Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40078
(734 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P50991 Cluster: T-complex protein 1 subunit delta; n=13... 74 4e-12
UniRef50_Q4PBE2 Cluster: T-complex protein 1, delta subunit; n=1... 64 3e-09
UniRef50_A2Z9B2 Cluster: T-complex protein 1, delta subunit; n=1... 52 1e-05
UniRef50_P48643 Cluster: T-complex protein 1 subunit epsilon; n=... 50 6e-05
UniRef50_Q4MYW8 Cluster: T-complex protein 1, beta subunit, puta... 45 0.002
UniRef50_UPI0000498BB7 Cluster: T-complex protein 1 alpha subuni... 45 0.002
UniRef50_P50016 Cluster: Thermosome subunit; n=20; Archaea|Rep: ... 44 0.005
UniRef50_A0DD79 Cluster: T-complex protein 1, delta subunit; n=1... 42 0.012
UniRef50_Q8SSH3 Cluster: T COMPLEX PROTEIN 1 DELTA SUBUNIT; n=1;... 41 0.027
UniRef50_Q8THU8 Cluster: Hsp60; n=4; Archaea|Rep: Hsp60 - Methan... 41 0.027
UniRef50_A2XJL6 Cluster: Putative uncharacterized protein; n=1; ... 41 0.036
UniRef50_Q9V2Q7 Cluster: Thermosome subunit; n=20; Euryarchaeota... 41 0.036
UniRef50_A6S086 Cluster: Putative uncharacterized protein; n=1; ... 40 0.048
UniRef50_Q12UN6 Cluster: Thermosome subunit, group II chaperonin... 40 0.048
UniRef50_Q99832 Cluster: T-complex protein 1 subunit eta; n=135;... 40 0.048
UniRef50_Q1VNP5 Cluster: HSP60 family chaperonin; n=1; Psychrofl... 39 0.11
UniRef50_O30560 Cluster: Thermosome subunit 2; n=8; Euryarchaeot... 39 0.11
UniRef50_Q1VIJ2 Cluster: Thermosome subunit 1; n=1; Psychroflexu... 39 0.15
UniRef50_Q4N0D4 Cluster: T-complex protein 1, eta subunit, putat... 39 0.15
UniRef50_P78371 Cluster: T-complex protein 1 subunit beta; n=145... 39 0.15
UniRef50_Q7R1S9 Cluster: GLP_190_44957_46648; n=2; Giardia intes... 38 0.19
UniRef50_Q9HNI0 Cluster: Thermosome subunit beta; n=13; Euryarch... 38 0.19
UniRef50_Q9HHA2 Cluster: Thermosome subunit 3; n=5; root|Rep: Th... 38 0.19
UniRef50_A7PYP3 Cluster: Chromosome chr12 scaffold_38, whole gen... 38 0.34
UniRef50_Q98S92 Cluster: T-complex protein1 eta SU; n=1; Guillar... 37 0.45
UniRef50_Q2FPE0 Cluster: Chaperonin Cpn60/TCP-1; n=4; Methanomic... 37 0.59
UniRef50_A7PW56 Cluster: Chromosome chr8 scaffold_34, whole geno... 36 0.78
UniRef50_A7D1F1 Cluster: Chaperonin Cpn60/TCP-1; n=1; Halorubrum... 36 0.78
UniRef50_Q3ILY6 Cluster: Thermosome subunit 4; n=1; Natronomonas... 36 1.0
UniRef50_Q7QZG3 Cluster: GLP_159_66836_65142; n=2; Giardia intes... 35 1.8
UniRef50_Q8Q0R4 Cluster: Thermosome subunit; n=4; Methanosarcina... 35 1.8
UniRef50_Q5V6S3 Cluster: Thermosome alpha subunit; n=1; Haloarcu... 35 1.8
UniRef50_O24734 Cluster: Thermosome subunit alpha; n=24; Thermop... 35 1.8
UniRef50_O81503 Cluster: F9D12.18 protein; n=16; Eukaryota|Rep: ... 35 2.4
UniRef50_Q2NHT5 Cluster: ThsA; n=1; Methanosphaera stadtmanae DS... 34 3.1
UniRef50_UPI000069E986 Cluster: Multiple epidermal growth factor... 34 4.2
UniRef50_Q98S00 Cluster: T-complex protein1, epsilon-SU; n=1; Gu... 34 4.2
UniRef50_Q7QR58 Cluster: GLP_301_27994_26207; n=3; Eukaryota|Rep... 34 4.2
UniRef50_A2FL92 Cluster: TCP-1/cpn60 chaperonin family protein; ... 34 4.2
UniRef50_Q8SQP2 Cluster: T COMPLEX PROTEIN 1 BETA SUBUNIT; n=1; ... 34 4.2
UniRef50_Q9N358 Cluster: T-complex protein 1 subunit theta; n=1;... 34 4.2
UniRef50_UPI000049A5F1 Cluster: T-complex protein 1 theta subuni... 33 5.5
UniRef50_Q4T337 Cluster: Chromosome undetermined SCAF10125, whol... 33 5.5
UniRef50_Q4SUF2 Cluster: Chromosome undetermined SCAF13960, whol... 33 5.5
UniRef50_Q4S6V3 Cluster: T-complex protein 1, alpha subunit; n=3... 33 5.5
UniRef50_Q98S23 Cluster: T-complex protein 1 beta SU; n=1; Guill... 33 5.5
UniRef50_Q8SR53 Cluster: T COMPLEX PROTEIN 1 ETA SUBUNIT; n=1; E... 33 5.5
UniRef50_Q8THX2 Cluster: Hsp60; n=2; Methanosarcina acetivorans|... 33 5.5
