Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40081
(717 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_48046| Best HMM Match : DEAD (HMM E-Value=4e-38) 115 3e-26
SB_28853| Best HMM Match : No HMM Matches (HMM E-Value=.) 115 3e-26
SB_37351| Best HMM Match : DEAD (HMM E-Value=0) 50 2e-06
SB_18655| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 2e-06
SB_32980| Best HMM Match : DEAD (HMM E-Value=0) 50 2e-06
SB_17563| Best HMM Match : DEAD (HMM E-Value=0) 50 2e-06
SB_2247| Best HMM Match : DEAD (HMM E-Value=0) 50 2e-06
SB_44408| Best HMM Match : DEAD (HMM E-Value=6.8005e-42) 49 4e-06
SB_9558| Best HMM Match : DEAD (HMM E-Value=0) 46 2e-05
SB_52411| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 9e-05
SB_19958| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 2e-04
SB_56998| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 2e-04
SB_45527| Best HMM Match : DEAD (HMM E-Value=0.0069) 39 0.004
SB_37968| Best HMM Match : DEAD (HMM E-Value=3.6) 36 0.025
SB_18993| Best HMM Match : DEAD (HMM E-Value=9.3e-41) 35 0.076
SB_57459| Best HMM Match : DEAD (HMM E-Value=1.50001e-40) 31 1.2
SB_14524| Best HMM Match : DEAD (HMM E-Value=3.7e-17) 30 1.6
SB_1442| Best HMM Match : SRCR (HMM E-Value=0) 30 1.6
SB_45898| Best HMM Match : DEAD (HMM E-Value=1.3e-36) 30 2.2
SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.8
SB_3229| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.0
SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.7
SB_48450| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.7
>SB_48046| Best HMM Match : DEAD (HMM E-Value=4e-38)
Length = 475
Score = 115 bits (277), Expect = 3e-26
Identities = 54/83 (65%), Positives = 62/83 (74%)
Frame = +2
Query: 5 VYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACPHIVVGTP 184
V VLVMCHTRELAFQI KEYERF KYMS ++++VFFGG+ I+KD++ LKT CPHIVVGTP
Sbjct: 116 VSVLVMCHTRELAFQIHKEYERFCKYMSNIKIAVFFGGINIKKDQQTLKTNCPHIVVGTP 175
Query: 185 GRILAXXXXXXXXXXXXXXFILD 253
GRILA FILD
Sbjct: 176 GRILALTREKTLNLKHAKHFILD 198
Score = 56.0 bits (129), Expect = 3e-08
Identities = 41/103 (39%), Positives = 48/103 (46%), Gaps = 1/103 (0%)
Frame = +1
Query: 379 CKXFMQDPMEVYVDDEAKLKLHGLQQHYVXXXXXXXXXXXXXXXIYWSSIMWAIFVKSVQ 558
CK ++ PMEVYVDDE KL LHGLQQ+YV IFVKSVQ
Sbjct: 288 CKGPLK-PMEVYVDDETKLTLHGLQQYYVKLKDNEKNRKLFDLLDLLEFNQVIIFVKSVQ 346
Query: 559 RCIASWHNCSPTXTSLPLVSTEI-WTLV*RLSRCQQFKGLPKK 684
RC A H + P + RL+R QQFK K+
Sbjct: 347 RCTALSHLL--LKQNFPAICIHRGMKQEERLARYQQFKNFEKR 387
>SB_28853| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 208
Score = 115 bits (277), Expect = 3e-26
Identities = 54/83 (65%), Positives = 62/83 (74%)
Frame = +2
Query: 5 VYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACPHIVVGTP 184
V VLVMCHTRELAFQI KEYERF KYMS ++++VFFGG+ I+KD++ LKT CPHIVVGTP
Sbjct: 116 VSVLVMCHTRELAFQIHKEYERFCKYMSNIKIAVFFGGINIKKDQQTLKTNCPHIVVGTP 175
Query: 185 GRILAXXXXXXXXXXXXXXFILD 253
GRILA FILD
Sbjct: 176 GRILALTREKTLNLKHAKHFILD 198
>SB_37351| Best HMM Match : DEAD (HMM E-Value=0)
Length = 688
Score = 50.0 bits (114), Expect = 2e-06
Identities = 27/62 (43%), Positives = 36/62 (58%)
Frame = +2
Query: 11 VLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACPHIVVGTPGR 190
VLVM TRELA Q+ E+E S + V +GGMP + E + + ++VGTPGR
