Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40077
(816 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g56340.1 68414.m06476 calreticulin 1 (CRT1) identical to calr... 134 7e-32
At1g09210.1 68414.m01028 calreticulin 2 (CRT2) identical to SP|Q... 129 2e-30
At1g08450.1 68414.m00934 calreticulin 3 (CRT3) identical to simi... 112 2e-25
At1g08450.2 68414.m00935 calreticulin 3 (CRT3) identical to simi... 68 9e-12
At5g61790.1 68418.m07754 calnexin 1 (CNX1) identical to calnexin... 59 4e-09
At5g07340.1 68418.m00838 calnexin, putative identical to calnexi... 56 3e-08
At5g56820.1 68418.m07090 F-box family protein contains F-box dom... 33 0.17
At5g55810.1 68418.m06955 nicotinamide-nucleotide adenylyltransfe... 32 0.40
At1g74170.1 68414.m08590 leucine-rich repeat family protein cont... 31 0.91
At1g74190.1 68414.m08592 leucine-rich repeat family protein cont... 30 1.6
At2g15695.1 68415.m01797 expressed protein contains Pfam PF05705... 30 2.1
At1g60890.1 68414.m06855 phosphatidylinositol-4-phosphate 5-kina... 29 3.7
At3g02885.1 68416.m00283 gibberellin-regulated protein 5 (GASA5)... 29 4.9
At5g22690.1 68418.m02651 disease resistance protein (TIR-NBS-LRR... 28 6.4
At1g67180.1 68414.m07642 zinc finger (C3HC4-type RING finger) fa... 28 6.4
At5g35210.2 68418.m04175 peptidase M50 family protein / sterol-r... 28 8.5
At5g35210.1 68418.m04174 peptidase M50 family protein / sterol-r... 28 8.5
>At1g56340.1 68414.m06476 calreticulin 1 (CRT1) identical to
calreticulin (crt1) GI:2052379 [Arabidopsis thaliana]
Length = 425
Score = 134 bits (324), Expect = 7e-32
Identities = 80/187 (42%), Positives = 100/187 (53%), Gaps = 1/187 (0%)
Frame = +1
Query: 172 WKV*IDCWKVLQRPRG*QRFENL*RCEVYALSRKFKPFSNEGKPLVVQFTVKHEQDIDCG 351
WK W +G Q E+ YA+S +F FSN+ K LV QF+VKHEQ +DCG
Sbjct: 53 WKHTAGNWSGDANDKGIQTSEDY---RFYAISAEFPEFSNKDKTLVFQFSVKHEQKLDCG 109
Query: 352 GGYLKVFDCKLEQKDMHGETPYEIMFGPDICGPGTKKVHVIFSYKGKNHLIKK-ISAAKM 528
GGY+K+ ++Q G+TPY IMFGPDICG TKKVH I +Y G NHLIKK +
Sbjct: 110 GGYMKLLSDDVDQTKFGGDTPYSIMFGPDICGYSTKKVHAILTYNGTNHLIKKEVPCETD 169
Query: 529 MSTHICTL*L*NLTTPMKSSLTMRKLNLGDLEADWGLPSA*RKSRDPESPGNPKTWG*QS 708
TH+ T L T + K G L +DW L A +K +DP S P+ W
Sbjct: 170 QLTHVYTFVLRPDATYSILIDNVEK-QTGSLYSDWDLLPA-KKIKDP-SAKKPEDWD-DK 225
Query: 709 PLFPDPE 729
PDPE
Sbjct: 226 EYIPDPE 232
Score = 49.2 bits (112), Expect = 3e-06
Identities = 26/59 (44%), Positives = 37/59 (62%), Gaps = 2/59 (3%)
Frame = +2
Query: 83 INCDVFFEEKFPDDSWESNWVYSE--HPGKEFGKFKLTAGKFFSDPEDDKGLKTSEDAR 253
++ +V FEEKF +D WE WV S+ G++K TAG + D +DKG++TSED R
Sbjct: 20 VSAEVIFEEKF-EDGWEKRWVKSDWKKDDNTAGEWKHTAGNWSGD-ANDKGIQTSEDYR 76
>At1g09210.1 68414.m01028 calreticulin 2 (CRT2) identical to
