Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40081
(717 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical pr... 127 7e-30
U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA he... 114 5e-26
Z54327-7|CAD57690.1| 268|Caenorhabditis elegans Hypothetical pr... 113 1e-25
Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein ( C.ele... 51 1e-06
U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical p... 51 1e-06
U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation fact... 51 1e-06
AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and bel... 51 1e-06
AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and bel... 51 1e-06
AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and bel... 51 1e-06
AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical ... 48 9e-06
AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical ... 48 9e-06
AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical... 46 2e-05
AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical ... 46 2e-05
Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical pr... 45 5e-05
EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein. 45 5e-05
CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical ... 45 5e-05
AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical... 44 8e-05
AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical... 43 2e-04
AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical ... 42 4e-04
U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical pr... 42 6e-04
AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical ... 42 6e-04
AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved ger... 40 0.002
U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical pr... 39 0.003
U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical pr... 39 0.003
AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical ... 39 0.003
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 39 0.004
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 39 0.004
AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical ... 36 0.029
AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical ... 36 0.029
AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical ... 36 0.038
Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical pr... 34 0.088
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 33 0.20
AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical ... 30 1.4
>Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical
protein C26D10.2a protein.
Length = 425
Score = 127 bits (307), Expect = 7e-30
Identities = 75/144 (52%), Positives = 84/144 (58%), Gaps = 1/144 (0%)
Frame = +1
Query: 256 CDKMLESLDMRRDVQEIFRNTPHGKQVMMFSATLSKEIRPVCKXFMQDPMEVYVDDEAKL 435
CDKM+ DMRRDVQEI + TP KQVMMFSATL KE+R VCK FMQDPMEVYVDDEAKL
Sbjct: 194 CDKMIGDADMRRDVQEIVKMTPQQKQVMMFSATLPKELRTVCKRFMQDPMEVYVDDEAKL 253
Query: 436 KLHGLQQHYVXXXXXXXXXXXXXXXIYWSSIMWAIFVKSVQRCIASWHNCSPTXTSLPLV 615
LHGLQQHYV IFVK+V+RC A H T + P +
Sbjct: 254 TLHGLQQHYVKLKEAEKNRRLLNLLDALEFNQVVIFVKAVKRCEA-LHQLL-TEQNFPSI 311
Query: 616 ST-EIWTLV*RLSRCQQFKGLPKK 684
+ RLSR Q FK K+
Sbjct: 312 AIHRQMAQEERLSRYQAFKDFQKR 335
Score = 113 bits (272), Expect = 1e-25
Identities = 54/83 (65%), Positives = 61/83 (73%)
Frame = +2
Query: 5 VYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACPHIVVGTP 184
V V+ MCHTRELAFQISKEYERFSKY+ GV+V+VFFGGM I+KDEE L CPHIVVGTP
Sbjct: 110 VSVVCMCHTRELAFQISKEYERFSKYLPGVKVAVFFGGMAIKKDEERLANDCPHIVVGTP 169
Query: 185 GRILAXXXXXXXXXXXXXXFILD 253
GR+LA F+LD
Sbjct: 170 GRMLALARSGKLKLDKVKYFVLD 192
>U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA
helicase protein.
