Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40089
(828 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 143 2e-35
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 140 2e-34
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 137 2e-33
SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc... 115 7e-27
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 96 6e-21
SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch... 56 8e-09
SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces pom... 52 1e-07
SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces pombe... 35 0.012
SPAC22H12.02 |tfg3|taf14|transcription factor TFIIF complex subu... 29 1.1
SPBC336.12c |cdc10||MBF transcription factor complex subunit Cdc... 26 7.5
SPBC27.03 |meu25||sequence orphan|Schizosaccharomyces pombe|chr ... 25 9.9
SPAC16C9.06c |upf1||ATP-dependent RNA helicase Upf1|Schizosaccha... 25 9.9
SPBC947.05c |||ferric-chelate reductase |Schizosaccharomyces pom... 25 9.9
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 143 bits (347), Expect = 2e-35
Identities = 83/182 (45%), Positives = 97/182 (53%)
Frame = +1
Query: 247 GYHYSCVGVYKNGRVEIIANDQGNRITPSYVAFTQDGERLIGDAAKNQLTTNPENTVFDA 426
G YSCVG + N RVEIIANDQGNR TPSYVAFT D ERLIGDAAKNQ+ NP NT+FDA
Sbjct: 10 GTTYSCVGHFSNNRVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAMNPHNTIFDA 68
Query: 427 KRLIGREWSDQTVQHDVKFFPFKVVEKTANLMFKYKLHKATKYXXXXXXXXXXXXXXXXX 606
KRLIGR ++D VQ D+K +PFKV+EK + + + TK
Sbjct: 69 KRLIGRRFNDPEVQSDMKHWPFKVIEKDGKPLIQVEFKGETKTFTPEEISSMVLLKMRES 128
Query: 607 XXXXXXXXXXXXXXXXXXISMMLHVKQPKMLVQFLGLNVMRIINEPTAAAIAMA*QEGRR 786
+ K GLNV+RIINEPTAAAIA +
Sbjct: 129 AEAFLGGKVTDAVVTVPAYFNDSQRQATKDAGLIAGLNVLRIINEPTAAAIAYGLDRSNQ 188
Query: 787 EE 792
E
Sbjct: 189 HE 190
Score = 99 bits (238), Expect = 4e-22
Identities = 48/70 (68%), Positives = 56/70 (80%)
Frame = +3
Query: 504 KDSKPHVQVQTSQGDKVFAPEEISAMVLTKMKETAEAYLGKKVTHAVVTVPAYFNDAPRQ 683
KD KP +QV+ K F PEEIS+MVL KM+E+AEA+LG KVT AVVTVPAYFND+ RQ
Sbjct: 95 KDGKPLIQVEFKGETKTFTPEEISSMVLLKMRESAEAFLGGKVTDAVVTVPAYFNDSQRQ 154
Query: 684 ATKDAGTISG 713
ATKDAG I+G
Sbjct: 155 ATKDAGLIAG 164
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 140 bits (339), Expect = 2e-34
Identities = 81/172 (47%), Positives = 94/172 (54%)
Frame = +1
Query: 247 GYHYSCVGVYKNGRVEIIANDQGNRITPSYVAFTQDGERLIGDAAKNQLTTNPENTVFDA 426
G YSCVG + N RVEIIANDQGNR TPSYVAFT D ERLIGDAAKNQ+ NP NT+FDA
Sbjct: 10 GTTYSCVGHFSNNRVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAMNPHNTIFDA 68
Query: 427 KRLIGREWSDQTVQHDVKFFPFKVVEKTANLMFKYKLHKATKYXXXXXXXXXXXXXXXXX 606
KRLIGR++ D VQ D+K +PFKV+ K + + + TK