UniRef50_P17987 Cluster: T-complex protein 1 subunit alpha; n=21... 33 5.5
UniRef50_Q0W8R0 Cluster: Chaperonin Hsp60; n=1; uncultured metha... 33 7.3
UniRef50_P49368 Cluster: T-complex protein 1 subunit gamma; n=14... 33 7.3
UniRef50_A6GGX9 Cluster: Putative uncharacterized protein; n=1; ... 33 9.6
UniRef50_Q9V2S9 Cluster: Thermosome subunit alpha; n=34; Archaea... 33 9.6
>UniRef50_P50991 Cluster: T-complex protein 1 subunit delta; n=138;
Eukaryota|Rep: T-complex protein 1 subunit delta - Homo
sapiens (Human)
Length = 539
Score = 73.7 bits (173), Expect = 4e-12
Identities = 41/100 (41%), Positives = 62/100 (62%), Gaps = 1/100 (1%)
Frame = -3
Query: 648 KIKTMGQLKDIET*KTLKFVLQKP*DAAQLLLWNHFTANKFSQC*FGEEINEPG-GKYIK 472
K+K M +KDIE + ++F+ K + + FTA+ EE+N G GK +K
Sbjct: 319 KMKIM-VIKDIER-EDIEFIC-KTIGTKPVAHIDQFTADMLGSAELAEEVNLNGSGKLLK 375
Query: 471 MTGCGQGGRTVSVLVRGSSGAVVAEAARSLHDALCAVRCV 352
+TGC G+TV+++VRGS+ V+ EA RS+HDALC +RC+
Sbjct: 376 ITGCASPGKTVTIVVRGSNKLVIEEAERSIHDALCVIRCL 415
Score = 62.9 bits (146), Expect = 8e-09
Identities = 29/34 (85%), Positives = 32/34 (94%)
Frame = -2
Query: 256 SYCLRA*SDALEVIPSTLAENAGLNPIETVTELR 155
SYC+RA +DA+EVIPSTLAENAGLNPI TVTELR
Sbjct: 448 SYCVRAFADAMEVIPSTLAENAGLNPISTVTELR 481
Score = 37.5 bits (83), Expect = 0.34
Identities = 19/26 (73%), Positives = 22/26 (84%)
Frame = -1
Query: 80 EHVLQPLHVTASALALATETVRAILK 3
E V+QPL V+ SAL LATETVR+ILK
Sbjct: 506 ELVVQPLLVSVSALTLATETVRSILK 531
>UniRef50_Q4PBE2 Cluster: T-complex protein 1, delta subunit; n=1;
Ustilago maydis|Rep: T-complex protein 1, delta subunit
- Ustilago maydis (Smut fungus)
Length = 574
Score = 64.1 bits (149), Expect = 3e-09
Identities = 35/92 (38%), Positives = 54/92 (58%)
Frame = -3
Query: 627 LKDIET*KTLKFVLQKP*DAAQLLLWNHFTANKFSQC*FGEEINEPGGKYIKMTGCGQGG 448
+KD+E ++FV K A + FT +K + +E+ + G + +K+TG G
Sbjct: 361 VKDVER-DEIEFV-SKTLGAKPIADIEAFTEDKLASADLIDEVQQNGSRVVKITGIKNMG 418
Query: 447 RTVSVLVRGSSGAVVAEAARSLHDALCAVRCV 352
RTVS+L G++ V+ E+ RSLHDALC VRC+
Sbjct: 419 RTVSILCTGANSLVLEESERSLHDALCVVRCL 450
Score = 55.6 bits (128), Expect = 1e-06
Identities = 27/47 (57%), Positives = 34/47 (72%)
Frame = -2
Query: 256 SYCLRA*SDALEVIPSTLAENAGLNPIETVTELRGLTLLALAVAPVS 116
+YC +A ++ALEVIP+TLAENAGLNPI VTELR L A ++
Sbjct: 483 AYCFQAYAEALEVIPTTLAENAGLNPISIVTELRNRHALGERTAGIN 529
Score = 35.1 bits (77), Expect = 1.8
Identities = 17/31 (54%), Positives = 23/31 (74%)
Frame = -1
Query: 95 TDMRTEHVLQPLHVTASALALATETVRAILK 3
T++ E+VLQPL V SA+ LATETV +L+
Sbjct: 536 TNILEENVLQPLLVNTSAIELATETVSLLLR 566
>UniRef50_A2Z9B2 Cluster: T-complex protein 1, delta subunit; n=1;
Oryza sativa (indica cultivar-group)|Rep: T-complex
protein 1, delta subunit - Oryza sativa subsp. indica
(Rice)
Length = 517
Score = 52.4 bits (120), Expect = 1e-05
Identities = 26/45 (57%), Positives = 34/45 (75%), Gaps = 1/45 (2%)
Frame = -2
Query: 286 ACFSRSTRS-RSYCLRA*SDALEVIPSTLAENAGLNPIETVTELR 155
A +++ R SYC+R ++ALEVIP TL+ENAGL+PI VTELR
Sbjct: 415 AAWAKELRGMESYCVREFAEALEVIPYTLSENAGLDPISIVTELR 459
Score = 34.3 bits (75), Expect = 3.1
Identities = 17/31 (54%), Positives = 23/31 (74%)
Frame = -1
Query: 95 TDMRTEHVLQPLHVTASALALATETVRAILK 3
T++ E+V+QPL V+ SA+ LA E VR ILK
Sbjct: 479 TNILEENVVQPLLVSTSAITLACECVRMILK 509
>UniRef50_P48643 Cluster: T-complex protein 1 subunit epsilon;
n=123; Eukaryota|Rep: T-complex protein 1 subunit
epsilon - Homo sapiens (Human)
Length = 541
Score = 50.0 bits (114), Expect = 6e-05
Identities = 21/33 (63%), Positives = 29/33 (87%)
Frame = -2
Query: 253 YCLRA*SDALEVIPSTLAENAGLNPIETVTELR 155
Y +RA +DALEVIP L+EN+G+NPI+T+TE+R
Sbjct: 446 YAMRAFADALEVIPMALSENSGMNPIQTMTEVR 478
Score = 40.7 bits (91), Expect = 0.036
Identities = 15/33 (45%), Positives = 23/33 (69%)
Frame = -3
