Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40076
         (880 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY695256-1|AAW21973.1|  168|Tribolium castaneum ventral nerve co...    25   0.59 
AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.      24   1.8  
AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.      24   1.8  
AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    23   3.2  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    23   4.2  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   4.2  
AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esteras...    23   4.2  
AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esteras...    21   9.7  

>AY695256-1|AAW21973.1|  168|Tribolium castaneum ventral nerve cord
           defective protein protein.
          Length = 168

 Score = 25.4 bits (53), Expect = 0.59
 Identities = 14/40 (35%), Positives = 22/40 (55%)
 Frame = +2

Query: 470 RSKRALQHRGGSHAEEPQEPKESPVEI*TRKAPVVSREGQ 589
           ++KRA QH  G H ++   P  SP  +     PV+ R+G+
Sbjct: 94  KTKRA-QHEKGMHDQQNNNPLPSPRRV---AVPVLVRDGK 129


>AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.
          Length = 515

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 3/36 (8%)
 Frame = -3

Query: 830 LGPEL*TLSGKNLGP---LKGFTSFSNRGNPNWPGP 732
           L PEL T S + +     +K +T+F+  G+PN  GP
Sbjct: 435 LSPELKTGSLEEISVKRFVKFWTNFARNGSPNVDGP 470


>AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.
          Length = 517

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 3/36 (8%)
 Frame = -3

Query: 830 LGPEL*TLSGKNLGP---LKGFTSFSNRGNPNWPGP 732
           L PEL T S + +     +K +T+F+  G+PN  GP
Sbjct: 437 LSPELKTGSLEEISVKRFVKFWTNFARNGSPNVDGP 472


>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = +1

Query: 70  LAHLCEFIEDCEHVTLAVRIL 132
           + + C+F+ +C H TL + IL
Sbjct: 138 IENYCQFLYNCFHSTLLLMIL 158


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 10/36 (27%), Positives = 19/36 (52%)
 Frame = -1

Query: 304 DNKTLIFGSNSGREAPNEQQQILQQPELDLTPKSLC 197
           D KTL+  +  G E P ++++  ++ E     + LC
Sbjct: 526 DGKTLVSVTKEGLELPEDEEEKKKREEDKAKFEGLC 561


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +1

Query: 46   NPDAKETGLAHLCEFIE 96
            NP A+   +AH+ +FIE
Sbjct: 1917 NPSARRRFIAHVVDFIE 1933


>AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esterase
           protein.
          Length = 515

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = -3

Query: 785 LKGFTSFSNRGNPNWPGP 732
           +K +T+F+  G+PN  GP
Sbjct: 453 VKFWTNFARNGSPNVDGP 470


>AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = -3

Query: 785 LKGFTSFSNRGNPNWPGPKN 726
           +K +T+F+  GNPN P  +N
Sbjct: 465 VKLWTNFAKNGNPN-PSEEN 483


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 204,418
Number of Sequences: 336
Number of extensions: 4465
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24306755
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)