Sbjct: 69 KRLIGRKFDDPEVQSDMKHWPFKVISKDGKPVLQVEYKGETKTFTPEEISSMVLMKMRET 128
Query: 607 XXXXXXXXXXXXXXXXXXISMMLHVKQPKMLVQFLGLNVMRIINEPTAAAIA 762
+ K GLNV+RIINEPTAAAIA
Sbjct: 129 AEAYLGGKVTDAVVTVPAYFNDSQRQATKDAGLIAGLNVLRIINEPTAAAIA 180
Score = 102 bits (244), Expect = 7e-23
Identities = 50/70 (71%), Positives = 56/70 (80%)
Frame = +3
Query: 504 KDSKPHVQVQTSQGDKVFAPEEISAMVLTKMKETAEAYLGKKVTHAVVTVPAYFNDAPRQ 683
KD KP +QV+ K F PEEIS+MVL KM+ETAEAYLG KVT AVVTVPAYFND+ RQ
Sbjct: 95 KDGKPVLQVEYKGETKTFTPEEISSMVLMKMRETAEAYLGGKVTDAVVTVPAYFNDSQRQ 154
Query: 684 ATKDAGTISG 713
ATKDAG I+G
Sbjct: 155 ATKDAGLIAG 164
>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr
1|||Manual
Length = 663
Score = 137 bits (332), Expect = 2e-33
Identities = 80/190 (42%), Positives = 100/190 (52%)
Frame = +1
Query: 247 GYHYSCVGVYKNGRVEIIANDQGNRITPSYVAFTQDGERLIGDAAKNQLTTNPENTVFDA 426
G YSCV V KNGRVEIIANDQGNRITPSYVAFT+D ERL+G+AAKNQ +NPENT+FD
Sbjct: 43 GTTYSCVAVMKNGRVEIIANDQGNRITPSYVAFTED-ERLVGEAAKNQAPSNPENTIFDI 101
Query: 427 KRLIGREWSDQTVQHDVKFFPFKVVEKTANLMFKYKLHKATKYXXXXXXXXXXXXXXXXX 606
KRLIGR++ ++T+ D+K FPF +V + + + K
Sbjct: 102 KRLIGRKFDEKTMAKDIKSFPFHIVNDKNRPLVEVNVGGKKKKFTPEEISAMILSKMKQT 161
Query: 607 XXXXXXXXXXXXXXXXXXISMMLHVKQPKMLVQFLGLNVMRIINEPTAAAIAMA*QEGRR 786
+ K GLNV+RI+NEPTAAAIA +
Sbjct: 162 AEAYLGKPVTHAVVTVPAYFNDAQRQATKDAGTIAGLNVIRIVNEPTAAAIAYGLDKTDT 221
Query: 787 EEWFPVLGFG 816
E+ V G
Sbjct: 222 EKHIVVYDLG 231
Score = 105 bits (252), Expect = 8e-24
Identities = 50/68 (73%), Positives = 57/68 (83%)
Frame = +3
Query: 510 SKPHVQVQTSQGDKVFAPEEISAMVLTKMKETAEAYLGKKVTHAVVTVPAYFNDAPRQAT 689
++P V+V K F PEEISAM+L+KMK+TAEAYLGK VTHAVVTVPAYFNDA RQAT
Sbjct: 130 NRPLVEVNVGGKKKKFTPEEISAMILSKMKQTAEAYLGKPVTHAVVTVPAYFNDAQRQAT 189
Query: 690 KDAGTISG 713
KDAGTI+G
Sbjct: 190 KDAGTIAG 197
>SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 613
Score = 115 bits (277), Expect = 7e-27
Identities = 54/86 (62%), Positives = 64/86 (74%)
Frame = +1
Query: 247 GYHYSCVGVYKNGRVEIIANDQGNRITPSYVAFTQDGERLIGDAAKNQLTTNPENTVFDA 426
G YSCV V++ VEII NDQG R TPS+VAFT+ ERL+GDAAKNQ NP NTVFDA
Sbjct: 14 GTTYSCVAVWETANVEIIPNDQGARTTPSFVAFTET-ERLVGDAAKNQAAMNPRNTVFDA 72
Query: 427 KRLIGREWSDQTVQHDVKFFPFKVVE 504
KRLIGR + D Q D+K +PFKV++
Sbjct: 73 KRLIGRRYEDPETQKDIKHWPFKVID 98
Score = 79.0 bits (186), Expect = 8e-16
Identities = 39/66 (59%), Positives = 48/66 (72%)
Frame = +3
Query: 516 PHVQVQTSQGDKVFAPEEISAMVLTKMKETAEAYLGKKVTHAVVTVPAYFNDAPRQATKD 695
P ++V K F +EISAMVLTKMKE +EA L K+V AV+TVPAYF+D+ R ATKD
Sbjct: 103 PTIEVNYLGEKKQFTAQEISAMVLTKMKEISEAKLNKRVEKAVITVPAYFSDSQRAATKD 162
Query: 696 AGTISG 713
AG I+G
