Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40089
         (828 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY137766-1|AAM94344.1|   78|Anopheles gambiae heat shock protein...    47   6e-07
Y17717-1|CAA76832.1|  101|Anopheles gambiae cE5 protein protein.       23   8.7  
AJ000038-1|CAA03874.1|   73|Anopheles gambiae F1 protein protein.      23   8.7  

>AY137766-1|AAM94344.1|   78|Anopheles gambiae heat shock protein 70
           protein.
          Length = 78

 Score = 47.2 bits (107), Expect = 6e-07
 Identities = 20/25 (80%), Positives = 23/25 (92%)
 Frame = +3

Query: 639 AVVTVPAYFNDAPRQATKDAGTISG 713
           AV+TVPAYFND+ RQATKDAG I+G
Sbjct: 2   AVITVPAYFNDSQRQATKDAGAIAG 26



 Score = 35.9 bits (79), Expect = 0.002
 Identities = 16/17 (94%), Positives = 17/17 (100%)
 Frame = +1

Query: 712 GLNVMRIINEPTAAAIA 762
           GLNVMRIINEPTAAA+A
Sbjct: 26  GLNVMRIINEPTAAALA 42


>Y17717-1|CAA76832.1|  101|Anopheles gambiae cE5 protein protein.
          Length = 101

 Score = 23.4 bits (48), Expect = 8.7
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = -1

Query: 810 SKDWEPFFSPSFLSSHGDSCSSR 742
           S D E  F PS L  H D+ ++R
Sbjct: 51  SDDGEEEFDPSLLEEHADAPTAR 73


>AJ000038-1|CAA03874.1|   73|Anopheles gambiae F1 protein protein.
          Length = 73

 Score = 23.4 bits (48), Expect = 8.7
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = -1

Query: 810 SKDWEPFFSPSFLSSHGDSCSSR 742
           S D E  F PS L  H D+ ++R
Sbjct: 51  SDDGEEEFDPSLLEEHADAPTAR 73


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 861,525
Number of Sequences: 2352
Number of extensions: 16823
Number of successful extensions: 20
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 88150236
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)