Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40080
(705 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC047471-1|AAH47471.1| 148|Homo sapiens DPY19L2P4 protein protein. 31 4.0
D64159-1|BAA21515.1| 709|Homo sapiens hypothetical protein prot... 31 5.3
BC132736-1|AAI32737.1| 1843|Homo sapiens coiled-coil domain cont... 31 5.3
BC126291-1|AAI26292.1| 265|Homo sapiens C-type lectin domain fa... 31 5.3
BC126289-1|AAI26290.1| 265|Homo sapiens C-type lectin domain fa... 31 5.3
BC078168-1|AAH78168.1| 887|Homo sapiens CCDC88A protein protein. 31 5.3
BC060037-1|AAH60037.1| 622|Homo sapiens CCDC88A protein protein. 31 5.3
BC041160-1|AAH41160.1| 501|Homo sapiens CCDC88A protein protein. 31 5.3
AY547296-1|AAT11783.1| 275|Homo sapiens C-type lectin-like mole... 31 5.3
AY498551-1|AAS00606.1| 232|Homo sapiens myeloid inhibitory C-ty... 31 5.3
AY498550-1|AAS00605.1| 265|Homo sapiens myeloid inhibitory C-ty... 31 5.3
AY426759-1|AAR84594.1| 265|Homo sapiens dendritic cell associat... 31 5.3
AF247788-1|AAL95693.1| 265|Homo sapiens C-type lectin protein C... 31 5.3
AF112218-1|AAF17206.1| 742|Homo sapiens unknown protein. 31 5.3
AB201172-1|BAE44387.1| 1870|Homo sapiens girdin protein. 31 5.3
AB125644-1|BAF44475.1| 1843|Homo sapiens PKB/Akt-binding protein... 31 5.3
AJ487959-1|CAD32306.1| 537|Homo sapiens LGI1-like protein 3 pro... 30 9.3
AJ487519-1|CAD31787.1| 537|Homo sapiens leucine-rich glioma ina... 30 9.3
AF467954-1|AAM49552.1| 537|Homo sapiens LGI4 protein. 30 9.3
>BC047471-1|AAH47471.1| 148|Homo sapiens DPY19L2P4 protein protein.
Length = 148
Score = 31.1 bits (67), Expect = 4.0
Identities = 31/135 (22%), Positives = 52/135 (38%), Gaps = 2/135 (1%)
Frame = +2
Query: 251 TSKRRRCSPFAASPSTSPGVKTSESRPSSF--GESVSAPVKITPERMAQEIYDEIKRLHR 424
+ +RRC P P+++P + E S+ G S ++ R E+ K L
Sbjct: 17 SQSKRRCGPPPFPPASAPEPEVEEVEKSALGGGRSFRRRIRNVENRKGLELKVVAKTLLL 76
Query: 425 RGQLRLANXXXXXXXXXXXXXXXXXPPHISSLFTNVLAFLHYSLFYRVRMICERMLHDSE 604
L + N P + F ++A+LH+ + V+ +CE H S
Sbjct: 77 GPFLLVRNSLAQLREEVHELQAWWFPSRTTLDFAVLVAYLHW--LHLVK-LCENYRHFSH 133
Query: 605 VGSTVLSMNLYFFHQ 649
+ S L + F HQ
Sbjct: 134 LSS--LEREMTFLHQ 146
>D64159-1|BAA21515.1| 709|Homo sapiens hypothetical protein
protein.
Length = 709
Score = 30.7 bits (66), Expect = 5.3
Identities = 19/49 (38%), Positives = 27/49 (55%)
Frame = +2
Query: 272 SPFAASPSTSPGVKTSESRPSSFGESVSAPVKITPERMAQEIYDEIKRL 418
S A SP SPG+K +ESR E A KI R+ QE+ ++ ++L
Sbjct: 153 SSSAQSPCGSPGMKRTESRQHLSVELADAKAKI--RRLRQELEEKTEQL 199
>BC132736-1|AAI32737.1| 1843|Homo sapiens coiled-coil domain
containing 88A protein.
Length = 1843
Score = 30.7 bits (66), Expect = 5.3
Identities = 19/49 (38%), Positives = 27/49 (55%)
Frame = +2
Query: 272 SPFAASPSTSPGVKTSESRPSSFGESVSAPVKITPERMAQEIYDEIKRL 418
S A SP SPG+K +ESR E A KI R+ QE+ ++ ++L
Sbjct: 228 SSSAQSPCGSPGMKRTESRQHLSVELADAKAKI--RRLRQELEEKTEQL 274
>BC126291-1|AAI26292.1| 265|Homo sapiens C-type lectin domain
family 12, member A protein.