Sbjct: 163 AGAIAG 168
Score = 35.5 bits (78), Expect = 0.009
Identities = 16/17 (94%), Positives = 17/17 (100%)
Frame = +1
Query: 712 GLNVMRIINEPTAAAIA 762
GLNV+RIINEPTAAAIA
Sbjct: 168 GLNVLRIINEPTAAAIA 184
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 95.9 bits (228), Expect = 6e-21
Identities = 43/82 (52%), Positives = 57/82 (69%)
Frame = +1
Query: 259 SCVGVYKNGRVEIIANDQGNRITPSYVAFTQDGERLIGDAAKNQLTTNPENTVFDAKRLI 438
SC+ + + ++IAN +G R TPS VAFT+DGERL+G +AK Q NPENT F KRLI
Sbjct: 62 SCLAIMEGQTPKVIANAEGTRTTPSVVAFTKDGERLVGVSAKRQAVINPENTFFATKRLI 121
Query: 439 GREWSDQTVQHDVKFFPFKVVE 504
GR + + VQ D+K P+K+VE
Sbjct: 122 GRRFKEPEVQRDIKEVPYKIVE 143
Score = 77.4 bits (182), Expect = 2e-15
Identities = 39/73 (53%), Positives = 50/73 (68%), Gaps = 7/73 (9%)
Frame = +3
Query: 516 PHVQVQTSQGD-------KVFAPEEISAMVLTKMKETAEAYLGKKVTHAVVTVPAYFNDA 674
P+ V+ S GD K ++P +I +L+KM+ETA YLGK V +AVVTVPAYFND+
Sbjct: 138 PYKIVEHSNGDAWLEARGKTYSPSQIGGFILSKMRETASTYLGKDVKNAVVTVPAYFNDS 197
Query: 675 PRQATKDAGTISG 713
RQATK AG I+G
Sbjct: 198 QRQATKAAGAIAG 210
Score = 33.9 bits (74), Expect = 0.028
Identities = 13/17 (76%), Positives = 17/17 (100%)
Frame = +1
Query: 712 GLNVMRIINEPTAAAIA 762
GLNV+R++NEPTAAA+A
Sbjct: 210 GLNVLRVVNEPTAAALA 226
>SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein
Pss1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 55.6 bits (128), Expect = 8e-09
Identities = 30/88 (34%), Positives = 49/88 (55%), Gaps = 1/88 (1%)
Frame = +1
Query: 244 FGYHYSCVGVYKNGRVEIIANDQGNRITPSYVAFTQDGERLIGDAAKNQLTTNPENTVFD 423
FG + + V +N +++I N+ NR TPS V++ + R +G+AAK+ +N NTV
Sbjct: 12 FGNSKTVIAVARNRAIDVIVNEVSNRSTPSLVSYGERS-RFLGEAAKSAEASNFRNTVGS 70
Query: 424 AKRLIGREWSDQTVQH-DVKFFPFKVVE 504
KRL GR + D ++ + F K+ E
Sbjct: 71 LKRLAGRTYDDPEIKDIESNFISAKLTE 98
Score = 42.7 bits (96), Expect = 6e-05
Identities = 22/63 (34%), Positives = 36/63 (57%)
Frame = +3
Query: 525 QVQTSQGDKVFAPEEISAMVLTKMKETAEAYLGKKVTHAVVTVPAYFNDAPRQATKDAGT 704
+VQ + F+ ++ A TK+K AEA L V+ V+++PA+F D R+A +A
Sbjct: 106 KVQYLNEETAFSNIQLIAAYFTKIKAIAEAELIGSVSDVVISIPAWFTDIQRRALLEAAN 165
Query: 705 ISG 713
I+G
Sbjct: 166 IAG 168
>SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 566
Score = 51.6 bits (118), Expect = 1e-07
Identities = 24/76 (31%), Positives = 45/76 (59%)
Frame = +1
Query: 244 FGYHYSCVGVYKNGRVEIIANDQGNRITPSYVAFTQDGERLIGDAAKNQLTTNPENTVFD 423
FG S + ++G+ +++AN++GNR PS +++ D E G A+ QL N +N+V +
Sbjct: 31 FGNQNSSIAFNRDGKTDVLANEEGNRQIPSILSYHGDQE-YHGVQARGQLVRNADNSVTN 89
Query: 424 AKRLIGREWSDQTVQH 471
+ L+G+ + T+ H
Sbjct: 90 FRDLLGKSHDELTLHH 105
Score = 47.6 bits (108), Expect = 2e-06