Query: 456 QGGRTVSVLVRGSSGAVVAEAARSLHDALCAVR 358
+ R V++ +RG + ++ EA RSLHDALC +R
Sbjct: 378 KNSRAVTIFIRGGNKMIIEEAKRSLHDALCVIR 410
>UniRef50_Q4MYW8 Cluster: T-complex protein 1, beta subunit,
putative; n=2; Theileria|Rep: T-complex protein 1, beta
subunit, putative - Theileria parva
Length = 664
Score = 45.2 bits (102), Expect = 0.002
Identities = 23/57 (40%), Positives = 35/57 (61%)
Frame = -3
Query: 531 KFSQC*FGEEINEPGGKYIKMTGCGQGGRTVSVLVRGSSGAVVAEAARSLHDALCAV 361
K +C EE+ K I+ +GC +GG ++++RG+S V+ EA RSLHDAL +
Sbjct: 474 KLGRCDLIEEVIIGEDKLIRFSGCSRGG-ACTIILRGASTHVLDEAERSLHDALAVL 529
>UniRef50_UPI0000498BB7 Cluster: T-complex protein 1 alpha subunit;
n=1; Entamoeba histolytica HM-1:IMSS|Rep: T-complex
protein 1 alpha subunit - Entamoeba histolytica
HM-1:IMSS
Length = 544
Score = 44.8 bits (101), Expect = 0.002
Identities = 22/64 (34%), Positives = 37/64 (57%)
Frame = -3
Query: 543 FTANKFSQC*FGEEINEPGGKYIKMTGCGQGGRTVSVLVRGSSGAVVAEAARSLHDALCA 364
F + +C ++ + I + GC GG + +VL+RG++ ++ E +RSLHDALC
Sbjct: 342 FDKSNLGECDTFKQEKVGDNELIVLRGCSDGG-SATVLLRGANATMLDEMSRSLHDALCV 400
Query: 363 VRCV 352
+R V
Sbjct: 401 LRRV 404
>UniRef50_P50016 Cluster: Thermosome subunit; n=20; Archaea|Rep:
Thermosome subunit - Methanopyrus kandleri
Length = 545
Score = 43.6 bits (98), Expect = 0.005
Identities = 21/49 (42%), Positives = 30/49 (61%)
Frame = -2
Query: 247 LRA*SDALEVIPSTLAENAGLNPIETVTELRGLTLLALAVAPVSTYAAD 101
+ A +DALE+IP TLAEN+GL+PI+ + +LR A + Y D
Sbjct: 439 VEAFADALEIIPRTLAENSGLDPIDVLVQLRAKHEDGQVTAGIDVYDGD 487
Score = 34.7 bits (76), Expect = 2.4
Identities = 19/49 (38%), Positives = 29/49 (59%)
Frame = -3
Query: 507 EEINEPGGKYIKMTGCGQGGRTVSVLVRGSSGAVVAEAARSLHDALCAV 361
EE G K I + GC + + V++L+RG + VV EA R++ DA+ V
Sbjct: 353 EEKKVAGDKMIFVEGC-KDPKAVTILIRGGTEHVVDEAERAIEDAIGVV 400
>UniRef50_A0DD79 Cluster: T-complex protein 1, delta subunit; n=13;
Eukaryota|Rep: T-complex protein 1, delta subunit -
Paramecium tetraurelia
Length = 706
Score = 42.3 bits (95), Expect = 0.012
Identities = 19/42 (45%), Positives = 29/42 (69%)
Frame = -3
Query: 483 KYIKMTGCGQGGRTVSVLVRGSSGAVVAEAARSLHDALCAVR 358
K +++T + +++LVRGS+ V+ EA RS+HDALC VR
Sbjct: 369 KVLRITKVPAQSKALTILVRGSNQLVLDEADRSIHDALCVVR 410
>UniRef50_Q8SSH3 Cluster: T COMPLEX PROTEIN 1 DELTA SUBUNIT; n=1;
Encephalitozoon cuniculi|Rep: T COMPLEX PROTEIN 1 DELTA
SUBUNIT - Encephalitozoon cuniculi
Length = 484
Score = 41.1 bits (92), Expect = 0.027
Identities = 21/41 (51%), Positives = 25/41 (60%)
Frame = -2
Query: 277 SRSTRSRSYCLRA*SDALEVIPSTLAENAGLNPIETVTELR 155
S ST Y LR + A E +P LA NAGL P+E V+ELR
Sbjct: 385 SESTEGNIYVLREIAKAFEGVPYFLARNAGLYPVEIVSELR 425
Score = 38.7 bits (86), Expect = 0.15
Identities = 17/33 (51%), Positives = 23/33 (69%)
Frame = -3
Query: 450 GRTVSVLVRGSSGAVVAEAARSLHDALCAVRCV 352
G ++L+RG VV EA RSL+DALC V+C+
Sbjct: 331 GYGCTILLRGCDDMVVEEAERSLNDALCVVKCL 363
>UniRef50_Q8THU8 Cluster: Hsp60; n=4; Archaea|Rep: Hsp60 -
Methanosarcina acetivorans
Length = 543
Score = 41.1 bits (92), Expect = 0.027
Identities = 17/27 (62%), Positives = 24/27 (88%)
Frame = -2
Query: 235 SDALEVIPSTLAENAGLNPIETVTELR 155
+++LEVIP TLAENAGL+PI+ + E+R
Sbjct: 439 AESLEVIPQTLAENAGLDPIDMLVEMR 465
Score = 33.1 bits (72), Expect = 7.3
Identities = 19/49 (38%), Positives = 28/49 (57%)
Frame = -3
Query: 507 EEINEPGGKYIKMTGCGQGGRTVSVLVRGSSGAVVAEAARSLHDALCAV 361
EE + G + +TGC + +T S+L+RG + VV R+L DAL V
Sbjct: 349 EEKDVTGSRMTFVTGC-KDSKTTSILLRGGTEHVVDGLERALEDALRVV 396
>UniRef50_A2XJL6 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (indica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. indica
(Rice)
Length = 449
Score = 40.7 bits (91), Expect = 0.036
Identities = 23/57 (40%), Positives = 32/57 (56%)
Frame = -3
Query: 531 KFSQC*FGEEINEPGGKYIKMTGCGQGGRTVSVLVRGSSGAVVAEAARSLHDALCAV 361