Length = 265
Score = 30.7 bits (66), Expect = 5.3
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +2
Query: 521 FTNVLAFLHYSLFYRVRMICERMLHDSEVGST 616
+ N L +Y Y+ RMICE+M + ++GST
Sbjct: 229 YINRLYVQYYHCTYKQRMICEKMANPVQLGST 260
>BC126289-1|AAI26290.1| 265|Homo sapiens C-type lectin domain
family 12, member A protein.
Length = 265
Score = 30.7 bits (66), Expect = 5.3
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +2
Query: 521 FTNVLAFLHYSLFYRVRMICERMLHDSEVGST 616
+ N L +Y Y+ RMICE+M + ++GST
Sbjct: 229 YINRLYVQYYHCTYKQRMICEKMANPVQLGST 260
>BC078168-1|AAH78168.1| 887|Homo sapiens CCDC88A protein protein.
Length = 887
Score = 30.7 bits (66), Expect = 5.3
Identities = 19/49 (38%), Positives = 27/49 (55%)
Frame = +2
Query: 272 SPFAASPSTSPGVKTSESRPSSFGESVSAPVKITPERMAQEIYDEIKRL 418
S A SP SPG+K +ESR E A KI R+ QE+ ++ ++L
Sbjct: 225 SSSAQSPCGSPGMKRTESRQHLSVELADAKAKI--RRLRQELEEKTEQL 271
>BC060037-1|AAH60037.1| 622|Homo sapiens CCDC88A protein protein.
Length = 622
Score = 30.7 bits (66), Expect = 5.3
Identities = 19/49 (38%), Positives = 27/49 (55%)
Frame = +2
Query: 272 SPFAASPSTSPGVKTSESRPSSFGESVSAPVKITPERMAQEIYDEIKRL 418
S A SP SPG+K +ESR E A KI R+ QE+ ++ ++L
Sbjct: 228 SSSAQSPCGSPGMKRTESRQHLSVELADAKAKI--RRLRQELEEKTEQL 274
>BC041160-1|AAH41160.1| 501|Homo sapiens CCDC88A protein protein.
Length = 501
Score = 30.7 bits (66), Expect = 5.3
Identities = 19/49 (38%), Positives = 27/49 (55%)
Frame = +2
Query: 272 SPFAASPSTSPGVKTSESRPSSFGESVSAPVKITPERMAQEIYDEIKRL 418
S A SP SPG+K +ESR E A KI R+ QE+ ++ ++L
Sbjct: 228 SSSAQSPCGSPGMKRTESRQHLSVELADAKAKI--RRLRQELEEKTEQL 274
>AY547296-1|AAT11783.1| 275|Homo sapiens C-type lectin-like
molecule-1 protein.
Length = 275
Score = 30.7 bits (66), Expect = 5.3
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +2
Query: 521 FTNVLAFLHYSLFYRVRMICERMLHDSEVGST 616
+ N L +Y Y+ RMICE+M + ++GST
Sbjct: 239 YINRLYVQYYHCTYKKRMICEKMANPVQLGST 270
>AY498551-1|AAS00606.1| 232|Homo sapiens myeloid inhibitory C-type
lectin-like receptor isoform beta protein.
Length = 232
Score = 30.7 bits (66), Expect = 5.3
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +2
Query: 521 FTNVLAFLHYSLFYRVRMICERMLHDSEVGST 616
+ N L +Y Y+ RMICE+M + ++GST
Sbjct: 196 YINRLYVQYYHCTYKQRMICEKMANPVQLGST 227
>AY498550-1|AAS00605.1| 265|Homo sapiens myeloid inhibitory C-type
lectin-like receptor isoform alpha protein.
Length = 265
Score = 30.7 bits (66), Expect = 5.3
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +2
Query: 521 FTNVLAFLHYSLFYRVRMICERMLHDSEVGST 616
+ N L +Y Y+ RMICE+M + ++GST
Sbjct: 229 YINRLYVQYYHCTYKQRMICEKMANPVQLGST 260
>AY426759-1|AAR84594.1| 265|Homo sapiens dendritic cell associated
lectin 2 protein.
