Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40092
         (808 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF144379-1|AAD34586.1|  543|Apis mellifera glutamate transporter...    24   1.4  
DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor p...    22   5.8  
DQ091183-1|AAZ42363.1|  128|Apis mellifera lipophorin receptor p...    22   5.8  
AB073998-1|BAC76402.1|  339|Apis mellifera preprotachykinin prot...    22   7.7  
AB073995-1|BAC76399.1|  301|Apis mellifera preprotachykinin prot...    22   7.7  

>AF144379-1|AAD34586.1|  543|Apis mellifera glutamate transporter
           Am-EAAT protein.
          Length = 543

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 12/44 (27%), Positives = 19/44 (43%)
 Frame = +2

Query: 392 IFSEWGYPLDSYDLLIIIMGLLDRVRIKIKRFTDNLPGVIILRL 523
           + +  G P +   LL  +  +LDR+R  I    D     I+  L
Sbjct: 452 VLTALGLPTNDISLLFAVDWMLDRIRTSINVLGDGYGAGIVYHL 495


>DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor
           protein.
          Length = 157

 Score = 22.2 bits (45), Expect = 5.8
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -2

Query: 147 DNINICQAMK*HCINL 100
           D +N CQA+  HC +L
Sbjct: 31  DGMNQCQAVNGHCSHL 46


>DQ091183-1|AAZ42363.1|  128|Apis mellifera lipophorin receptor
           protein.
          Length = 128

 Score = 22.2 bits (45), Expect = 5.8
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -2

Query: 147 DNINICQAMK*HCINL 100
           D +N CQA+  HC +L
Sbjct: 31  DGMNQCQAVNGHCSHL 46


>AB073998-1|BAC76402.1|  339|Apis mellifera preprotachykinin
           protein.
          Length = 339

 Score = 21.8 bits (44), Expect = 7.7
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = -1

Query: 775 KNGXSLFRRTRLGLRGMK 722
           ++G   F+R R+G  GM+
Sbjct: 246 ESGSESFKRARMGFHGMR 263


>AB073995-1|BAC76399.1|  301|Apis mellifera preprotachykinin
           protein.
          Length = 301

 Score = 21.8 bits (44), Expect = 7.7
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = -1

Query: 775 KNGXSLFRRTRLGLRGMK 722
           ++G   F+R R+G  GM+
Sbjct: 246 ESGSESFKRARMGFHGMR 263


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 213,507
Number of Sequences: 438
Number of extensions: 4295
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25610547
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)