K C EEI K I +G G + ++++RG+S V+ EA RSLHDALC +
Sbjct: 259 KLGHCNVIEEIMIGEDKLIHFSGVAMG-QACTIVLRGASEHVLDEAERSLHDALCVL 314
Score = 35.1 bits (77), Expect = 1.8
Identities = 15/35 (42%), Positives = 26/35 (74%)
Frame = -2
Query: 259 RSYCLRA*SDALEVIPSTLAENAGLNPIETVTELR 155
+S+ + A S AL+ IP+ +A+NAGL+ E +++LR
Sbjct: 349 KSHAIDAFSRALQAIPTIIADNAGLDSAELISQLR 383
>UniRef50_Q9V2Q7 Cluster: Thermosome subunit; n=20;
Euryarchaeota|Rep: Thermosome subunit - Pyrococcus
abyssi
Length = 550
Score = 40.7 bits (91), Expect = 0.036
Identities = 18/30 (60%), Positives = 26/30 (86%)
Frame = -2
Query: 247 LRA*SDALEVIPSTLAENAGLNPIETVTEL 158
+ A ++AL+VIP TLAENAGL+PIET+ ++
Sbjct: 437 IEAFAEALKVIPRTLAENAGLDPIETLVKV 466
>UniRef50_A6S086 Cluster: Putative uncharacterized protein; n=1;
Botryotinia fuckeliana B05.10|Rep: Putative
uncharacterized protein - Botryotinia fuckeliana B05.10
Length = 444
Score = 40.3 bits (90), Expect = 0.048
Identities = 18/40 (45%), Positives = 27/40 (67%)
Frame = -2
Query: 274 RSTRSRSYCLRA*SDALEVIPSTLAENAGLNPIETVTELR 155
+S Y +RA +DAL+ IP LAEN+GL+ IET+ ++
Sbjct: 340 KSPGLEQYAMRAFADALDAIPMALAENSGLSSIETLASVK 379
Score = 33.1 bits (72), Expect = 7.3
Identities = 14/26 (53%), Positives = 19/26 (73%)
Frame = -3
Query: 435 VLVRGSSGAVVAEAARSLHDALCAVR 358
+L++ A++ EA RSLHDALC VR
Sbjct: 286 LLLQSQLPAIIDEAKRSLHDALCVVR 311
>UniRef50_Q12UN6 Cluster: Thermosome subunit, group II chaperonin;
n=1; Methanococcoides burtonii DSM 6242|Rep: Thermosome
subunit, group II chaperonin - Methanococcoides burtonii
(strain DSM 6242)
Length = 500
Score = 40.3 bits (90), Expect = 0.048
Identities = 18/27 (66%), Positives = 23/27 (85%)
Frame = -2
Query: 235 SDALEVIPSTLAENAGLNPIETVTELR 155
++ALEVIP LAENAGL+PI+ + ELR
Sbjct: 392 AEALEVIPVALAENAGLDPIDIMVELR 418
>UniRef50_Q99832 Cluster: T-complex protein 1 subunit eta; n=135;
Eukaryota|Rep: T-complex protein 1 subunit eta - Homo
sapiens (Human)
Length = 543
Score = 40.3 bits (90), Expect = 0.048
Identities = 22/64 (34%), Positives = 34/64 (53%)
Frame = -3
Query: 549 NHFTANKFSQC*FGEEINEPGGKYIKMTGCGQGGRTVSVLVRGSSGAVVAEAARSLHDAL 370
N +A+ +C EE G +Y TGC + +T + ++RG + + E RSLHDA+
Sbjct: 335 NALSADVLGRCQVFEETQIGGERYNFFTGCPKA-KTCTFILRGGAEQFMEETERSLHDAI 393
Query: 369 CAVR 358
VR
Sbjct: 394 MIVR 397
>UniRef50_Q1VNP5 Cluster: HSP60 family chaperonin; n=1;
Psychroflexus torquis ATCC 700755|Rep: HSP60 family
chaperonin - Psychroflexus torquis ATCC 700755
Length = 131
Score = 39.1 bits (87), Expect = 0.11
Identities = 17/31 (54%), Positives = 25/31 (80%)
Frame = -2
Query: 247 LRA*SDALEVIPSTLAENAGLNPIETVTELR 155
+ A +DALEVIP+T+AENAG +P++ + LR
Sbjct: 41 INAFADALEVIPATIAENAGHDPLDCLLSLR 71
>UniRef50_O30560 Cluster: Thermosome subunit 2; n=8;
Euryarchaeota|Rep: Thermosome subunit 2 - Halobacterium
volcanii (Haloferax volcanii)
Length = 557
Score = 39.1 bits (87), Expect = 0.11
Identities = 17/31 (54%), Positives = 25/31 (80%)
Frame = -2
Query: 247 LRA*SDALEVIPSTLAENAGLNPIETVTELR 155
+ A +DALE++P LAENAGL+ I+T+ +LR
Sbjct: 438 VEAYADALELVPRVLAENAGLDSIDTLVDLR 468
>UniRef50_Q1VIJ2 Cluster: Thermosome subunit 1; n=1; Psychroflexus
torquis ATCC 700755|Rep: Thermosome subunit 1 -
Psychroflexus torquis ATCC 700755
Length = 294
Score = 38.7 bits (86), Expect = 0.15
Identities = 17/30 (56%), Positives = 24/30 (80%)
Frame = -2
Query: 247 LRA*SDALEVIPSTLAENAGLNPIETVTEL 158
+ A +DALEVIP LAENAGL+PI+ + ++
Sbjct: 182 IEAFADALEVIPRALAENAGLDPIDALLDV 211
>UniRef50_Q4N0D4 Cluster: T-complex protein 1, eta subunit,
putative; n=2; Theileria|Rep: T-complex protein 1, eta
subunit, putative - Theileria parva
Length = 579
Score = 38.7 bits (86), Expect = 0.15
Identities = 19/64 (29%), Positives = 33/64 (51%)
Frame = -3
Query: 549 NHFTANKFSQC*FGEEINEPGGKYIKMTGCGQGGRTVSVLVRGSSGAVVAEAARSLHDAL 370