Length = 265
Score = 30.7 bits (66), Expect = 5.3
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +2
Query: 521 FTNVLAFLHYSLFYRVRMICERMLHDSEVGST 616
+ N L +Y Y+ RMICE+M + ++GST
Sbjct: 229 YINRLYVQYYHCTYKQRMICEKMANPVQLGST 260
>AF247788-1|AAL95693.1| 265|Homo sapiens C-type lectin protein
CLL-1 protein.
Length = 265
Score = 30.7 bits (66), Expect = 5.3
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +2
Query: 521 FTNVLAFLHYSLFYRVRMICERMLHDSEVGST 616
+ N L +Y Y+ RMICE+M + ++GST
Sbjct: 229 YINRLYVQYYHCTYKQRMICEKMANPVQLGST 260
>AF112218-1|AAF17206.1| 742|Homo sapiens unknown protein.
Length = 742
Score = 30.7 bits (66), Expect = 5.3
Identities = 19/49 (38%), Positives = 27/49 (55%)
Frame = +2
Query: 272 SPFAASPSTSPGVKTSESRPSSFGESVSAPVKITPERMAQEIYDEIKRL 418
S A SP SPG+K +ESR E A KI R+ QE+ ++ ++L
Sbjct: 153 SSSAQSPCGSPGMKRTESRQHLSVELADAKAKI--RRLRQELEEKTEQL 199
>AB201172-1|BAE44387.1| 1870|Homo sapiens girdin protein.
Length = 1870
Score = 30.7 bits (66), Expect = 5.3
Identities = 19/49 (38%), Positives = 27/49 (55%)
Frame = +2
Query: 272 SPFAASPSTSPGVKTSESRPSSFGESVSAPVKITPERMAQEIYDEIKRL 418
S A SP SPG+K +ESR E A KI R+ QE+ ++ ++L
Sbjct: 228 SSSAQSPCGSPGMKRTESRQHLSVELADAKAKI--RRLRQELEEKTEQL 274
>AB125644-1|BAF44475.1| 1843|Homo sapiens PKB/Akt-binding protein
protein.
Length = 1843
Score = 30.7 bits (66), Expect = 5.3
Identities = 19/49 (38%), Positives = 27/49 (55%)
Frame = +2
Query: 272 SPFAASPSTSPGVKTSESRPSSFGESVSAPVKITPERMAQEIYDEIKRL 418
S A SP SPG+K +ESR E A KI R+ QE+ ++ ++L
Sbjct: 228 SSSAQSPCGSPGMKRTESRQHLSVELADAKAKI--RRLRQELEEKTEQL 274
>AJ487959-1|CAD32306.1| 537|Homo sapiens LGI1-like protein 3
protein.
Length = 537
Score = 29.9 bits (64), Expect = 9.3
Identities = 15/49 (30%), Positives = 23/49 (46%)
Frame = +3
Query: 384 WHKRFMMRLNDCIDVDSCAWPTALLHHAHHPVDPQETVHRLISAHCSQT 530
W ++M +N + +CA P +L H H +DP+ R I QT
Sbjct: 168 WLLQWMPTVNASVGTGACAGPASLSHMQLHHLDPKTFKCRAIELSWFQT 216
>AJ487519-1|CAD31787.1| 537|Homo sapiens leucine-rich glioma
inactivated protein 4 protein.
Length = 537
Score = 29.9 bits (64), Expect = 9.3
Identities = 15/49 (30%), Positives = 23/49 (46%)
Frame = +3
Query: 384 WHKRFMMRLNDCIDVDSCAWPTALLHHAHHPVDPQETVHRLISAHCSQT 530
W ++M +N + +CA P +L H H +DP+ R I QT
Sbjct: 168 WLLQWMPTVNASVGTGACAGPASLSHMQLHHLDPKTFKCRAIELSWFQT 216
>AF467954-1|AAM49552.1| 537|Homo sapiens LGI4 protein.
Length = 537
Score = 29.9 bits (64), Expect = 9.3
Identities = 15/49 (30%), Positives = 23/49 (46%)
Frame = +3
Query: 384 WHKRFMMRLNDCIDVDSCAWPTALLHHAHHPVDPQETVHRLISAHCSQT 530
W ++M +N + +CA P +L H H +DP+ R I QT
Sbjct: 168 WLLQWMPTVNASVGTGACAGPASLSHMQLHHLDPKTFKCRAIELSWFQT 216
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,470,077
Number of Sequences: 237096
Number of extensions: 2184592
Number of successful extensions: 8962
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 8697
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8949
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8175213644
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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