Identities = 22/56 (39%), Positives = 33/56 (58%)
Frame = +3
Query: 546 DKVFAPEEISAMVLTKMKETAEAYLGKKVTHAVVTVPAYFNDAPRQATKDAGTISG 713
+K+ E S L ++ E+AE +LG KV V++VP YF DA R+A + A +G
Sbjct: 135 EKILTAHEASVRHLRRLTESAEDFLGTKVNGCVMSVPVYFTDAQRKALESAANEAG 190
>SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 848
Score = 35.1 bits (77), Expect = 0.012
Identities = 18/51 (35%), Positives = 27/51 (52%)
Frame = +3
Query: 555 FAPEEISAMVLTKMKETAEAYLGKKVTHAVVTVPAYFNDAPRQATKDAGTI 707
++ EEI AM + AE +K+T V+TVP +FN+ R +A I
Sbjct: 135 YSLEEIIAMTMEHYISLAEEMAHEKITDLVLTVPPHFNELQRSILLEAARI 185
>SPAC22H12.02 |tfg3|taf14|transcription factor TFIIF complex subunit
Tfg3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 241
Score = 28.7 bits (61), Expect = 1.1
Identities = 16/39 (41%), Positives = 26/39 (66%), Gaps = 2/39 (5%)
Frame = -1
Query: 567 LQEQILCRLVKFVLEHEVCCLF--NDLEGEELNIMLYSL 457
LQE L ++V+ V E++ ++ ND+EG E +I LY+L
Sbjct: 185 LQEDDLLQVVQMVNENKTPDMYVRNDIEGGEFHIDLYTL 223
>SPBC336.12c |cdc10||MBF transcription factor complex subunit
Cdc10|Schizosaccharomyces pombe|chr 2|||Manual
Length = 767
Score = 25.8 bits (54), Expect = 7.5
Identities = 15/39 (38%), Positives = 17/39 (43%)
Frame = +2
Query: 446 NGVTKLYNMMLSSSPSRSLKRQQTSCSSTNFTRRQSICS 562
NGV + NM S SPS S T S N R + S
Sbjct: 212 NGVHTINNMQSSPSPSSSFLLPLTQIDSQNVKRSNNYLS 250
>SPBC27.03 |meu25||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 622
Score = 25.4 bits (53), Expect = 9.9
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +1
Query: 355 GERLIGDAAKNQLTTNPENT 414
GE ++ D+ N TNP+NT
Sbjct: 6 GENIVSDSIVNMELTNPDNT 25
>SPAC16C9.06c |upf1||ATP-dependent RNA helicase
Upf1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 925
Score = 25.4 bits (53), Expect = 9.9
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = -2
Query: 347 VKATYEGVMRFPWS 306
+K TYEG +R PWS
Sbjct: 284 MKLTYEGELRAPWS 297
>SPBC947.05c |||ferric-chelate reductase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 564
Score = 25.4 bits (53), Expect = 9.9
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = -2
Query: 494 LKGKNLTSCCTVWSLHSRPIRRLASKTVFS 405
LK N+TS +WS S + ++ASK++ S
Sbjct: 438 LKECNVTSITFIWSCRSLSLLKVASKSLNS 467
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,411,976
Number of Sequences: 5004
Number of extensions: 68751
Number of successful extensions: 217
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 196
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 213
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 406444570
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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