N+ + + C EE+ +Y T C + +T ++++RG + E+ RSLHDA+
Sbjct: 337 NNLSVDVLGTCGVFEEVQIGSERYNMFTDC-KSAKTCTIVLRGGGQQFIDESERSLHDAI 395
Query: 369 CAVR 358
VR
Sbjct: 396 MIVR 399
>UniRef50_P78371 Cluster: T-complex protein 1 subunit beta; n=145;
Eukaryota|Rep: T-complex protein 1 subunit beta - Homo
sapiens (Human)
Length = 535
Score = 38.7 bits (86), Expect = 0.15
Identities = 21/64 (32%), Positives = 34/64 (53%)
Frame = -3
Query: 552 WNHFTANKFSQC*FGEEINEPGGKYIKMTGCGQGGRTVSVLVRGSSGAVVAEAARSLHDA 373
++H K C EE+ K I +G G ++++RG++ ++ EA RSLHDA
Sbjct: 335 FDHPELVKLGSCKLIEEVMIGEDKLIHFSGVALG-EACTIVLRGATQQILDEAERSLHDA 393
Query: 372 LCAV 361
LC +
Sbjct: 394 LCVL 397
>UniRef50_Q7R1S9 Cluster: GLP_190_44957_46648; n=2; Giardia
intestinalis|Rep: GLP_190_44957_46648 - Giardia lamblia
ATCC 50803
Length = 563
Score = 38.3 bits (85), Expect = 0.19
Identities = 21/60 (35%), Positives = 33/60 (55%)
Frame = -2
Query: 277 SRSTRSRSYCLRA*SDALEVIPSTLAENAGLNPIETVTELRGLTLLALAVAPVSTYAADE 98
S+ + Y + A ++ALEV+P LAE AGL E +TE++ + + V+ ADE
Sbjct: 444 SKEPGLQQYSMHAYAEALEVVPRLLAETAGLPADEVMTEMQSRHVQGVDYTGVNIDGADE 503
>UniRef50_Q9HNI0 Cluster: Thermosome subunit beta; n=13;
Euryarchaeota|Rep: Thermosome subunit beta -
Halobacterium salinarium (Halobacterium halobium)
Length = 556
Score = 38.3 bits (85), Expect = 0.19
Identities = 19/43 (44%), Positives = 29/43 (67%), Gaps = 1/43 (2%)
Frame = -2
Query: 280 FSRSTRSRSY-CLRA*SDALEVIPSTLAENAGLNPIETVTELR 155
F+ S R + A +D+LE++P LAENAGL+ I+T+ +LR
Sbjct: 427 FADSVSGREQLAVEAFADSLELVPRVLAENAGLDSIDTLVDLR 469
>UniRef50_Q9HHA2 Cluster: Thermosome subunit 3; n=5; root|Rep:
Thermosome subunit 3 - Halobacterium volcanii (Haloferax
volcanii)
Length = 524
Score = 38.3 bits (85), Expect = 0.19
Identities = 15/35 (42%), Positives = 25/35 (71%)
Frame = -2
Query: 259 RSYCLRA*SDALEVIPSTLAENAGLNPIETVTELR 155
+ + A +DA+E +P TLAEN G++PI+ + +LR
Sbjct: 431 KQLAVEAYADAVEALPRTLAENTGMDPIDALVDLR 465
>UniRef50_A7PYP3 Cluster: Chromosome chr12 scaffold_38, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr12 scaffold_38, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 392
Score = 37.5 bits (83), Expect = 0.34
Identities = 18/33 (54%), Positives = 23/33 (69%)
Frame = -2
Query: 253 YCLRA*SDALEVIPSTLAENAGLNPIETVTELR 155
Y +RA DAL+ IP LAEN+GL IET+ +R
Sbjct: 212 YAIRAFGDALDSIPMMLAENSGLRLIETLLAVR 244
>UniRef50_Q98S92 Cluster: T-complex protein1 eta SU; n=1; Guillardia
theta|Rep: T-complex protein1 eta SU - Guillardia theta
(Cryptomonas phi)
Length = 512
Score = 37.1 bits (82), Expect = 0.45
Identities = 16/40 (40%), Positives = 25/40 (62%)
Frame = -2
Query: 268 TRSRSYCLRA*SDALEVIPSTLAENAGLNPIETVTELRGL 149
T + Y + S E+IP TL EN+G++P+E + +LR L
Sbjct: 419 TGTDQYIVSKLSKVFEIIPKTLIENSGMDPLEIIAKLRKL 458
>UniRef50_Q2FPE0 Cluster: Chaperonin Cpn60/TCP-1; n=4;
Methanomicrobiales|Rep: Chaperonin Cpn60/TCP-1 -
Methanospirillum hungatei (strain JF-1 / DSM 864)
Length = 532
Score = 36.7 bits (81), Expect = 0.59
Identities = 16/31 (51%), Positives = 22/31 (70%)
Frame = -2
Query: 247 LRA*SDALEVIPSTLAENAGLNPIETVTELR 155
+ A +DA IP TLAEN+G NPI+ + EL+
Sbjct: 433 IEAYADAFAAIPITLAENSGYNPIDKLVELK 463
>UniRef50_A7PW56 Cluster: Chromosome chr8 scaffold_34, whole genome
shotgun sequence; n=8; Eukaryota|Rep: Chromosome chr8
scaffold_34, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 545
Score = 36.3 bits (80), Expect = 0.78
Identities = 15/39 (38%), Positives = 25/39 (64%)
Frame = -2
Query: 274 RSTRSRSYCLRA*SDALEVIPSTLAENAGLNPIETVTEL 158
+ T Y + +++ E++P TLAENAGLN +E ++ L
Sbjct: 431 KETGLDQYAIAKFAESFEMVPKTLAENAGLNAMEIISSL 469
>UniRef50_A7D1F1 Cluster: Chaperonin Cpn60/TCP-1; n=1; Halorubrum
lacusprofundi ATCC 49239|Rep: Chaperonin Cpn60/TCP-1 -
Halorubrum lacusprofundi ATCC 49239