Sbjct: 150 VLVMAPTRELAKQVGNEFENLK---SNLEVYCIYGGMPYEPQENAINSGL-DVLVGTPGR 205
Query: 191 IL 196
IL
Sbjct: 206 IL 207
>SB_18655| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 697
Score = 50.0 bits (114), Expect = 2e-06
Identities = 27/60 (45%), Positives = 36/60 (60%)
Frame = +2
Query: 14 LVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACPHIVVGTPGRI 193
L+M TRELA Q+ + +KY S V+V+ GGM K + +LK P IVV TPGR+
Sbjct: 222 LIMAPTRELALQVKDHLVKAAKYTS-VKVAAIVGGMAAPKQQRLLKQR-PEIVVATPGRL 279
>SB_32980| Best HMM Match : DEAD (HMM E-Value=0)
Length = 985
Score = 49.6 bits (113), Expect = 2e-06
Identities = 25/83 (30%), Positives = 42/83 (50%)
Frame = +2
Query: 5 VYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACPHIVVGTP 184
+ ++++ TRE+A Q+ + G+ VF GG+ +++D++ LK+ HI VGTP
Sbjct: 82 IQIIILTPTREIAVQVKDVICAIGCHYDGLACKVFIGGISLEEDKKALKSC--HIAVGTP 139
Query: 185 GRILAXXXXXXXXXXXXXXFILD 253
GR+ FILD
Sbjct: 140 GRVKYLIEQKYLKTESVRMFILD 162
>SB_17563| Best HMM Match : DEAD (HMM E-Value=0)
Length = 439
Score = 49.6 bits (113), Expect = 2e-06
Identities = 23/68 (33%), Positives = 44/68 (64%)
Frame = +1
Query: 259 DKMLESLDMRRDVQEIFRNTPHGKQVMMFSATLSKEIRPVCKXFMQDPMEVYVDDEAKLK 438
DK+L S+D ++ +++I ++ P +Q+++FSAT +R + ++ P E+ + DE L
Sbjct: 206 DKLL-SMDFKKMLEQIIKHLPENRQILLFSATFPISVRDFKEKHLRKPYEINLMDE--LT 262
Query: 439 LHGLQQHY 462
LHG+ Q+Y
Sbjct: 263 LHGVTQYY 270
Score = 39.5 bits (88), Expect = 0.003
Identities = 24/70 (34%), Positives = 37/70 (52%), Gaps = 6/70 (8%)
Frame = +2
Query: 5 VYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKD------EEVLKTACPH 166
+ LV+ TRELA Q S+ K+M G +V V GG ++ D +++ H
Sbjct: 116 IQALVLVPTRELALQTSQICIELGKHM-GAQVMVTTGGTSLKDDILRLYNKDIFVHVVVH 174
Query: 167 IVVGTPGRIL 196
++V TPGR+L
Sbjct: 175 VIVATPGRVL 184
>SB_2247| Best HMM Match : DEAD (HMM E-Value=0)
Length = 439
Score = 49.6 bits (113), Expect = 2e-06
Identities = 23/68 (33%), Positives = 44/68 (64%)
Frame = +1
Query: 259 DKMLESLDMRRDVQEIFRNTPHGKQVMMFSATLSKEIRPVCKXFMQDPMEVYVDDEAKLK 438
DK+L S+D ++ +++I ++ P +Q+++FSAT +R + ++ P E+ + DE L
Sbjct: 206 DKLL-SMDFKKMLEQIIKHLPENRQILLFSATFPISVRDFKEKHLRKPYEINLMDE--LT 262
Query: 439 LHGLQQHY 462
LHG+ Q+Y
Sbjct: 263 LHGVTQYY 270
Score = 39.5 bits (88), Expect = 0.003
Identities = 24/70 (34%), Positives = 37/70 (52%), Gaps = 6/70 (8%)
Frame = +2
Query: 5 VYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKD------EEVLKTACPH 166
+ LV+ TRELA Q S+ K+M G +V V GG ++ D +++ H
Sbjct: 116 IQALVLVPTRELALQTSQICIELGKHM-GAQVMVTTGGTSLKDDILRLYNKDIFVHVVVH 174
Query: 167 IVVGTPGRIL 196
++V TPGR+L
Sbjct: 175 VIVATPGRVL 184
>SB_44408| Best HMM Match : DEAD (HMM E-Value=6.8005e-42)
Length = 238
Score = 48.8 bits (111), Expect = 4e-06
Identities = 23/64 (35%), Positives = 41/64 (64%)
Frame = +2
Query: 5 VYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACPHIVVGTP 184
++ L++ TRELAFQIS++ E + GV+ +V GG+ + + ++ PHI++ TP
Sbjct: 33 LFALILTPTRELAFQISEQCEALGSGI-GVKCAVIVGGIDMM-SQALMLAKKPHIIIATP 90
Query: 185 GRIL 196
GR++
Sbjct: 91 GRLI 94
>SB_9558| Best HMM Match : DEAD (HMM E-Value=0)
Length = 436
Score = 46.4 bits (105), Expect = 2e-05
Identities = 22/63 (34%), Positives = 40/63 (63%)
Frame = +2
Query: 5 VYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACPHIVVGTP 184
