Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40090
(846 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY334011-1|AAR01136.1| 188|Anopheles gambiae beta-tubulin protein. 62 2e-11
AY334010-1|AAR01135.1| 188|Anopheles gambiae beta-tubulin protein. 62 2e-11
AY334009-1|AAR01134.1| 188|Anopheles gambiae beta-tubulin protein. 62 2e-11
AY334008-1|AAR01133.1| 188|Anopheles gambiae beta-tubulin protein. 62 2e-11
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p... 23 8.8
>AY334011-1|AAR01136.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 62.1 bits (144), Expect = 2e-11
Identities = 28/85 (32%), Positives = 47/85 (55%)
Frame = +2
Query: 254 RKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAVV 433
RK + C LQGF + H LL+ ++ +Y + +++ P+P+VS VV
Sbjct: 17 RKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVV 76
Query: 434 EPYNSILTTHTTLEHSDCAFMVDNE 508
EPYN+ L+ H +E++D + +DNE
Sbjct: 77 EPYNATLSIHQLVENTDETYCIDNE 101
Score = 50.4 bits (115), Expect = 7e-08
Identities = 23/58 (39%), Positives = 33/58 (56%)
Frame = +1
Query: 511 IYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQT*LGALTPYP 684
+YDIC R L + P+Y +LN L+ +S +T LRF G LN DL + + P+P
Sbjct: 103 LYDICFRTLKVPNPSYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAV---NMVPFP 157
Score = 25.0 bits (52), Expect = 2.9
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = +3
Query: 207 HYTIGKEIVDLVLD 248
HYT G E+VD VLD
Sbjct: 1 HYTEGAELVDAVLD 14
>AY334010-1|AAR01135.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 62.1 bits (144), Expect = 2e-11
Identities = 28/85 (32%), Positives = 47/85 (55%)
Frame = +2
Query: 254 RKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAVV 433
RK + C LQGF + H LL+ ++ +Y + +++ P+P+VS VV
Sbjct: 17 RKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVV 76
Query: 434 EPYNSILTTHTTLEHSDCAFMVDNE 508
EPYN+ L+ H +E++D + +DNE
Sbjct: 77 EPYNATLSIHQLVENTDETYCIDNE 101
Score = 50.4 bits (115), Expect = 7e-08
Identities = 23/58 (39%), Positives = 33/58 (56%)
Frame = +1
Query: 511 IYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQT*LGALTPYP 684
+YDIC R L + P+Y +LN L+ +S +T LRF G LN DL + + P+P
Sbjct: 103 LYDICFRTLKVPNPSYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAV---NMVPFP 157
Score = 25.0 bits (52), Expect = 2.9
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = +3
Query: 207 HYTIGKEIVDLVLD 248
HYT G E+VD VLD
Sbjct: 1 HYTEGAELVDAVLD 14
>AY334009-1|AAR01134.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 62.1 bits (144), Expect = 2e-11
Identities = 28/85 (32%), Positives = 47/85 (55%)
Frame = +2
Query: 254 RKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAVV 433
RK + C LQGF + H LL+ ++ +Y + +++ P+P+VS VV
Sbjct: 17 RKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVV 76
Query: 434 EPYNSILTTHTTLEHSDCAFMVDNE 508
EPYN+ L+ H +E++D + +DNE
Sbjct: 77 EPYNATLSIHQLVENTDETYCIDNE 101
Score = 50.4 bits (115), Expect = 7e-08
Identities = 23/58 (39%), Positives = 33/58 (56%)
Frame = +1
Query: 511 IYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQT*LGALTPYP 684
+YDIC R L + P+Y +LN L+ +S +T LRF G LN DL + + P+P
Sbjct: 103 LYDICFRTLKVPNPSYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAV---NMVPFP 157
Score = 25.0 bits (52), Expect = 2.9
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = +3
Query: 207 HYTIGKEIVDLVLD 248
HYT G E+VD VLD
Sbjct: 1 HYTEGAELVDAVLD 14
>AY334008-1|AAR01133.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 62.1 bits (144), Expect = 2e-11
Identities = 28/85 (32%), Positives = 47/85 (55%)
Frame = +2
Query: 254 RKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAVV 433
RK + C LQGF + H LL+ ++ +Y + +++ P+P+VS VV
Sbjct: 17 RKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVV 76
Query: 434 EPYNSILTTHTTLEHSDCAFMVDNE 508
EPYN+ L+ H +E++D + +DNE
Sbjct: 77 EPYNATLSIHQLVENTDETYCIDNE 101
Score = 50.4 bits (115), Expect = 7e-08
Identities = 23/58 (39%), Positives = 33/58 (56%)
Frame = +1
Query: 511 IYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQT*LGALTPYP 684
+YDIC R L + P+Y +LN L+ +S +T LRF G LN DL + + P+P
Sbjct: 103 LYDICFRTLKVPNPSYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAV---NMVPFP 157
Score = 25.0 bits (52), Expect = 2.9
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = +3
Query: 207 HYTIGKEIVDLVLD 248
HYT G E+VD VLD
Sbjct: 1 HYTEGAELVDAVLD 14
>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
protein.
Length = 3325
Score = 23.4 bits (48), Expect = 8.8
Identities = 10/33 (30%), Positives = 15/33 (45%)
Frame = +3
Query: 675 PVSTSHWSRTRQFISAEKATMNSFSVAEIPNAC 773
PV T W + FI + ++ S E+ AC
Sbjct: 22 PVQTFLWQQIAPFIRPKLGKLHEASCMELKEAC 54
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 912,431
Number of Sequences: 2352
Number of extensions: 19026
Number of successful extensions: 48
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 48
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 89718867
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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