Length = 564
Score = 36.3 bits (80), Expect = 0.78
Identities = 17/31 (54%), Positives = 22/31 (70%)
Frame = -2
Query: 247 LRA*SDALEVIPSTLAENAGLNPIETVTELR 155
L A +DA+ VIP TLA NAG +PI+ + LR
Sbjct: 426 LEAFADAVTVIPRTLARNAGADPIDALAALR 456
>UniRef50_Q3ILY6 Cluster: Thermosome subunit 4; n=1; Natronomonas
pharaonis DSM 2160|Rep: Thermosome subunit 4 -
Natronomonas pharaonis (strain DSM 2160 / ATCC 35678)
Length = 548
Score = 35.9 bits (79), Expect = 1.0
Identities = 15/31 (48%), Positives = 23/31 (74%)
Frame = -2
Query: 247 LRA*SDALEVIPSTLAENAGLNPIETVTELR 155
+ A +DALE +P LA+NAG +P+ T+ EL+
Sbjct: 423 IEAYADALETLPQALAKNAGRDPMATLAELK 453
>UniRef50_Q7QZG3 Cluster: GLP_159_66836_65142; n=2; Giardia
intestinalis|Rep: GLP_159_66836_65142 - Giardia lamblia
ATCC 50803
Length = 564
Score = 35.1 bits (77), Expect = 1.8
Identities = 16/31 (51%), Positives = 23/31 (74%)
Frame = -2
Query: 247 LRA*SDALEVIPSTLAENAGLNPIETVTELR 155
++A + +LEVIP TL +N G N I T+TEL+
Sbjct: 471 IKAVAKSLEVIPRTLLQNCGGNIIRTITELK 501
>UniRef50_Q8Q0R4 Cluster: Thermosome subunit; n=4;
Methanosarcinaceae|Rep: Thermosome subunit -
Methanosarcina mazei (Methanosarcina frisia)
Length = 567
Score = 35.1 bits (77), Expect = 1.8
Identities = 16/31 (51%), Positives = 22/31 (70%)
Frame = -2
Query: 247 LRA*SDALEVIPSTLAENAGLNPIETVTELR 155
+ A ++ALE IP T+A NAGL+ I T+ LR
Sbjct: 452 IAAFAEALEEIPRTIARNAGLDTINTIVNLR 482
>UniRef50_Q5V6S3 Cluster: Thermosome alpha subunit; n=1; Haloarcula
marismortui|Rep: Thermosome alpha subunit - Haloarcula
marismortui (Halobacterium marismortui)
Length = 538
Score = 35.1 bits (77), Expect = 1.8
Identities = 14/25 (56%), Positives = 20/25 (80%)
Frame = -2
Query: 229 ALEVIPSTLAENAGLNPIETVTELR 155
ALE +P TLA NAG +P+ T+TE++
Sbjct: 431 ALEALPRTLATNAGTDPLTTLTEIK 455
>UniRef50_O24734 Cluster: Thermosome subunit alpha; n=24;
Thermoprotei|Rep: Thermosome subunit alpha - Sulfolobus
tokodaii
Length = 559
Score = 35.1 bits (77), Expect = 1.8
Identities = 15/27 (55%), Positives = 21/27 (77%)
Frame = -2
Query: 235 SDALEVIPSTLAENAGLNPIETVTELR 155
++ALE IP LAE AG+ PI+T+ +LR
Sbjct: 447 AEALEEIPMILAETAGMEPIQTLMDLR 473
>UniRef50_O81503 Cluster: F9D12.18 protein; n=16; Eukaryota|Rep:
F9D12.18 protein - Arabidopsis thaliana (Mouse-ear
cress)
Length = 562
Score = 34.7 bits (76), Expect = 2.4
Identities = 15/26 (57%), Positives = 19/26 (73%)
Frame = -2
Query: 229 ALEVIPSTLAENAGLNPIETVTELRG 152
A E IP TLA+N G+N I T+T L+G
Sbjct: 450 AFEAIPRTLAQNCGVNVIRTMTALQG 475
>UniRef50_Q2NHT5 Cluster: ThsA; n=1; Methanosphaera stadtmanae DSM
3091|Rep: ThsA - Methanosphaera stadtmanae (strain DSM
3091)
Length = 535
Score = 34.3 bits (75), Expect = 3.1
Identities = 15/40 (37%), Positives = 27/40 (67%)
Frame = -2
Query: 277 SRSTRSRSYCLRA*SDALEVIPSTLAENAGLNPIETVTEL 158
++ T ++A +DALE +P LA+NAG++ I+ +T+L
Sbjct: 421 NKFTDKEQLVIKAYADALEQLPVALAKNAGMDTIDVLTKL 460
>UniRef50_UPI000069E986 Cluster: Multiple epidermal growth factor-like
domains 6 precursor (EGF-like domain-containing protein
3) (Multiple EGF-like domain protein 3).; n=5;
Tetrapoda|Rep: Multiple epidermal growth factor-like
domains 6 precursor (EGF-like domain-containing protein
3) (Multiple EGF-like domain protein 3). - Xenopus
tropicalis
Length = 1521
Score = 33.9 bits (74), Expect = 4.2
Identities = 22/51 (43%), Positives = 26/51 (50%)
Frame = +1
Query: 265 GCCERSTRETGRRCSLGSAAAGQQCRAARHTAHGT*GVVKRSRCLCHHGAT 417
G CER ETGR C + G+ C+ A GT GV RC C HGA+
Sbjct: 1068 GVCER---ETGR-CLCHAGWIGELCQTA--CPAGTFGVKCAERCKCRHGAS 1112
>UniRef50_Q98S00 Cluster: T-complex protein1, epsilon-SU; n=1;
Guillardia theta|Rep: T-complex protein1, epsilon-SU -
Guillardia theta (Cryptomonas phi)
Length = 511
Score = 33.9 bits (74), Expect = 4.2
Identities = 17/42 (40%), Positives = 25/42 (59%)
