Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40079
         (666 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      25   0.74 
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      25   0.74 
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    23   2.2  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    21   6.9  
AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esteras...    21   6.9  
AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esteras...    21   6.9  
AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esteras...    21   6.9  
AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esteras...    21   6.9  
AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esteras...    21   6.9  

>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 24.6 bits (51), Expect = 0.74
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = +3

Query: 309 PLERYPTPIVKDEPQTVPSAASTPPLSPI 395
           P  +YP PI+  E   V ++  TP + P+
Sbjct: 168 PAGQYPYPILSPEMSQVAASWHTPSMYPL 196


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 24.6 bits (51), Expect = 0.74
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = +3

Query: 309 PLERYPTPIVKDEPQTVPSAASTPPLSPI 395
           P  +YP PI+  E   V ++  TP + P+
Sbjct: 60  PAGQYPYPILSPEMSQVAASWHTPSMYPL 88


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 10/28 (35%), Positives = 12/28 (42%)
 Frame = -1

Query: 372 WPRSAPSGARPSRWEWGIALAACPNRHI 289
           +PR   S   P +W W      C  RHI
Sbjct: 45  YPRQKKS--HPPQWTWQCINQRCERRHI 70


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = +3

Query: 339 KDEPQTVPSAASTPPLSP 392
           K  PQ  PS +STP   P
Sbjct: 68  KKSPQGAPSPSSTPSSLP 85


>AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esterase
          protein.
          Length = 539

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = +3

Query: 12 PNLGCWAGWETFTN 53
          PNLG   GW+T  N
Sbjct: 22 PNLGKVEGWQTTMN 35


>AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esterase
          protein.
          Length = 539

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = +3

Query: 12 PNLGCWAGWETFTN 53
          PNLG   GW+T  N
Sbjct: 22 PNLGKVEGWQTTMN 35


>AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esterase
          protein.
          Length = 539

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = +3

Query: 12 PNLGCWAGWETFTN 53
          PNLG   GW+T  N
Sbjct: 22 PNLGKVEGWQTTMN 35


>AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esterase
          protein.
          Length = 539

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = +3

Query: 12 PNLGCWAGWETFTN 53
          PNLG   GW+T  N
Sbjct: 22 PNLGKVEGWQTTMN 35


>AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esterase
          protein.
          Length = 539

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = +3

Query: 12 PNLGCWAGWETFTN 53
          PNLG   GW+T  N
Sbjct: 22 PNLGKVEGWQTTMN 35


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 145,652
Number of Sequences: 336
Number of extensions: 3013
Number of successful extensions: 11
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17281430
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)