SP|Q38858 Calreticulin 2 precursor {Arabidopsis
thaliana}
Length = 424
Score = 129 bits (312), Expect = 2e-30
Identities = 78/190 (41%), Positives = 101/190 (53%), Gaps = 1/190 (0%)
Frame = +1
Query: 172 WKV*IDCWKVLQRPRG*QRFENL*RCEVYALSRKFKPFSNEGKPLVVQFTVKHEQDIDCG 351
WK W +G Q E+ YA+S +F FSN+ K LV QF+VKHEQ +DCG
Sbjct: 53 WKHTAGNWSGDANDKGIQTSEDY---RFYAISAEFPEFSNKDKTLVFQFSVKHEQKLDCG 109
Query: 352 GGYLKVFDCKLEQKDMHGETPYEIMFGPDICGPGTKKVHVIFSYKGKNHLIKK-ISAAKM 528
GGY+K+ ++QK G+TPY IMFGPDICG TKKVH I +Y NHLIKK +
Sbjct: 110 GGYMKLLSGDVDQKKFGGDTPYSIMFGPDICGYSTKKVHAILTYNEANHLIKKDVPCETD 169
Query: 529 MSTHICTL*L*NLTTPMKSSLTMRKLNLGDLEADWGLPSA*RKSRDPESPGNPKTWG*QS 708
TH+ T L T + K G L +DW L +K +DP S P+ W +
Sbjct: 170 QLTHVYTFILRPDATYSILIDNVEK-QTGSLYSDWDLLPP-KKIKDP-SAKKPEDWD-EQ 225
Query: 709 PLFPDPEGQE 738
DPE ++
Sbjct: 226 EYISDPEDKK 235
Score = 48.8 bits (111), Expect = 4e-06
Identities = 27/55 (49%), Positives = 35/55 (63%), Gaps = 2/55 (3%)
Frame = +2
Query: 95 VFFEEKFPDDSWESNWVYSE--HPGKEFGKFKLTAGKFFSDPEDDKGLKTSEDAR 253
V FEE+F DD WE+ WV SE G++K TAG + D +DKG++TSED R
Sbjct: 24 VIFEERF-DDGWENRWVKSEWKKDDNTAGEWKHTAGNWSGD-ANDKGIQTSEDYR 76
>At1g08450.1 68414.m00934 calreticulin 3 (CRT3) identical to similar
to SP|O04153 Calreticulin 3 precursor {Arabidopsis
thaliana}
Length = 424
Score = 112 bits (270), Expect = 2e-25
Identities = 49/85 (57%), Positives = 64/85 (75%)
Frame = +1
Query: 256 YALSRKFKPFSNEGKPLVVQFTVKHEQDIDCGGGYLKVFDCKLEQKDMHGETPYEIMFGP 435
YA+S K FSN+ + LVVQ++VK EQDI+CGG Y+K+ + QK G+TPY +MFGP
Sbjct: 84 YAISAKIPEFSNKNRTLVVQYSVKIEQDIECGGAYIKLLSGYVNQKQFGGDTPYSLMFGP 143
Query: 436 DICGPGTKKVHVIFSYKGKNHLIKK 510
DICG TKK+HVI SY+G+N+ IKK
Sbjct: 144 DICGTQTKKLHVIVSYQGQNYPIKK 168
Score = 46.4 bits (105), Expect = 2e-05
Identities = 25/56 (44%), Positives = 35/56 (62%), Gaps = 2/56 (3%)
Frame = +2
Query: 92 DVFFEEKFPDDSWESNWVYSEHPGKE--FGKFKLTAGKFFSDPEDDKGLKTSEDAR 253
++F EE F + W+S WV S+ E G FK TAGK+ DP D+KG++T DA+
Sbjct: 29 EIFLEEHF-EGGWKSRWVLSDWKRNEGKAGTFKHTAGKWPGDP-DNKGIQTYNDAK 82
Score = 46.0 bits (104), Expect = 3e-05
Identities = 17/37 (45%), Positives = 27/37 (72%)
Frame = +3
Query: 504 QKDIRCKDDVYTHLYTLIVKPDNTYEVLIDNEKVESG 614
+KD++C+ D H YT I++PD +Y VL+DN++ E G
Sbjct: 167 KKDLQCETDKLNHFYTFILRPDASYSVLVDNKEREFG 203
>At1g08450.2 68414.m00935 calreticulin 3 (CRT3) identical to similar
to SP|O04153 Calreticulin 3 precursor {Arabidopsis
thaliana}
Length = 370
Score = 67.7 bits (158), Expect = 9e-12
Identities = 28/57 (49%), Positives = 40/57 (70%)
Frame = +1
Query: 256 YALSRKFKPFSNEGKPLVVQFTVKHEQDIDCGGGYLKVFDCKLEQKDMHGETPYEIM 426
YA+S K FSN+ + LVVQ++VK EQDI+CGG Y+K+ + QK G+TPY ++
Sbjct: 84 YAISAKIPEFSNKNRTLVVQYSVKIEQDIECGGAYIKLLSGYVNQKQFGGDTPYSVL 140