Frame = -3
Query: 483 KYIKMTGCGQGGRTVSVLVRGSSGAVVAEAARSLHDALCAVR 358
K I C + VS+L+RG S V+ EA RS+ D++ A+R
Sbjct: 345 KMIIFENCARSN-CVSILLRGGSDFVIQEAKRSIRDSMWAIR 385
Score = 32.7 bits (71), Expect = 9.6
Identities = 15/39 (38%), Positives = 26/39 (66%)
Frame = -2
Query: 280 FSRSTRSRSYCLRA*SDALEVIPSTLAENAGLNPIETVT 164
F+ + ++ +A S AL+ I TLA+NAG NP++T++
Sbjct: 412 FNDNNSLKNMVFKAYSLALKSITKTLAQNAGKNPLQTIS 450
>UniRef50_Q7QR58 Cluster: GLP_301_27994_26207; n=3; Eukaryota|Rep:
GLP_301_27994_26207 - Giardia lamblia ATCC 50803
Length = 595
Score = 33.9 bits (74), Expect = 4.2
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = -3
Query: 444 TVSVLVRGSSGAVVAEAARSLHDALCAVR 358
T + ++RG + + E+ RSLHDA+C VR
Sbjct: 392 TCTFILRGGADQFIQESERSLHDAICVVR 420
>UniRef50_A2FL92 Cluster: TCP-1/cpn60 chaperonin family protein;
n=3; Trichomonas vaginalis G3|Rep: TCP-1/cpn60
chaperonin family protein - Trichomonas vaginalis G3
Length = 537
Score = 33.9 bits (74), Expect = 4.2
Identities = 15/33 (45%), Positives = 24/33 (72%)
Frame = -2
Query: 253 YCLRA*SDALEVIPSTLAENAGLNPIETVTELR 155
Y +R ++ALEVIP T+AEN+G+ E + ++R
Sbjct: 431 YGIRKFAEALEVIPRTIAENSGIRISEFMAKIR 463
>UniRef50_Q8SQP2 Cluster: T COMPLEX PROTEIN 1 BETA SUBUNIT; n=1;
Encephalitozoon cuniculi|Rep: T COMPLEX PROTEIN 1 BETA
SUBUNIT - Encephalitozoon cuniculi
Length = 508
Score = 33.9 bits (74), Expect = 4.2
Identities = 17/41 (41%), Positives = 26/41 (63%)
Frame = -3
Query: 483 KYIKMTGCGQGGRTVSVLVRGSSGAVVAEAARSLHDALCAV 361
+ IK +G G T+ ++ GSS ++ EA RS+HDALC +
Sbjct: 336 RMIKFSGVRSGASTI--VLCGSSKEMLDEAERSVHDALCVL 374
>UniRef50_Q9N358 Cluster: T-complex protein 1 subunit theta; n=1;
Caenorhabditis elegans|Rep: T-complex protein 1 subunit
theta - Caenorhabditis elegans
Length = 581
Score = 33.9 bits (74), Expect = 4.2
Identities = 14/32 (43%), Positives = 22/32 (68%)
Frame = -2
Query: 253 YCLRA*SDALEVIPSTLAENAGLNPIETVTEL 158
Y ++ + ALE +P +AENAG+ ET+T+L
Sbjct: 469 YAIKKFAHALETLPKAIAENAGMPTTETLTKL 500
>UniRef50_UPI000049A5F1 Cluster: T-complex protein 1 theta subunit;
n=3; Entamoeba histolytica HM-1:IMSS|Rep: T-complex
protein 1 theta subunit - Entamoeba histolytica
HM-1:IMSS
Length = 514
Score = 33.5 bits (73), Expect = 5.5
Identities = 13/34 (38%), Positives = 24/34 (70%)
Frame = -2
Query: 259 RSYCLRA*SDALEVIPSTLAENAGLNPIETVTEL 158
+ Y ++ ++A +++P LAENAGL+ E ++EL
Sbjct: 399 KQYSIKKYAEAFQMVPRVLAENAGLDATEILSEL 432
>UniRef50_Q4T337 Cluster: Chromosome undetermined SCAF10125, whole
genome shotgun sequence; n=3; Tetraodontidae|Rep:
Chromosome undetermined SCAF10125, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 585
Score = 33.5 bits (73), Expect = 5.5
Identities = 16/30 (53%), Positives = 20/30 (66%)
Frame = -2
Query: 244 RA*SDALEVIPSTLAENAGLNPIETVTELR 155
RA + ALEVIP TL +N G + I +T LR
Sbjct: 485 RAVAQALEVIPRTLIQNCGASTIRVLTSLR 514
>UniRef50_Q4SUF2 Cluster: Chromosome undetermined SCAF13960, whole
genome shotgun sequence; n=5; Euteleostomi|Rep:
Chromosome undetermined SCAF13960, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 768
Score = 33.5 bits (73), Expect = 5.5
Identities = 27/94 (28%), Positives = 40/94 (42%), Gaps = 4/94 (4%)
Frame = -2
Query: 283 CFSRSTRSRSYCLRA*SDALEVIPSTLAENAGLNPIETVTELR---GLTLLALAVAPVST 113
C R RS S+CL ++PS A + + +TE+ G T + L VA
Sbjct: 91 CKERRRRSSSFCLLGRGVTFRLLPSQKAFPRYESALAIMTEIGNRLGQTQVYLGVAKCWL 150
Query: 112 YAADELQICARSMCCNRFM-LQLPRSHSQPKLCV 14
+ ++ + R L LPR H+ P LCV
Sbjct: 151 LQKEFEKVAGTAGASERTRALPLPRMHASPPLCV 184
>UniRef50_Q4S6V3 Cluster: T-complex protein 1, alpha subunit; n=3;
Euteleostomi|Rep: T-complex protein 1, alpha subunit -
Tetraodon nigroviridis (Green puffer)
Length = 532
Score = 33.5 bits (73), Expect = 5.5
Identities = 14/31 (45%), Positives = 22/31 (70%)
Frame = -3