Length = 417
Score = 114 bits (275), Expect = 5e-26
Identities = 73/144 (50%), Positives = 81/144 (56%), Gaps = 1/144 (0%)
Frame = +1
Query: 256 CDKMLESLDMRRDVQEIFRNTPHGKQVMMFSATLSKEIRPVCKXFMQDPMEVYVDDEAKL 435
CDKM+ DMRRDVQEI KQVMMFSATL KE+R VCK FMQDPMEVYVDDEAKL
Sbjct: 193 CDKMIGDADMRRDVQEI-------KQVMMFSATLPKELRTVCKRFMQDPMEVYVDDEAKL 245
Query: 436 KLHGLQQHYVXXXXXXXXXXXXXXXIYWSSIMWAIFVKSVQRCIASWHNCSPTXTSLPLV 615
LHGLQQHYV IFVK+V+RC A H T + P +
Sbjct: 246 TLHGLQQHYVKLKEAEKNRRLLNLLDALEFNQVVIFVKAVKRCEA-LHQLL-TEQNFPSI 303
Query: 616 ST-EIWTLV*RLSRCQQFKGLPKK 684
+ RLSR Q FK K+
Sbjct: 304 AIHRQMAQEERLSRYQAFKDFQKR 327
Score = 113 bits (272), Expect = 1e-25
Identities = 54/83 (65%), Positives = 61/83 (73%)
Frame = +2
Query: 5 VYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACPHIVVGTP 184
V V+ MCHTRELAFQISKEYERFSKY+ GV+V+VFFGGM I+KDEE L CPHIVVGTP
Sbjct: 109 VSVVCMCHTRELAFQISKEYERFSKYLPGVKVAVFFGGMAIKKDEERLANDCPHIVVGTP 168
Query: 185 GRILAXXXXXXXXXXXXXXFILD 253
GR+LA F+LD
Sbjct: 169 GRMLALARSGKLKLDKVKYFVLD 191
>Z54327-7|CAD57690.1| 268|Caenorhabditis elegans Hypothetical
protein C26D10.2b protein.
Length = 268
Score = 113 bits (272), Expect = 1e-25
Identities = 54/83 (65%), Positives = 61/83 (73%)
Frame = +2
Query: 5 VYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACPHIVVGTP 184
V V+ MCHTRELAFQISKEYERFSKY+ GV+V+VFFGGM I+KDEE L CPHIVVGTP
Sbjct: 110 VSVVCMCHTRELAFQISKEYERFSKYLPGVKVAVFFGGMAIKKDEERLANDCPHIVVGTP 169
Query: 185 GRILAXXXXXXXXXXXXXXFILD 253
GR+LA F+LD
Sbjct: 170 GRMLALARSGKLKLDKVKYFVLD 192
Score = 76.2 bits (179), Expect = 2e-14
Identities = 35/48 (72%), Positives = 38/48 (79%)
Frame = +1
Query: 256 CDKMLESLDMRRDVQEIFRNTPHGKQVMMFSATLSKEIRPVCKXFMQD 399
CDKM+ DMRRDVQEI + TP KQVMMFSATL KE+R VCK FMQD
Sbjct: 194 CDKMIGDADMRRDVQEIVKMTPQQKQVMMFSATLPKELRTVCKRFMQD 241
>Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein (
C.elegans mRNA for eIF-4A homologue. ).
Length = 402
Score = 50.8 bits (116), Expect = 1e-06
Identities = 27/64 (42%), Positives = 37/64 (57%)
Frame = +2
Query: 2 HVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACPHIVVGT 181
HV LVM TRELA QI K +Y++ V + GG ++ D+ L+ H+VVGT
Sbjct: 97 HVQALVMAPTRELAQQIQKVMSALGEYLN-VNILPCIGGTSVRDDQRKLEAGI-HVVVGT 154
Query: 182 PGRI 193
PGR+
Sbjct: 155 PGRV 158
Score = 48.8 bits (111), Expect = 4e-06
Identities = 24/69 (34%), Positives = 42/69 (60%)
Frame = +1
Query: 259 DKMLESLDMRRDVQEIFRNTPHGKQVMMFSATLSKEIRPVCKXFMQDPMEVYVDDEAKLK 438
D+ML S + + E+FR+ P QV++ SAT+ E+ V FM++P+ + V + +L
Sbjct: 181 DEML-SRGFKDQIYEVFRSMPQDVQVVLLSATMPSEVLDVTNRFMRNPIRILVKKD-ELT 238
Query: 439 LHGLQQHYV 465
L G++Q Y+
Sbjct: 239 LEGIRQFYI 247
>U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical
protein F57B9.3 protein.