Score = 46.4 bits (105), Expect = 2e-05
Identities = 25/56 (44%), Positives = 35/56 (62%), Gaps = 2/56 (3%)
Frame = +2
Query: 92 DVFFEEKFPDDSWESNWVYSEHPGKE--FGKFKLTAGKFFSDPEDDKGLKTSEDAR 253
++F EE F + W+S WV S+ E G FK TAGK+ DP D+KG++T DA+
Sbjct: 29 EIFLEEHF-EGGWKSRWVLSDWKRNEGKAGTFKHTAGKWPGDP-DNKGIQTYNDAK 82
>At5g61790.1 68418.m07754 calnexin 1 (CNX1) identical to calnexin
homolog 1, Arabidopsis thaliana, EMBL:AT08315
[SP|P29402]
Length = 530
Score = 58.8 bits (136), Expect = 4e-09
Identities = 28/73 (38%), Positives = 43/73 (58%), Gaps = 3/73 (4%)
Frame = +1
Query: 277 KPFSNEGKPLVVQFTVKHEQDIDCGGGYLKVF---DCKLEQKDMHGETPYEIMFGPDICG 447
+P + + +V+Q+ V+ ++ ++CGG YLK + + E+PY IMFGPD CG
Sbjct: 85 EPLNLKEGTVVLQYEVRFQEGLECGGAYLKYLRPQEAGWTPQGFDSESPYSIMFGPDKCG 144
Query: 448 PGTKKVHVIFSYK 486
GT KVH I +K
Sbjct: 145 -GTNKVHFILKHK 156
Score = 33.5 bits (73), Expect = 0.17
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +3
Query: 528 DVYTHLYTLIVKPDNTYEVLIDNEK 602
D +H+YT I+KPDN +L+D E+
Sbjct: 177 DKLSHVYTAILKPDNEVRILVDGEE 201
>At5g07340.1 68418.m00838 calnexin, putative identical to calnexin
homolog 2 from Arabidopsis thaliana [SP|Q38798], strong
similarity to calnexin homolog 1, Arabidopsis thaliana,
EMBL:AT08315 [SP|P29402]; contains Pfam profile PF00262
calreticulin family
Length = 532
Score = 56.0 bits (129), Expect = 3e-08
Identities = 54/178 (30%), Positives = 82/178 (46%), Gaps = 13/178 (7%)
Frame = +1
Query: 289 NEGKPLVVQFTVKHEQDIDCGGGYLKVF---DCKLEQKDMHGETPYEIMFGPDICGPGTK 459
NEG +V+Q+ + ++ ++CGG YLK + + ++PY IMFGPD CG T
Sbjct: 92 NEGT-VVLQYEARFQEGLECGGAYLKYLRPQEAGWVPQGFDNDSPYSIMFGPDKCG-ATN 149
Query: 460 KVHVIFSYKG-------KNHLIKKISAAKMMSTHICTL*L--*NLTTPMKSSLTMRKLNL 612
KVH I +K ++HL S M +H+ T L N + +K NL
Sbjct: 150 KVHFILKHKNPKSGEFVEHHLKFPPSVPFDMLSHVYTAVLKSDNEVRILVDGEEKKKGNL 209
Query: 613 GDLEADWGLPSA*RKS-RDPESPGNPKTWG*QSPLFPDPEGQEA*XIWDKLYPIFFPD 783
E D+ P K+ DPE P+ W ++ + PDP + WD+ P+ D
Sbjct: 210 LSAE-DFEPPLIPSKTIPDPEDK-KPEDWDERAKI-PDPNAVKP-DDWDEDAPMEIED 263
Score = 33.1 bits (72), Expect = 0.23
Identities = 11/29 (37%), Positives = 20/29 (68%)
Frame = +3
Query: 528 DVYTHLYTLIVKPDNTYEVLIDNEKVESG 614
D+ +H+YT ++K DN +L+D E+ + G
Sbjct: 179 DMLSHVYTAVLKSDNEVRILVDGEEKKKG 207
>At5g56820.1 68418.m07090 F-box family protein contains F-box domain
Pfam:PF00646
Length = 435
Score = 33.5 bits (73), Expect = 0.17
Identities = 19/72 (26%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Frame = -1
Query: 210 SLKNFPAVNLNFPNSFPGC-SLYTQLLSHES-SGNFSSKNTSQFIEDNASKLTTTSTTAF 37
S+K+ P +++ PNS P C + + + L + +G K + +I NA +L T + + +
Sbjct: 332 SIKDQPNISVRKPNSVPECLTFHLETLEWQGYAGRPEDKEIAVYILGNALRLNTATISRY 391
Query: 36 IFDSQYHLLQQK 1
S++ Q+K
