Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40079
         (666 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         25   2.8  
AY462096-1|AAS21248.1|  603|Anopheles gambiae transposase protein.     24   3.7  
AY176048-1|AAO19579.1|  521|Anopheles gambiae cytochrome P450 CY...    24   3.7  
AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcript...    24   3.7  
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ...    24   5.0  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            24   5.0  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            24   5.0  
Z69979-1|CAA93819.1|  127|Anopheles gambiae vacuolar ATPase prot...    23   6.5  
AY263175-1|AAP78790.1|  814|Anopheles gambiae TmcA-like protein ...    23   8.7  

>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 24.6 bits (51), Expect = 2.8
 Identities = 11/40 (27%), Positives = 20/40 (50%)
 Frame = +2

Query: 353  DGAERGQHAAAITHRHGHSGKDQTGEKETEESGSRFQM*T 472
            DG +      A   +    G+D TG+K+T+  G+  ++ T
Sbjct: 1249 DGLKMENGVIAEVEKSQVDGEDDTGDKKTDSDGTLLEIGT 1288


>AY462096-1|AAS21248.1|  603|Anopheles gambiae transposase protein.
          Length = 603

 Score = 24.2 bits (50), Expect = 3.7
 Identities = 11/42 (26%), Positives = 23/42 (54%)
 Frame = +3

Query: 330 PIVKDEPQTVPSAASTPPLSPIDMDTQEKIKLERKRQRNRVA 455
           P+V++  + V     +P  S +  DTQ+K+ L++ +    V+
Sbjct: 285 PVVEEVKRVVMLFKKSPKASQMLADTQKKLNLDQLKMIQEVS 326


>AY176048-1|AAO19579.1|  521|Anopheles gambiae cytochrome P450
           CYP12F4 protein.
          Length = 521

 Score = 24.2 bits (50), Expect = 3.7
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = -1

Query: 357 PSGARPSRWEWGIALAACPN 298
           PS   P RW  G A A CP+
Sbjct: 430 PSEFMPERWLSGEAAAGCPS 449


>AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1049

 Score = 24.2 bits (50), Expect = 3.7
 Identities = 11/38 (28%), Positives = 16/38 (42%)
 Frame = +3

Query: 321 YPTPIVKDEPQTVPSAASTPPLSPIDMDTQEKIKLERK 434
           YP    K  P  +    +TP   P+ +  QE I L  +
Sbjct: 428 YPDVFKKRAPPNLSPTINTPETDPVPITRQEIINLANR 465


>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 1222

 Score = 23.8 bits (49), Expect = 5.0
 Identities = 12/39 (30%), Positives = 19/39 (48%)
 Frame = -1

Query: 363 SAPSGARPSRWEWGIALAACPNRHILDVRAASLPRRVQL 247
           ++PS ARP  W    +  A  +R++L     + P   QL
Sbjct: 190 ASPSIARPDTWVVSTSYTASDHRYVLYTVGGTPPSPEQL 228


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 23.8 bits (49), Expect = 5.0
 Identities = 18/72 (25%), Positives = 30/72 (41%)
 Frame = +3

Query: 69  LLARFTNVEARIS*VGKIDHSERYGDNRYPYSGSACLISRSSTYGGTRNVCATFRRSARQ 248
           L+A+F     +I     I+H + +   R  Y  +  LI   + +G  R        S   
Sbjct: 689 LIAKFDYTLLQIDSNMLINHFKIHSHPRTAYGPTYLLIGDITKHGQVRIQLRDHLGSDTV 748

Query: 249 AAHGEAVTPLGR 284
           A  G ++ PLG+
Sbjct: 749 AVDGSSIPPLGK 760


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 23.8 bits (49), Expect = 5.0
 Identities = 18/72 (25%), Positives = 30/72 (41%)
 Frame = +3

Query: 69  LLARFTNVEARIS*VGKIDHSERYGDNRYPYSGSACLISRSSTYGGTRNVCATFRRSARQ 248
           L+A+F     +I     I+H + +   R  Y  +  LI   + +G  R        S   
Sbjct: 690 LIAKFDYTLLQIDSNMLINHFKIHSHPRTAYGPTYLLIGDITKHGQVRIQLRDHLGSDTV 749

Query: 249 AAHGEAVTPLGR 284
           A  G ++ PLG+
Sbjct: 750 AVDGSSIPPLGK 761


>Z69979-1|CAA93819.1|  127|Anopheles gambiae vacuolar ATPase
          protein.
          Length = 127

 Score = 23.4 bits (48), Expect = 6.5
 Identities = 7/15 (46%), Positives = 13/15 (86%)
 Frame = +2

Query: 20 WMLGGVGNVHESLHP 64
          ++LGGVG ++++ HP
Sbjct: 24 FLLGGVGEINKNRHP 38


>AY263175-1|AAP78790.1|  814|Anopheles gambiae TmcA-like protein
           protein.
          Length = 814

 Score = 23.0 bits (47), Expect = 8.7
 Identities = 10/15 (66%), Positives = 12/15 (80%)
 Frame = +3

Query: 39  ETFTNRCTRSLLARF 83
           E FT+R  RSLLA+F
Sbjct: 95  EHFTSRTARSLLAQF 109


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 667,934
Number of Sequences: 2352
Number of extensions: 12631
Number of successful extensions: 33
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 66486645
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)