Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40092
         (808 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q86QT4 Cluster: Putative uncharacterized protein; n=1; ...    44   0.006
UniRef50_A5C4N1 Cluster: Putative uncharacterized protein; n=1; ...    34   4.8  
UniRef50_A0NAG5 Cluster: ENSANGP00000029993; n=1; Anopheles gamb...    34   4.8  
UniRef50_Q46633 Cluster: Amylovoran biosynthesis protein amsC; n...    34   4.8  
UniRef50_Q7RT48 Cluster: Putative uncharacterized protein PY0015...    33   6.4  
UniRef50_Q2JU59 Cluster: ISSoc4, transposase orfAB; n=18; Synech...    33   8.5  

>UniRef50_Q86QT4 Cluster: Putative uncharacterized protein; n=1;
          Bombyx mori|Rep: Putative uncharacterized protein -
          Bombyx mori (Silk moth)
          Length = 47

 Score = 43.6 bits (98), Expect = 0.006
 Identities = 20/22 (90%), Positives = 20/22 (90%)
 Frame = -2

Query: 66 LKLGNGWTDLANFGLELFVEVQ 1
          LKL NGWTDLANFGLEL VEVQ
Sbjct: 20 LKLENGWTDLANFGLELPVEVQ 41


>UniRef50_A5C4N1 Cluster: Putative uncharacterized protein; n=1;
           Vitis vinifera|Rep: Putative uncharacterized protein -
           Vitis vinifera (Grape)
          Length = 400

 Score = 33.9 bits (74), Expect = 4.8
 Identities = 15/46 (32%), Positives = 25/46 (54%)
 Frame = +2

Query: 83  IHFYIYRLMQCYFIAWQIFILSVTYYFLILDMPSVCVSKSAKPYKR 220
           +H +  R  +CY I W+  I++VT  +++LD P+    K  K   R
Sbjct: 180 VHVHPKRFPRCYEIDWKSRIIAVTESYVVLDKPAGTSEKKVKKLYR 225


>UniRef50_A0NAG5 Cluster: ENSANGP00000029993; n=1; Anopheles gambiae
           str. PEST|Rep: ENSANGP00000029993 - Anopheles gambiae
           str. PEST
          Length = 294

 Score = 33.9 bits (74), Expect = 4.8
 Identities = 25/73 (34%), Positives = 39/73 (53%), Gaps = 4/73 (5%)
 Frame = +2

Query: 470 IKIKRFTDNLPGVIILRLKASFI-YIFLFYCQFIVDCTH-*GDICHVLLSVFQXFVLMIT 643
           +KIKRF + +PG I   L   FI Y+F FY + I       G I  ++L +    + +I 
Sbjct: 205 LKIKRFREAIPGAIFSTLLFGFITYVFAFYVRDIARYNFLYGSIGSIILVMIWVNLNIIL 264

Query: 644 LLV--ELNKSLKQ 676
           +L   ELN ++K+
Sbjct: 265 ILFGNELNLAIKK 277


>UniRef50_Q46633 Cluster: Amylovoran biosynthesis protein amsC; n=2;
           Erwinia|Rep: Amylovoran biosynthesis protein amsC -
           Erwinia amylovora (Fire blight bacteria)
          Length = 375

 Score = 33.9 bits (74), Expect = 4.8
 Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
 Frame = +2

Query: 95  IYRLMQCYFI-AWQIFILSVTYYFLILDMPSVCVSKSAKPYKRYDPLIL 238
           IYR    + + AW     +   YF +L +  + VS +A  YK+Y PLIL
Sbjct: 85  IYRYENFFMVLAWVASCFTHESYFFLLFISFIAVSTNAWVYKKYSPLIL 133


>UniRef50_Q7RT48 Cluster: Putative uncharacterized protein PY00153;
           n=2; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein PY00153 - Plasmodium yoelii yoelii
          Length = 869

 Score = 33.5 bits (73), Expect = 6.4
 Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
 Frame = +2

Query: 5   TSTNNSRPKLAKSVQPFPS-FSESRTAIHFYIYRLMQCYFIAWQIFILSVTYYFLI 169
           + TNN   KL+K  +  P+  +E  T  H+    + QC F  +Q+FI    ++ LI
Sbjct: 811 SKTNNRNHKLSKRNRYLPNNMNEENTKYHYNTASVTQCKFNFFQVFIGITIFHILI 866


>UniRef50_Q2JU59 Cluster: ISSoc4, transposase orfAB; n=18;
           Synechococcus|Rep: ISSoc4, transposase orfAB -
           Synechococcus sp. (strain JA-3-3Ab) (Cyanobacteria
           bacteriumYellowstone A-Prime)
          Length = 315

 Score = 33.1 bits (72), Expect = 8.5
 Identities = 14/44 (31%), Positives = 27/44 (61%)
 Frame = +1

Query: 253 SYEIGNRSLVEIAKQFNISKSVLHRHVTRTMKSQGGHKKRLHNK 384
           +Y+ GN S+ ++AK+F ++K  +HR V +  ++Q    K+   K
Sbjct: 15  AYQAGNTSIRQVAKRFMVTKRTVHRWVRQYQQTQDLAPKKAGTK 58


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 736,890,805
Number of Sequences: 1657284
Number of extensions: 13877838
Number of successful extensions: 26788
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 25848
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26778
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 69554636255
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)