Query: 444 TVSVLVRGSSGAVVAEAARSLHDALCAVRCV 352
+ S+++RG++ + E RSLHDALC V+ V
Sbjct: 351 SASIILRGANDFMCDEMERSLHDALCVVKRV 381
>UniRef50_Q98S23 Cluster: T-complex protein 1 beta SU; n=1;
Guillardia theta|Rep: T-complex protein 1 beta SU -
Guillardia theta (Cryptomonas phi)
Length = 500
Score = 33.5 bits (73), Expect = 5.5
Identities = 15/49 (30%), Positives = 30/49 (61%)
Frame = -3
Query: 507 EEINEPGGKYIKMTGCGQGGRTVSVLVRGSSGAVVAEAARSLHDALCAV 361
EEI+ +++ +G G ++++RGS+ ++ EA R+L+D LC +
Sbjct: 327 EEISIGSKNFVRFSGFENNG-IGTIVIRGSTDEILDEAERALNDTLCVL 374
>UniRef50_Q8SR53 Cluster: T COMPLEX PROTEIN 1 ETA SUBUNIT; n=1;
Encephalitozoon cuniculi|Rep: T COMPLEX PROTEIN 1 ETA
SUBUNIT - Encephalitozoon cuniculi
Length = 511
Score = 33.5 bits (73), Expect = 5.5
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = -3
Query: 459 GQGGRTVSVLVRGSSGAVVAEAARSLHDALCAVR 358
G G ++++RG V+ E RS+HDA+C VR
Sbjct: 351 GGGTSACTMILRGPGQEVLEEIGRSVHDAVCVVR 384
>UniRef50_Q8THX2 Cluster: Hsp60; n=2; Methanosarcina
acetivorans|Rep: Hsp60 - Methanosarcina acetivorans
Length = 535
Score = 33.5 bits (73), Expect = 5.5
Identities = 15/38 (39%), Positives = 24/38 (63%)
Frame = -2
Query: 268 TRSRSYCLRA*SDALEVIPSTLAENAGLNPIETVTELR 155
T R ++A ++ALE IP LA N G+N I+ + ++R
Sbjct: 443 TGKRQLAVQAYAEALEKIPVILARNIGMNEIDAMAQMR 480
>UniRef50_P17987 Cluster: T-complex protein 1 subunit alpha; n=218;
root|Rep: T-complex protein 1 subunit alpha - Homo
sapiens (Human)
Length = 556
Score = 33.5 bits (73), Expect = 5.5
Identities = 14/31 (45%), Positives = 22/31 (70%)
Frame = -3
Query: 444 TVSVLVRGSSGAVVAEAARSLHDALCAVRCV 352
+ S+++RG++ + E RSLHDALC V+ V
Sbjct: 372 SASIILRGANDFMCDEMERSLHDALCVVKRV 402
>UniRef50_Q0W8R0 Cluster: Chaperonin Hsp60; n=1; uncultured
methanogenic archaeon RC-I|Rep: Chaperonin Hsp60 -
Uncultured methanogenic archaeon RC-I
Length = 536
Score = 33.1 bits (72), Expect = 7.3
Identities = 14/27 (51%), Positives = 20/27 (74%)
Frame = -2
Query: 235 SDALEVIPSTLAENAGLNPIETVTELR 155
+ A+EVIP LA NAGL+PI+ + L+
Sbjct: 441 ASAMEVIPKALATNAGLSPIDMMIALK 467
>UniRef50_P49368 Cluster: T-complex protein 1 subunit gamma; n=142;
Eukaryota|Rep: T-complex protein 1 subunit gamma - Homo
sapiens (Human)
Length = 545
Score = 33.1 bits (72), Expect = 7.3
Identities = 16/30 (53%), Positives = 20/30 (66%)
Frame = -2
Query: 244 RA*SDALEVIPSTLAENAGLNPIETVTELR 155
RA + ALEVIP TL +N G + I +T LR
Sbjct: 438 RAVAQALEVIPRTLIQNCGASTIRLLTSLR 467
>UniRef50_A6GGX9 Cluster: Putative uncharacterized protein; n=1;
Plesiocystis pacifica SIR-1|Rep: Putative
uncharacterized protein - Plesiocystis pacifica SIR-1
Length = 333
Score = 32.7 bits (71), Expect = 9.6
Identities = 15/41 (36%), Positives = 18/41 (43%)
Frame = -1
Query: 434 YWFADRVAPWWQRQRDLFTTPYVPCAVWRAALHCWPAAALP 312
Y F+ R + WW R +FTT Y A W ALP
Sbjct: 5 YRFSFRASVWWTRHSIVFTTVYASAVACLAFFSGWSWVALP 45
>UniRef50_Q9V2S9 Cluster: Thermosome subunit alpha; n=34;
Archaea|Rep: Thermosome subunit alpha - Sulfolobus
solfataricus
Length = 559
Score = 32.7 bits (71), Expect = 9.6
Identities = 18/43 (41%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Frame = -2
Query: 280 FSRSTRSRSY-CLRA*SDALEVIPSTLAENAGLNPIETVTELR 155
++RS + + A +DALE IP LAE AGL I ++ +LR
Sbjct: 430 YARSVGGKEQLAIEAFADALEEIPLILAETAGLEAISSLMDLR 472
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 664,542,999
Number of Sequences: 1657284
Number of extensions: 12771635
Number of successful extensions: 35708
Number of sequences better than 10.0: 53
Number of HSP's better than 10.0 without gapping: 34415
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35691
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 59677054775
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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