Sbjct: 392 FSSSRFRHHQKK 403
>At5g55810.1 68418.m06955 nicotinamide-nucleotide
adenylyltransferase, putative / NAD(+)
pyrophosphorylase, putative similar to nicotinamide
mononucleotide adenylyl transferase [Homo sapiens]
GI:11245478; contains Pfam profile PF01467:
Cytidylyltransferase
Length = 238
Score = 32.3 bits (70), Expect = 0.40
Identities = 25/77 (32%), Positives = 36/77 (46%), Gaps = 1/77 (1%)
Frame = +2
Query: 206 SDPEDDKGLKTSEDARSMLSPVSSNRSVMRVNPW*SSSLSNMNKTLTVEADTSRSLTANW 385
+D KGL ++E M + + + V+PW +S SN +TLTV + LT N
Sbjct: 64 NDAYKKKGLLSAEHRLEMCNVSCQSSDFVMVDPW-EASQSNYQRTLTVLSRVKTFLTTN- 121
Query: 386 SRRTCTERLH-MRLCSA 433
R E L M LC +
Sbjct: 122 -RHVPEESLKVMLLCGS 137
>At1g74170.1 68414.m08590 leucine-rich repeat family protein
contains leucine rich-repeat (LRR) domains Pfam:PF00560,
INTERPRO:IPR001611; similar to Cf-2.2 [Lycopersicon
pimpinellifolium] gi|1184077|gb|AAC15780
Length = 1068
Score = 31.1 bits (67), Expect = 0.91
Identities = 12/38 (31%), Positives = 19/38 (50%)
Frame = +1
Query: 310 VQFTVKHEQDIDCGGGYLKVFDCKLEQKDMHGETPYEI 423
++F KH D GG +F L + ++ GE P E+
Sbjct: 830 IEFATKHRYDAYMGGNLKLLFGMDLSENELSGEIPVEL 867
>At1g74190.1 68414.m08592 leucine-rich repeat family protein
contains leucine rich-repeat (LRR) domains Pfam:PF00560,
INTERPRO:IPR001611; contains similarity to Cf-2.1
[Lycopersicon pimpinellifolium] gi|1184075|gb|AAC15779
Length = 965
Score = 30.3 bits (65), Expect = 1.6
Identities = 12/37 (32%), Positives = 18/37 (48%)
Frame = +1
Query: 310 VQFTVKHEQDIDCGGGYLKVFDCKLEQKDMHGETPYE 420
++F KH D GG +F L + ++ GE P E
Sbjct: 762 IEFATKHRYDAYMGGNLKLLFGMDLSENELSGEIPVE 798
>At2g15695.1 68415.m01797 expressed protein contains Pfam PF05705:
Eukaryotic protein of unknown function (DUF829)
Length = 420
Score = 29.9 bits (64), Expect = 2.1
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = -2
Query: 398 MSFCSSLQSKTLRYPPPQSMSCSCLTVNWTTKGLPSLLNGLNL 270
+ F S L K +P + MS V+W KG+ S L+GL L
Sbjct: 147 LDFTSDLNVKFALHPTIRRMSGPSRLVSWVAKGISSGLDGLYL 189
>At1g60890.1 68414.m06855 phosphatidylinositol-4-phosphate 5-kinase
family protein similar to
phosphatidylinositol-4-phosphate 5-kinase AtPIP5K1
[Arabidopsis thaliana] GI:3702691; contains Pfam
profiles PF01504: Phosphatidylinositol-4-phosphate
5-Kinase, PF02493: MORN repeat
Length = 769
Score = 29.1 bits (62), Expect = 3.7
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = -1
Query: 138 LLSHESSGNFSSKNTSQFIEDNASKLTTTS 49
LLSH S+ N TS+ + + S+LTTTS
Sbjct: 218 LLSHNSTINIDDLRTSKAVSRSLSELTTTS 247
>At3g02885.1 68416.m00283 gibberellin-regulated protein 5 (GASA5) /
gibberellin-responsive protein 5 identical to GASA5
[Arabidopsis thaliana] GI:1289320
Length = 97
Score = 28.7 bits (61), Expect = 4.9
