)
 Frame = +3

Query: 648 TKGCNAIHQLVNRFNVLYDRQGHGEGACEGLFF 746
           TKGCN +H  VN+FN+LYDRQG       GL++
Sbjct: 310 TKGCNDMHHFVNKFNMLYDRQGSAR-RMRGLYY 341


>AY089283-1|AAL90021.1|  338|Drosophila melanogaster AT07973p
           protein.
          Length = 338

 Score = 31.1 bits (67), Expect = 1.9
 Identities = 26/106 (24%), Positives = 45/106 (42%)
 Frame = +2

Query: 329 LAAEEAERIGVDHVARVSSGEAALNSLVAEHLTAQRSAIKMLVSRVRAVLGDSTRYKGW* 508
           + AEEAE +GV+H+ R    +  + SL ++ +T Q   +K L +++R +     R     
Sbjct: 165 IGAEEAEEVGVEHLLR-DIKDTTVGSL-SQKITNQLMGLKGLNAQLRDIKQYLQRVGDSK 222

Query: 509 XXXXXXXXXXXXXXXXXXXXXTSQQFRTHFYNQCNDVALMTYLGTI 646
                                T+ QF    Y + ND  L+ YL ++
Sbjct: 223 MPINHQIVYQLQDIFNLLPDITNDQFTGTMYVKTNDQMLVVYLASM 268


>AE013599-3862|AAF47199.1|  338|Drosophila melanogaster CG3416-PA
           protein.
          Length = 338

 Score = 31.1 bits (67), Expect = 1.9
 Identities = 26/106 (24%), Positives = 45/106 (42%)
 Frame = +2

Query: 329 LAAEEAERIGVDHVARVSSGEAALNSLVAEHLTAQRSAIKMLVSRVRAVLGDSTRYKGW* 508
           + AEEAE +GV+H+ R    +  + SL ++ +T Q   +K L +++R +     R     
Sbjct: 165 IGAEEAEEVGVEHLLR-DIKDTTVGSL-SQKITNQLMGLKGLNAQLRDIKQYLQRVGDSK 222

Query: 509 XXXXXXXXXXXXXXXXXXXXXTSQQFRTHFYNQCNDVALMTYLGTI 646
                                T+ QF    Y + ND  L+ YL ++
Sbjct: 223 MPINHQIVYQLQDIFNLLPDITNDQFTGTMYVKTNDQMLVVYLASM 268


>M64643-1|AAA28695.1|  338|Drosophila melanogaster Mov34 protein.
          Length = 338

 Score = 29.1 bits (62), Expect = 7.8
 Identities = 25/106 (23%), Positives = 44/106 (41%)
 Frame = +2

Query: 329 LAAEEAERIGVDHVARVSSGEAALNSLVAEHLTAQRSAIKMLVSRVRAVLGDSTRYKGW* 508
           +  EEAE +GV+H+ R    +  + SL ++ +T Q   +K L +++R +     R     
Sbjct: 165 IGPEEAEEVGVEHLLR-DIKDTTVGSL-SQKITNQLMGLKGLNAQLRDIKQYLQRVGDSK 222

Query: 509 XXXXXXXXXXXXXXXXXXXXXTSQQFRTHFYNQCNDVALMTYLGTI 646
                                T+ QF    Y + ND  L+ YL ++
Sbjct: 223 MPINHQIVYQLQDIFNLLPDITNDQFTGTMYVKTNDQMLVVYLASM 268


>AY058634-1|AAL13863.1|  382|Drosophila melanogaster LD33276p
           protein.
          Length = 382

 Score = 29.1 bits (62), Expect = 7.8
 Identities = 16/50 (32%), Positives = 27/50 (54%)
 Frame = +2

Query: 290 GRATMLLAPLTYTLAAEEAERIGVDHVARVSSGEAALNSLVAEHLTAQRS 439
           G +  L+AP     +AE  +   ++  A+ ++ E   +S V  HLTAQ+S
Sbjct: 319 GNSIFLMAPSLVPESAEIEDEEEMEEDAKGTAEEQNFHSFVQNHLTAQQS 368


>AL109630-8|CAB51688.1|  382|Drosophila melanogaster EG:BACR7A4.17
           protein.
          Length = 382

 Score = 29.1 bits (62), Expect = 7.8
 Identities = 16/50 (32%), Positives = 27/50 (54%)
 Frame = +2

Query: 290 GRATMLLAPLTYTLAAEEAERIGVDHVARVSSGEAALNSLVAEHLTAQRS 439
           G +  L+AP     +AE  +   ++  A+ ++ E   +S V  HLTAQ+S
Sbjct: 319 GNSIFLMAPSLVPESAEIEDEEEMEEDAKGTAEEQNFHSFVQNHLTAQQS 368


>AE014298-131|AAF45570.1|  382|Drosophila melanogaster CG3704-PA
           protein.
          Length = 382

 Score = 29.1 bits (62), Expect = 7.8
 Identities = 16/50 (32%), Positives = 27/50 (54%)
 Frame = +2

Query: 290 GRATMLLAPLTYTLAAEEAERIGVDHVARVSSGEAALNSLVAEHLTAQRS 439
           G +  L+AP     +AE  +   ++  A+ ++ E   +S V  HLTAQ+S
Sbjct: 319 GNSIFLMAPSLVPESAEIEDEEEMEEDAKGTAEEQNFHSFVQNHLTAQQS 368


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,314,350
Number of Sequences: 53049
Number of extensions: 645032
Number of successful extensions: 1553
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1485
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1553
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3962724636
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)