Length = 363
Score = 50.8 bits (116), Expect = 1e-06
Identities = 25/69 (36%), Positives = 42/69 (60%)
Frame = +1
Query: 259 DKMLESLDMRRDVQEIFRNTPHGKQVMMFSATLSKEIRPVCKXFMQDPMEVYVDDEAKLK 438
D+ML S + + E+FR+ P QV++ SAT+ E+ V FM+DP+ + V + +L
Sbjct: 140 DEML-SKGFKDQIYEVFRSMPQDVQVVLLSATMPSEVLDVTNRFMRDPIRILVKKD-ELT 197
Query: 439 LHGLQQHYV 465
L G++Q Y+
Sbjct: 198 LEGIRQFYI 206
>U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation factor
protein 1, isoforma protein.
Length = 402
Score = 50.8 bits (116), Expect = 1e-06
Identities = 27/64 (42%), Positives = 37/64 (57%)
Frame = +2
Query: 2 HVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACPHIVVGT 181
HV LVM TRELA QI K +Y++ V + GG ++ D+ L+ H+VVGT
Sbjct: 97 HVQALVMAPTRELAQQIQKVMSALGEYLN-VNILPCIGGTSVRDDQRKLEAGI-HVVVGT 154
Query: 182 PGRI 193
PGR+
Sbjct: 155 PGRV 158
Score = 48.8 bits (111), Expect = 4e-06
Identities = 24/69 (34%), Positives = 42/69 (60%)
Frame = +1
Query: 259 DKMLESLDMRRDVQEIFRNTPHGKQVMMFSATLSKEIRPVCKXFMQDPMEVYVDDEAKLK 438
D+ML S + + E+FR+ P QV++ SAT+ E+ V FM++P+ + V + +L
Sbjct: 181 DEML-SRGFKDQIYEVFRSMPQDVQVVLLSATMPSEVLDVTNRFMRNPIRILVKKD-ELT 238
Query: 439 LHGLQQHYV 465
L G++Q Y+
Sbjct: 239 LEGIRQFYI 247
>AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform c protein.
Length = 660
Score = 50.8 bits (116), Expect = 1e-06
Identities = 25/61 (40%), Positives = 38/61 (62%)
Frame = +2
Query: 14 LVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACPHIVVGTPGRI 193
LV+ TRELA QI KE +FS Y S ++ ++ +GG +D+ A HI++ TPGR+
Sbjct: 226 LVLSPTRELAIQIHKEATKFS-YKSNIQTAILYGGRENYRDQVNRLRAGTHILIATPGRL 284
Query: 194 L 196
+
Sbjct: 285 I 285
>AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform b protein.
Length = 644
Score = 50.8 bits (116), Expect = 1e-06
Identities = 25/61 (40%), Positives = 38/61 (62%)
Frame = +2
Query: 14 LVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACPHIVVGTPGRI 193
LV+ TRELA QI KE +FS Y S ++ ++ +GG +D+ A HI++ TPGR+
Sbjct: 210 LVLSPTRELAIQIHKEATKFS-YKSNIQTAILYGGRENYRDQVNRLRAGTHILIATPGRL 268
Query: 194 L 196
+
Sbjct: 269 I 269
>AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform a protein.
Length = 641
Score = 50.8 bits (116), Expect = 1e-06
Identities = 25/61 (40%), Positives = 38/61 (62%)
Frame = +2
Query: 14 LVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACPHIVVGTPGRI 193
LV+ TRELA QI KE +FS Y S ++ ++ +GG +D+ A HI++ TPGR+
Sbjct: 207 LVLSPTRELAIQIHKEATKFS-YKSNIQTAILYGGRENYRDQVNRLRAGTHILIATPGRL 265
Query: 194 L 196
+
Sbjct: 266 I 266
>AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical
protein H20J04.4a protein.
Length = 488
Score = 47.6 bits (108), Expect = 9e-06
Identities = 24/63 (38%), Positives = 38/63 (60%)
Frame = +2
Query: 5 VYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACPHIVVGTP 184
+Y L++ TRELAFQI++++ K ++ ++ SV GG + L PH+VV TP
Sbjct: 158 IYALILTPTRELAFQIAEQFTALGKPIT-LKCSVIVGGRSLIHQARELSER-PHVVVATP 215
Query: 185 GRI 193
GR+
Sbjct: 216 GRL 218
>AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical
protein H20J04.4b protein.