Identities = 15/37 (40%), Positives = 16/37 (43%), Gaps = 3/37 (8%)
Frame = -2
Query: 404 PCMSFCSSLQSKTLRYPP---PQSMSCSCLTVNWTTK 303
PCM FC K L PP +C C NW TK
Sbjct: 55 PCMFFCLKCCKKCLCVPPGTFGNKQTCPCYN-NWKTK 90
>At5g22690.1 68418.m02651 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1008
Score = 28.3 bits (60), Expect = 6.4
Identities = 18/70 (25%), Positives = 29/70 (41%)
Frame = +2
Query: 230 LKTSEDARSMLSPVSSNRSVMRVNPW*SSSLSNMNKTLTVEADTSRSLTANWSRRTCTER 409
LK+ D S +S + NR+ + PW S + + E + ++ N S+ E
Sbjct: 717 LKSFPDISSNISELYLNRTAIEEVPWWIQKFSRLKRLRMRECKKLKCISPNISKLKHLEM 776
Query: 410 LHMRLCSALT 439
L C A T
Sbjct: 777 LDFSNCIATT 786
>At1g67180.1 68414.m07642 zinc finger (C3HC4-type RING finger)
family protein / BRCT domain-containing protein contains
Pfam domains PF00533: BRCA1 C Terminus (BRCT) domain and
PF00097: Zinc finger, C3HC4 type (RING finger)
Length = 453
Score = 28.3 bits (60), Expect = 6.4
Identities = 22/68 (32%), Positives = 35/68 (51%)
Frame = +2
Query: 164 KEFGKFKLTAGKFFSDPEDDKGLKTSEDARSMLSPVSSNRSVMRVNPW*SSSLSNMNKTL 343
K+ K T K+FS+ +++ TSE A M V +NR +R+ SS+ NK
Sbjct: 108 KKVNKASETFDKYFSNGGENRSGSTSELATWMEKNVEANRHSVRLRTKRPSSILE-NKEN 166
Query: 344 TVEADTSR 367
+ A++SR
Sbjct: 167 SGVAESSR 174
>At5g35210.2 68418.m04175 peptidase M50 family protein /
sterol-regulatory element binding protein (SREBP) site 2
protease family protein contains PFam PF02163:
sterol-regulatory element binding protein (SREBP) site 2
protease
Length = 1409
Score = 27.9 bits (59), Expect = 8.5
Identities = 13/45 (28%), Positives = 22/45 (48%)
Frame = -1
Query: 543 NVCRHHLCSGYLFDEMVLTLVTEDYVYLLGSRTTNVRAEHNLIWS 409
NV HH+ + + +++L ED+V + R N + E WS
Sbjct: 980 NVLVHHVIMMFYYGNPLVSLSFEDFVTRIALRCLNTQMEMLKFWS 1024
>At5g35210.1 68418.m04174 peptidase M50 family protein /
sterol-regulatory element binding protein (SREBP) site 2
protease family protein contains PFam PF02163:
sterol-regulatory element binding protein (SREBP) site 2
protease
Length = 1576
Score = 27.9 bits (59), Expect = 8.5
Identities = 13/45 (28%), Positives = 22/45 (48%)
Frame = -1
Query: 543 NVCRHHLCSGYLFDEMVLTLVTEDYVYLLGSRTTNVRAEHNLIWS 409
NV HH+ + + +++L ED+V + R N + E WS
Sbjct: 980 NVLVHHVIMMFYYGNPLVSLSFEDFVTRIALRCLNTQMEMLKFWS 1024
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,019,213
Number of Sequences: 28952
Number of extensions: 473521
Number of successful extensions: 1274
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1214
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1267
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1863090400
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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