Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40090
         (846 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    25   1.00 
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    25   1.00 
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    23   3.0  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    23   4.0  
DQ855496-1|ABH88183.1|  129|Tribolium castaneum chemosensory pro...    22   7.0  
AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    22   7.0  
AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax pr...    22   7.0  
AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax pr...    22   7.0  
AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax pr...    22   7.0  
AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax pr...    22   7.0  
AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax pr...    22   7.0  
AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.           22   7.0  
AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax pr...    22   7.0  
AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduce...    22   7.0  

>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 24.6 bits (51), Expect = 1.00
 Identities = 10/33 (30%), Positives = 19/33 (57%)
 Frame = -3

Query: 781 ASKHAFGISATEKLFMVAFSAEMNWRVRDQWEV 683
           A++H F   + E+   +  S +M  +VR++W V
Sbjct: 2   AARHRFATGSPEETEPLYSSTQMPEKVREKWNV 34


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 24.6 bits (51), Expect = 1.00
 Identities = 10/33 (30%), Positives = 19/33 (57%)
 Frame = -3

Query: 781 ASKHAFGISATEKLFMVAFSAEMNWRVRDQWEV 683
           A++H F   + E+   +  S +M  +VR++W V
Sbjct: 2   AARHRFATGSPEETEPLYSSTQMPEKVREKWNV 34


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 9/28 (32%), Positives = 12/28 (42%)
 Frame = -1

Query: 270 WSASLRFCPKPNLRFPFQWCSDHGHSCW 187
           W ASL FC      F +    +  + CW
Sbjct: 164 WVASLAFCIPQLTIFTYTSVGEDEYDCW 191


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 9/19 (47%), Positives = 12/19 (63%), Gaps = 1/19 (5%)
 Frame = +3

Query: 765 NAC-FEARPNQMVKCDPRQ 818
           N+C  E  PN+ + CDP Q
Sbjct: 141 NSCTVETDPNRALDCDPTQ 159


>DQ855496-1|ABH88183.1|  129|Tribolium castaneum chemosensory
           protein 10 protein.
          Length = 129

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -3

Query: 79  RGTCLPAPVSLKKVLKES 26
           RGTC P    LKK L ++
Sbjct: 53  RGTCSPDGEELKKALPDA 70


>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 10/19 (52%), Positives = 11/19 (57%)
 Frame = +1

Query: 721 PRRLP*TAFPSPRFQTHAS 777
           P+RL  T   SP  QTH S
Sbjct: 78  PQRLASTHLQSPNTQTHPS 96


>AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 10/19 (52%), Positives = 11/19 (57%)
 Frame = +1

Query: 721 PRRLP*TAFPSPRFQTHAS 777
           P+RL  T   SP  QTH S
Sbjct: 78  PQRLASTHLQSPNTQTHPS 96


>AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax
           protein.
          Length = 230

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 10/19 (52%), Positives = 11/19 (57%)
 Frame = +1

Query: 721 PRRLP*TAFPSPRFQTHAS 777
           P+RL  T   SP  QTH S
Sbjct: 78  PQRLASTHLQSPNTQTHPS 96


>AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 10/19 (52%), Positives = 11/19 (57%)
 Frame = +1

Query: 721 PRRLP*TAFPSPRFQTHAS 777
           P+RL  T   SP  QTH S
Sbjct: 78  PQRLASTHLQSPNTQTHPS 96


>AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax
           protein.
          Length = 297

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 10/19 (52%), Positives = 11/19 (57%)
 Frame = +1

Query: 721 PRRLP*TAFPSPRFQTHAS 777
           P+RL  T   SP  QTH S
Sbjct: 78  PQRLASTHLQSPNTQTHPS 96


>AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax
           protein.
          Length = 268

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 10/19 (52%), Positives = 11/19 (57%)
 Frame = +1

Query: 721 PRRLP*TAFPSPRFQTHAS 777
           P+RL  T   SP  QTH S
Sbjct: 34  PQRLASTHLQSPNTQTHPS 52


>AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.
          Length = 312

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 10/19 (52%), Positives = 11/19 (57%)
 Frame = +1

Query: 721 PRRLP*TAFPSPRFQTHAS 777
           P+RL  T   SP  QTH S
Sbjct: 78  PQRLAPTHLQSPNTQTHPS 96


>AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax
           protein.
          Length = 157

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 10/19 (52%), Positives = 11/19 (57%)
 Frame = +1

Query: 721 PRRLP*TAFPSPRFQTHAS 777
           P+RL  T   SP  QTH S
Sbjct: 78  PQRLASTHLQSPNTQTHPS 96


>AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduced
           Scr protein.
          Length = 312

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 10/19 (52%), Positives = 11/19 (57%)
 Frame = +1

Query: 721 PRRLP*TAFPSPRFQTHAS 777
           P+RL  T   SP  QTH S
Sbjct: 78  PQRLASTHLQSPNTQTHPS 96


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 200,809
Number of Sequences: 336
Number of extensions: 4287
Number of successful extensions: 19
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23348025
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)