Length = 561
Score = 47.6 bits (108), Expect = 9e-06
Identities = 24/63 (38%), Positives = 38/63 (60%)
Frame = +2
Query: 5 VYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACPHIVVGTP 184
+Y L++ TRELAFQI++++ K ++ ++ SV GG + L PH+VV TP
Sbjct: 158 IYALILTPTRELAFQIAEQFTALGKPIT-LKCSVIVGGRSLIHQARELSER-PHVVVATP 215
Query: 185 GRI 193
GR+
Sbjct: 216 GRL 218
>AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical
protein F33D11.10 protein.
Length = 399
Score = 46.4 bits (105), Expect = 2e-05
Identities = 25/69 (36%), Positives = 40/69 (57%)
Frame = +1
Query: 259 DKMLESLDMRRDVQEIFRNTPHGKQVMMFSATLSKEIRPVCKXFMQDPMEVYVDDEAKLK 438
D+ML + + +I+R P G QV++ SATL EI + FM DP+ + V + +L
Sbjct: 178 DEMLNK-GFKEQLYDIYRYLPPGAQVVLLSATLPHEILEMTSKFMTDPIRILVKRD-ELT 235
Query: 439 LHGLQQHYV 465
L G++Q +V
Sbjct: 236 LEGIKQFFV 244
Score = 37.1 bits (82), Expect = 0.013
Identities = 23/60 (38%), Positives = 31/60 (51%)
Frame = +2
Query: 14 LVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACPHIVVGTPGRI 193
L++ TRELA QI K YM+ V+ GG + +D L H+V GTPGR+
Sbjct: 98 LILSPTRELAVQIQKVVLALGDYMN-VQCHACIGGTNLGEDIRKLDYG-QHVVSGTPGRV 155
>AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical
protein Y65B4A.6 protein.
Length = 399
Score = 46.4 bits (105), Expect = 2e-05
Identities = 25/69 (36%), Positives = 40/69 (57%)
Frame = +1
Query: 259 DKMLESLDMRRDVQEIFRNTPHGKQVMMFSATLSKEIRPVCKXFMQDPMEVYVDDEAKLK 438
D+ML + + +I+R P G QV++ SATL EI + FM DP+ + V + +L
Sbjct: 178 DEMLNK-GFKEQLYDIYRYLPPGAQVVLLSATLPHEILEMTSKFMTDPIRILVKRD-ELT 235
Query: 439 LHGLQQHYV 465
L G++Q +V
Sbjct: 236 LEGIKQFFV 244
Score = 37.1 bits (82), Expect = 0.013
Identities = 23/60 (38%), Positives = 31/60 (51%)
Frame = +2
Query: 14 LVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACPHIVVGTPGRI 193
L++ TRELA QI K YM+ V+ GG + +D L H+V GTPGR+
Sbjct: 98 LILSPTRELAVQIQKVVLALGDYMN-VQCHACIGGTNLGEDIRKLDYG-QHVVSGTPGRV 155
>Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical
protein T26G10.1 protein.
Length = 489
Score = 45.2 bits (102), Expect = 5e-05
Identities = 24/63 (38%), Positives = 37/63 (58%)
Frame = +2
Query: 8 YVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACPHIVVGTPG 187
+ LV+ TRELAFQI +++E + G+ +V GG+ + L PHI+V TPG
Sbjct: 114 FCLVLTPTRELAFQIGQQFEALGSGI-GLIAAVIVGGVDMAAQAMALARR-PHIIVATPG 171
Query: 188 RIL 196
R++
Sbjct: 172 RLV 174
Score = 39.5 bits (88), Expect = 0.002
Identities = 19/69 (27%), Positives = 41/69 (59%)
Frame = +1
Query: 259 DKMLESLDMRRDVQEIFRNTPHGKQVMMFSATLSKEIRPVCKXFMQDPMEVYVDDEAKLK 438
D++L ++D ++ +I + P ++ +FSAT++K++ + + ++DP V V K
Sbjct: 197 DRIL-NMDFEVELDKILKVIPRERRTYLFSATMTKKVSKLERASLRDPARVSVSSRYK-T 254
Query: 439 LHGLQQHYV 465
+ L+QHY+
Sbjct: 255 VDNLKQHYI 263
>EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein.
