Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40092
         (808 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    27   0.90 
U50479-1|AAA93478.1|  151|Anopheles gambiae protein ( Anopheles ...    26   1.2  
AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-sign...    24   4.8  
CR954257-6|CAJ14157.1|  375|Anopheles gambiae RrnaAD, ribosomal ...    24   6.3  

>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
            channel alpha1 subunit protein.
          Length = 1893

 Score = 26.6 bits (56), Expect = 0.90
 Identities = 16/40 (40%), Positives = 18/40 (45%)
 Frame = +2

Query: 2    WTSTNNSRPKLAKSVQPFPSFSESRTAIHFYIYRLMQCYF 121
            W  TN   PKL   V P P   +  T   FY   L+Q YF
Sbjct: 1542 WKRTN---PKLLDQVVPPPGVDDEVTVGKFYATFLIQDYF 1578


>U50479-1|AAA93478.1|  151|Anopheles gambiae protein ( Anopheles
           gambiae putativeribosomal protein S13 mRNA, complete
           cds. ).
          Length = 151

 Score = 26.2 bits (55), Expect = 1.2
 Identities = 13/28 (46%), Positives = 17/28 (60%)
 Frame = +2

Query: 179 PSVCVSKSAKPYKRYDPLILKTAIEAMK 262
           P   +SKSA PY+R  P  LK + E +K
Sbjct: 7   PGKGISKSALPYRRSVPSWLKLSAEDVK 34


>AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative
           FGF-signaling promoter protein.
          Length = 1197

 Score = 24.2 bits (50), Expect = 4.8
 Identities = 9/42 (21%), Positives = 19/42 (45%)
 Frame = -2

Query: 699 IWLGLALLCFNDLFSSTNKVIINTXH*KTDKSTWQMSPQWVQ 574
           +W+    +CF+ +     ++     H K D+   Q +P  +Q
Sbjct: 224 LWVNHLKVCFDKITKQRGRLPFKFLHIKLDEDVVQQTPHIIQ 265


>CR954257-6|CAJ14157.1|  375|Anopheles gambiae RrnaAD, ribosomal RNA
           adenine dimethylaseprotein.
          Length = 375

 Score = 23.8 bits (49), Expect = 6.3
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +2

Query: 362 TKKDYIININIFSEWG 409
           +  DY+ N NIF+E+G
Sbjct: 293 SSNDYVDNFNIFTEFG 308


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 780,395
Number of Sequences: 2352
Number of extensions: 16305
Number of successful extensions: 17
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 85239615
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)