Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40091
         (492 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    22   2.6  
AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esteras...    21   4.6  
AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esteras...    21   4.6  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   6.1  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    21   8.0  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    21   8.0  

>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 22.2 bits (45), Expect = 2.6
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +1

Query: 253 RRYPTPSRERERCPSH 300
           RR P P+R R   P+H
Sbjct: 329 RRGPGPARSRRHLPAH 344


>AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esterase
           protein.
          Length = 515

 Score = 21.4 bits (43), Expect = 4.6
 Identities = 9/30 (30%), Positives = 17/30 (56%)
 Frame = +3

Query: 312 VRKEIKDQSEGTQDAENK*GGFAMVHFNLF 401
           V K+I+D   G  ++EN    F ++H + +
Sbjct: 347 VAKKIRDFYYGGPNSENNLDNFYLIHTDTY 376


>AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esterase
           protein.
          Length = 517

 Score = 21.4 bits (43), Expect = 4.6
 Identities = 9/30 (30%), Positives = 17/30 (56%)
 Frame = +3

Query: 312 VRKEIKDQSEGTQDAENK*GGFAMVHFNLF 401
           V K+I+D   G  ++EN    F ++H + +
Sbjct: 349 VAKKIRDFYYGGPNSENNLDNFYLIHTDTY 378


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 21.0 bits (42), Expect = 6.1
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +2

Query: 32   TKSIWTCSTSRRKR 73
            T+ IW CS   RK+
Sbjct: 1169 TEGIWICSLIHRKK 1182


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 20.6 bits (41), Expect = 8.0
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = -3

Query: 427 ISLIQTILWNKLKCTIAKPPYL 362
           +S I   +W+KL  T  KPP L
Sbjct: 110 VSCISEEVWSKLIETGNKPPTL 131


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 20.6 bits (41), Expect = 8.0
 Identities = 6/16 (37%), Positives = 11/16 (68%)
 Frame = -3

Query: 394 LKCTIAKPPYLFSASW 347
           ++CT++K  Y  + SW
Sbjct: 623 VQCTVSKGDYPLNISW 638


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,862
Number of Sequences: 336
Number of extensions: 2058
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11525470
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)