Length = 973
Score = 45.2 bits (102), Expect = 5e-05
Identities = 26/84 (30%), Positives = 41/84 (48%)
Frame = +2
Query: 2 HVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACPHIVVGT 181
H+ +++ TRE++ QI + + + +G R SV+ GG + + LK P IV+GT
Sbjct: 90 HIQKVIVTPTREISVQIKETVRKVAP--TGARTSVYVGGSAHKLNLIDLKQTRPQIVIGT 147
Query: 182 PGRILAXXXXXXXXXXXXXXFILD 253
PGRI F+LD
Sbjct: 148 PGRIAQLVKLGAMNMSHVDFFVLD 171
>CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical
protein T06A10.1 protein.
Length = 973
Score = 45.2 bits (102), Expect = 5e-05
Identities = 26/84 (30%), Positives = 41/84 (48%)
Frame = +2
Query: 2 HVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACPHIVVGT 181
H+ +++ TRE++ QI + + + +G R SV+ GG + + LK P IV+GT
Sbjct: 90 HIQKVIVTPTREISVQIKETVRKVAP--TGARTSVYVGGSAHKLNLIDLKQTRPQIVIGT 147
Query: 182 PGRILAXXXXXXXXXXXXXXFILD 253
PGRI F+LD
Sbjct: 148 PGRIAQLVKLGAMNMSHVDFFVLD 171
>AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical
protein Y71G12B.8 protein.
Length = 763
Score = 44.4 bits (100), Expect = 8e-05
Identities = 22/62 (35%), Positives = 39/62 (62%)
Frame = +2
Query: 11 VLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACPHIVVGTPGR 190
VLV+ TRELA Q+ + + + S ++ + V + GG+ ++ E L++ P +VV TPGR
Sbjct: 222 VLVLVPTRELAIQVFQVFRKLSTFIQ-LEVCLCAGGLDLKAQEAALRSG-PDVVVATPGR 279
Query: 191 IL 196
++
Sbjct: 280 LI 281
>AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical
protein Y71H2AM.19 protein.
Length = 643
Score = 43.2 bits (97), Expect = 2e-04
Identities = 23/62 (37%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Frame = +2
Query: 14 LVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDE-EVLKTACPHIVVGTPGR 190
LV+ TREL+ QI E +F+ Y + + ++ +GG KD+ L+ C HI++ TPGR
Sbjct: 254 LVLSPTRELSLQIFNESRKFA-YRTPITSALLYGGRENYKDQIHKLRLGC-HILIATPGR 311
Query: 191 IL 196
++
Sbjct: 312 LI 313
>AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical
protein F53H1.1 protein.
Length = 970
Score = 41.9 bits (94), Expect = 4e-04
Identities = 24/61 (39%), Positives = 38/61 (62%)
Frame = +2
Query: 14 LVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACPHIVVGTPGRI 193
+++ TRELA Q KE +F+K + G++V+ +GG+ I + LK IVV TPGR+
Sbjct: 381 VILAPTRELAMQTYKEANKFAKPL-GLKVACTYGGVGISEQIADLKRGA-EIVVCTPGRM 438
Query: 194 L 196
+
Sbjct: 439 I 439
Score = 28.7 bits (61), Expect = 4.4
Identities = 12/53 (22%), Positives = 26/53 (49%)
Frame = +1
Query: 259 DKMLESLDMRRDVQEIFRNTPHGKQVMMFSATLSKEIRPVCKXFMQDPMEVYV 417
D+M + + ++ N KQ ++FSAT + + + + + P+E+ V
Sbjct: 464 DRMFDK-GFEPQIMKVVNNIRPDKQTVLFSATFPRHMEALARKVLDKPVEILV 515
>U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical
protein F01F1.7 protein.