++ +V+ TRELAFQI+ +++ + + G++ +V GG+ + K L PH+V+ TP
Sbjct: 76 IFAVVLTPTRELAFQIADQFKVLGRPI-GLKEAVIVGGLDMMKQALSLANK-PHVVIATP 133
Query: 185 GRI 193
GR+
Sbjct: 134 GRL 136
>SB_52411| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 370
Score = 44.4 bits (100), Expect = 9e-05
Identities = 23/69 (33%), Positives = 39/69 (56%)
Frame = +1
Query: 259 DKMLESLDMRRDVQEIFRNTPHGKQVMMFSATLSKEIRPVCKXFMQDPMEVYVDDEAKLK 438
D+ML + + +++R P QV++ SATL EI + FM DP+ + V + +L
Sbjct: 149 DEMLNK-GFKEQIYDVYRYLPPATQVVLLSATLPHEILEMTSKFMTDPIRILVKRD-ELT 206
Query: 439 LHGLQQHYV 465
L G++Q +V
Sbjct: 207 LEGIKQFFV 215
Score = 39.1 bits (87), Expect = 0.004
Identities = 27/60 (45%), Positives = 31/60 (51%)
Frame = +2
Query: 14 LVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACPHIVVGTPGRI 193
LV+ TRELA QI K YMS V+ GG I +D L HIV GTPGR+
Sbjct: 69 LVLSPTRELANQIQKVVLALGDYMS-VQCHACIGGTNIGEDIRKLDYG-QHIVSGTPGRV 126
>SB_19958| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 797
Score = 43.6 bits (98), Expect = 2e-04
Identities = 24/60 (40%), Positives = 36/60 (60%)
Frame = +2
Query: 14 LVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACPHIVVGTPGRI 193
L + TRELA QI E +FS + + ++V V +GG+ + L+ C H +VGTPGR+
Sbjct: 556 LCVAPTRELAKQIYIEARKFSDH-TPIKVCVCYGGVSVPYQASQLERGC-HFLVGTPGRL 613
>SB_56998| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 478
Score = 43.6 bits (98), Expect = 2e-04
Identities = 28/80 (35%), Positives = 37/80 (46%)
Frame = +2
Query: 14 LVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACPHIVVGTPGRI 193
LV+ TRELA QI K YM V+ GG +++D L+ H+VVGTPGR+
Sbjct: 163 LVLAPTRELAQQIQKVVLALGDYMH-VKCHACIGGTNVREDRMKLEEGV-HVVVGTPGRV 220
Query: 194 LAXXXXXXXXXXXXXXFILD 253
F+LD
Sbjct: 221 FDMINRGVLNTRDIKLFVLD 240
Score = 39.5 bits (88), Expect = 0.003
Identities = 21/69 (30%), Positives = 39/69 (56%)
Frame = +1
Query: 259 DKMLESLDMRRDVQEIFRNTPHGKQVMMFSATLSKEIRPVCKXFMQDPMEVYVDDEAKLK 438
D+ML S + + ++F P QV++ SAT+ ++ V FM+D + + V E ++
Sbjct: 243 DEML-SRGFKDQIYDVFTRLPTSVQVVLLSATMPTDVLEVTNKFMRDVVRILVKRE-EVT 300
Query: 439 LHGLQQHYV 465
L G++Q +V
Sbjct: 301 LEGIKQFFV 309
>SB_45527| Best HMM Match : DEAD (HMM E-Value=0.0069)
Length = 120
Score = 39.1 bits (87), Expect = 0.004
Identities = 27/60 (45%), Positives = 31/60 (51%)
Frame = +2
Query: 14 LVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACPHIVVGTPGRI 193
LV+ TRELA QI K YMS V+ GG I +D L HIV GTPGR+
Sbjct: 7 LVLSPTRELANQIQKVVLALGDYMS-VQCHACIGGTNIGEDIRKLDYG-QHIVSGTPGRV 64
>SB_37968| Best HMM Match : DEAD (HMM E-Value=3.6)
Length = 127
Score = 36.3 bits (80), Expect = 0.025
Identities = 15/53 (28%), Positives = 32/53 (60%)
Frame = +1
Query: 259 DKMLESLDMRRDVQEIFRNTPHGKQVMMFSATLSKEIRPVCKXFMQDPMEVYV 417
D+ML+ + D++ + P +Q ++FSAT S +I+ + + + +P+E+ V
Sbjct: 13 DRMLD-MGFIHDIRRVLTKLPAKRQNLLFSATFSDDIKALAEKLLHNPLEIEV 64
>SB_18993| Best HMM Match : DEAD (HMM E-Value=9.3e-41)
Length = 690
Score = 34.7 bits (76), Expect = 0.076
Identities = 21/62 (33%), Positives = 32/62 (51%)
Frame = +2
Query: 11 VLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACPHIVVGTPGR 190
VLV+C TRELA Q+ + K+ +R + +GG P L+ I + TPGR
Sbjct: 135 VLVLCPTRELAQQVQEVAYSVGKHCK-LRSTCIYGGAPKGPQIRELERGV-EICIATPGR 192
Query: 191 IL 196
++
Sbjct: 193 LI 194