Length = 730
Score = 41.5 bits (93), Expect = 6e-04
Identities = 23/63 (36%), Positives = 35/63 (55%)
Frame = +2
Query: 8 YVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACPHIVVGTPG 187
Y ++M TRELA QI +E +F K + VSV G ++D+ + +V+ TPG
Sbjct: 380 YAIIMAPTRELAQQIEEETNKFGKLLGIKTVSVIGGAS--REDQGMKLRMGVEVVIATPG 437
Query: 188 RIL 196
R+L
Sbjct: 438 RLL 440
>AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical
protein Y23H5B.6 protein.
Length = 732
Score = 41.5 bits (93), Expect = 6e-04
Identities = 21/70 (30%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
Frame = +1
Query: 259 DKMLESLDMRRDVQEIFRNTPHGKQVMMFSATLSKEIRPVCKXFMQDPMEVYVDDEAKLK 438
D+ML+ + + + I N P +Q ++FSAT ++ ++ +C+ DP+ V V + A
Sbjct: 232 DRMLD-MGFSKQLNSIINNLPAERQTLLFSATQTRNVKDLCRVCTNDPVFVSVHENASAA 290
Query: 439 L-HGLQQHYV 465
L+Q YV
Sbjct: 291 TPDNLKQSYV 300
>AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved
germline helicase protein1 protein.
Length = 430
Score = 39.5 bits (88), Expect = 0.002
Identities = 23/64 (35%), Positives = 37/64 (57%)
Frame = +2
Query: 5 VYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACPHIVVGTP 184
+ +V+ TRELA Q S+ SK++ ++V V GG + +D+ + H+V+ TP
Sbjct: 112 IQAMVIVPTRELALQTSQICVELSKHIQ-LKVMVTTGGTDL-RDDIMRLNGTVHLVIATP 169
Query: 185 GRIL 196
GRIL
Sbjct: 170 GRIL 173
Score = 35.1 bits (77), Expect = 0.051
Identities = 25/79 (31%), Positives = 39/79 (49%)
Frame = +1
Query: 226 ETFKTLHP*WCDKMLESLDMRRDVQEIFRNTPHGKQVMMFSATLSKEIRPVCKXFMQDPM 405
E KTL DK+L S D + + + P +QVM++SAT + + M P
Sbjct: 184 EHCKTLVLDEADKLL-SQDFQGILDRLINFLPKERQVMLYSATFPNTVTSFMQKHMHKPY 242
Query: 406 EVYVDDEAKLKLHGLQQHY 462
E+ + +E L L G+ Q+Y
Sbjct: 243 EINLMEE--LTLLGVTQYY 259
>U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical
protein F55F8.2b protein.
Length = 579
Score = 39.1 bits (87), Expect = 0.003
Identities = 22/62 (35%), Positives = 30/62 (48%)
Frame = +2
Query: 14 LVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACPHIVVGTPGRI 193
L++ TREL QI K + S+ GG+ K E ++ P IVV TPGR+
Sbjct: 72 LIVAPTRELVIQIMKHINALISTTQLIATSIV-GGLAQVKQERIISQQRPDIVVATPGRL 130
Query: 194 LA 199
A
Sbjct: 131 WA 132
>U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical
protein F55F8.2a protein.
Length = 746
Score = 39.1 bits (87), Expect = 0.003
Identities = 22/62 (35%), Positives = 30/62 (48%)
Frame = +2
Query: 14 LVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACPHIVVGTPGRI 193
L++ TREL QI K + S+ GG+ K E ++ P IVV TPGR+
Sbjct: 239 LIVAPTRELVIQIMKHINALISTTQLIATSIV-GGLAQVKQERIISQQRPDIVVATPGRL 297
Query: 194 LA 199
A
Sbjct: 298 WA 299
>AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical
protein B0511.6 protein.
Length = 544
Score = 39.1 bits (87), Expect = 0.003
Identities = 22/71 (30%), Positives = 44/71 (61%), Gaps = 2/71 (2%)
Frame = +1
Query: 259 DKMLESLDMRRDVQEIFRNTPHGKQVMMFSATLSKEIRPVCKXFM-QDPMEVYVDDEA-K 432
D++L+ + ++Q++ R+ P +Q M+FSAT S ++ + K + +P+ V V ++A +
Sbjct: 225 DRILD-IGFEIEMQQVLRHLPKQRQSMLFSATHSPKVDELVKLALHSNPVRVSVHEKAEE 283
Query: 433 LKLHGLQQHYV 465
+ GLQQ Y+
Sbjct: 284 ATVEGLQQGYI 294
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 38.7 bits (86), Expect = 0.004
Identities = 21/60 (35%), Positives = 35/60 (58%)
Frame = +2
Query: 14 LVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACPHIVVGTPGRI 193
+++ TRELA QI E +FS Y S + + +GG+ + ++ + C I+VGT GR+
Sbjct: 379 IILTPTRELADQIYNEGRKFS-YQSVMEIKPVYGGINVGYNKSQIMKGCT-IIVGTIGRV 436
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/60 (23%), Positives = 33/60 (55%), Gaps = 4/60 (6%)
Frame = +1
Query: 259 DKMLESLDMRRDVQEI--FRNTPHG--KQVMMFSATLSKEIRPVCKXFMQDPMEVYVDDE 426
D+M++S+ ++++I ++N P +Q MMFSAT ++ + +++ + D+
Sbjct: 459 DRMIDSMGFGPEIEQIINYKNMPKNDKRQTMMFSATFPSSVQEAARKLLREDYTMITIDK 518
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 38.7 bits (86), Expect = 0.004
Identities = 21/60 (35%), Positives = 35/60 (58%)
Frame = +2
Query: 14 LVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACPHIVVGTPGRI 193
+++ TRELA QI E +FS Y S + + +GG+ + ++ + C I+VGT GR+
Sbjct: 379 IILTPTRELADQIYNEGRKFS-YQSVMEIKPVYGGINVGYNKSQIMKGCT-IIVGTIGRV 436
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/60 (23%), Positives = 33/60 (55%), Gaps = 4/60 (6%)
Frame = +1
Query: 259 DKMLESLDMRRDVQEI--FRNTPHG--KQVMMFSATLSKEIRPVCKXFMQDPMEVYVDDE 426
D+M++S+ ++++I ++N P +Q MMFSAT ++ + +++ + D+
Sbjct: 459 DRMIDSMGFGPEIEQIINYKNMPKNDKRQTMMFSATFPSSVQEAARKLLREDYTMITIDK 518
>AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical
protein Y94H6A.5a protein.
Length = 825
Score = 35.9 bits (79), Expect = 0.029
Identities = 18/59 (30%), Positives = 32/59 (54%)
Frame = +1
Query: 259 DKMLESLDMRRDVQEIFRNTPHGKQVMMFSATLSKEIRPVCKXFMQDPMEVYVDDEAKL 435
D++ E + + + E + P +Q ++FSATL K + K + DPM V +D + K+
Sbjct: 177 DRLFE-MGFQDQLTETLKRIPESRQTLLFSATLPKMLVDFAKAGLTDPMLVRLDVDEKV 234
Score = 35.1 bits (77), Expect = 0.051
Identities = 20/64 (31%), Positives = 35/64 (54%)
Frame = +2
Query: 5 VYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACPHIVVGTP 184
+ L++ TRELA Q K + ++ +G+R + GG I++ + P I++ TP
Sbjct: 94 IRALMVSPTRELALQTFKVVKELGRF-TGLRCACLVGGDQIEEQFSTIHEN-PDILLATP 151
Query: 185 GRIL 196
GR+L
Sbjct: 152 GRLL 155
>AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical
protein Y94H6A.5b protein.