Score = 27.9 bits (59), Expect = 8.7
Identities = 14/53 (26%), Positives = 28/53 (52%)
Frame = +1
Query: 259 DKMLESLDMRRDVQEIFRNTPHGKQVMMFSATLSKEIRPVCKXFMQDPMEVYV 417
D+ML+ + ++ I +Q +M+SAT KE++ + F+ D + + V
Sbjct: 216 DRMLD-MGFEPQIRTIIDQIRPDRQTLMWSATWPKEVQGLAHDFLSDYVHITV 267
>SB_57459| Best HMM Match : DEAD (HMM E-Value=1.50001e-40)
Length = 490
Score = 30.7 bits (66), Expect = 1.2
Identities = 17/62 (27%), Positives = 30/62 (48%)
Frame = +2
Query: 11 VLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACPHIVVGTPGR 190
V+ + T ELA Q K E K+ ++++ G + ++ HI++GTPG
Sbjct: 176 VICLSPTYELARQTGKVAEAMGKHCPHIKINYAVRGNQFPRGQK----CTDHIIIGTPGT 231
Query: 191 IL 196
+L
Sbjct: 232 LL 233
>SB_14524| Best HMM Match : DEAD (HMM E-Value=3.7e-17)
Length = 500
Score = 30.3 bits (65), Expect = 1.6
Identities = 15/49 (30%), Positives = 25/49 (51%)
Frame = +1
Query: 259 DKMLESLDMRRDVQEIFRNTPHGKQVMMFSATLSKEIRPVCKXFMQDPM 405
D ML+ L + VQ+I + +Q M+FSAT+ I + + P+
Sbjct: 289 DTMLQ-LGFEQQVQQILERLSNRRQTMLFSATIPPSIEAMASRLLNAPV 336
>SB_1442| Best HMM Match : SRCR (HMM E-Value=0)
Length = 2103
Score = 30.3 bits (65), Expect = 1.6
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = -3
Query: 658 DSGRDAKQGSKSRWIPMAGKXWSVSSCAKKLYSAV 554
DSG SK RW+ M WS + CA Y+ V
Sbjct: 1973 DSGGPLVCESKGRWVLMGVTSWSYNGCADSGYAGV 2007
>SB_45898| Best HMM Match : DEAD (HMM E-Value=1.3e-36)
Length = 428
Score = 29.9 bits (64), Expect = 2.2
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +2
Query: 8 YVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGG 118
Y L++ TRELA QI +E +F + + G+R GG
Sbjct: 180 YALILAPTRELAQQIEEEILKFGRPL-GIRTVSVIGG 215
>SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 790
Score = 29.1 bits (62), Expect = 3.8
Identities = 9/29 (31%), Positives = 19/29 (65%)
Frame = +1
Query: 337 MMFSATLSKEIRPVCKXFMQDPMEVYVDD 423
++FSAT K++ +C+ + DP+ V + +
Sbjct: 683 LLFSATFKKKVEHLCRDILVDPVRVVIGE 711
>SB_3229| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 45
Score = 28.7 bits (61), Expect = 5.0
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +2
Query: 92 VRVSVFFGGMPIQKDEEVLKTACPHIVVGTPGRI 193
V+ GG +++D L+ H+VVGTPGR+
Sbjct: 3 VKCHACIGGTNVREDRMKLEEGV-HVVVGTPGRV 35
>SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1375
Score = 27.9 bits (59), Expect = 8.7
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = +2
Query: 80 YMSGVRVSVFFGGMPIQKDEEVLKTACPHIVVGTPGRIL 196
Y S R V +GG I L C H++V TPGR++
Sbjct: 950 YRSLCRPCVVYGGADIGSQLRELDRNC-HLLVATPGRLV 987
>SB_48450| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 457
Score = 27.9 bits (59), Expect = 8.7
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 3/36 (8%)
Frame = -1
Query: 123 GIPP-KNTDTLTPDIYFEKRS--YSLLIWKANSLVW 25
GIP N TP I+ + +S Y +LIW A L+W
Sbjct: 109 GIPSLSNPKCYTPQIFEDVKSVWYWILIWIAGPLIW 144
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,288,158
Number of Sequences: 59808
Number of extensions: 404226
Number of successful extensions: 896
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 780
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 884
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1901817086
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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