Length = 871
Score = 35.9 bits (79), Expect = 0.029
Identities = 18/59 (30%), Positives = 32/59 (54%)
Frame = +1
Query: 259 DKMLESLDMRRDVQEIFRNTPHGKQVMMFSATLSKEIRPVCKXFMQDPMEVYVDDEAKL 435
D++ E + + + E + P +Q ++FSATL K + K + DPM V +D + K+
Sbjct: 177 DRLFE-MGFQDQLTETLKRIPESRQTLLFSATLPKMLVDFAKAGLTDPMLVRLDVDEKV 234
Score = 35.1 bits (77), Expect = 0.051
Identities = 20/64 (31%), Positives = 35/64 (54%)
Frame = +2
Query: 5 VYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACPHIVVGTP 184
+ L++ TRELA Q K + ++ +G+R + GG I++ + P I++ TP
Sbjct: 94 IRALMVSPTRELALQTFKVVKELGRF-TGLRCACLVGGDQIEEQFSTIHEN-PDILLATP 151
Query: 185 GRIL 196
GR+L
Sbjct: 152 GRLL 155
>AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical
protein Y54G11A.3 protein.
Length = 504
Score = 35.5 bits (78), Expect = 0.038
Identities = 22/62 (35%), Positives = 34/62 (54%)
Frame = +2
Query: 8 YVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACPHIVVGTPG 187
+VLV+ TRELA QI E +++S +G + +GG + E + IV+ TPG
Sbjct: 165 FVLVLSPTRELAQQIEGEVKKYS--YNGYKSVCLYGGGSRPEQVEACRGGV-EIVIATPG 221
Query: 188 RI 193
R+
Sbjct: 222 RL 223
>Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical
protein ZK512.2 protein.
Length = 578
Score = 34.3 bits (75), Expect = 0.088
Identities = 18/60 (30%), Positives = 34/60 (56%)
Frame = +2
Query: 14 LVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACPHIVVGTPGRI 193
L++ +REL QI + F++ ++ + V GG + K+ ++ K +I+V TPGR+
Sbjct: 84 LILSPSRELCSQIVSVIQPFAEKLN-LTVETVTGGQKVDKNIKMFKNKNVNILVATPGRL 142
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 33.1 bits (72), Expect = 0.20
Identities = 23/62 (37%), Positives = 33/62 (53%)
Frame = +2
Query: 11 VLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACPHIVVGTPGR 190
VLV+ TRELA Q+ + F + G++++ FGG L+ IVV TPGR
Sbjct: 205 VLVLLPTRELAQQVQEVSIDFCHSL-GLKMTCLFGGASKGPQARDLERGVD-IVVATPGR 262
Query: 191 IL 196
+L
Sbjct: 263 LL 264
Score = 31.5 bits (68), Expect = 0.62
Identities = 15/47 (31%), Positives = 26/47 (55%)
Frame = +1
Query: 259 DKMLESLDMRRDVQEIFRNTPHGKQVMMFSATLSKEIRPVCKXFMQD 399
D+ML+ + +++I +Q +MFSAT KE+R + F +D
Sbjct: 286 DRMLD-MGFEPQIKKIIGQIRPDRQTLMFSATWPKEVRALASDFQKD 331
>AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical
protein H27M09.1 protein.
Length = 630
Score = 30.3 bits (65), Expect = 1.4
Identities = 21/65 (32%), Positives = 36/65 (55%), Gaps = 5/65 (7%)
Frame = +2
Query: 14 LVMCHTRELAFQIS----KEYERFSKY-MSGVRVSVFFGGMPIQKDEEVLKTACPHIVVG 178
L++ +RELA QI + ++ K + +R + GG+PI + + ++ HIVV
Sbjct: 270 LIIVPSRELARQIFDLIIEMFDALGKAGLPEMRAGLCIGGVPIGEQAKDVRDGI-HIVVA 328
Query: 179 TPGRI 193
TPGR+
Sbjct: 329 TPGRL 333
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,845,424
Number of Sequences: 27780
Number of extensions: 307972
Number of successful extensions: 809
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 714
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 795
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1676746902
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -