Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40075
         (862 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q2SNB9 Cluster: FOG: EAL domain; n=1; Hahella chejuensi...    34   4.0  
UniRef50_A2XZL0 Cluster: Metallothionein-like protein 2C; n=7; B...    34   5.3  
UniRef50_UPI000049865C Cluster: metallo-beta-lactamase superfami...    33   9.3  
UniRef50_Q2Q0E4 Cluster: Phosphoribosylformylglycinamidine synth...    33   9.3  

>UniRef50_Q2SNB9 Cluster: FOG: EAL domain; n=1; Hahella chejuensis
           KCTC 2396|Rep: FOG: EAL domain - Hahella chejuensis
           (strain KCTC 2396)
          Length = 402

 Score = 34.3 bits (75), Expect = 4.0
 Identities = 18/55 (32%), Positives = 27/55 (49%)
 Frame = -3

Query: 734 WLSISGLLPWPIPTDIITFYYTLYVHIQHPEHTIPHFCLLHEHLPKWELNPQHLT 570
           +L++ G L  P+  D +T+Y T Y       HT+    LL+    +  LN  HLT
Sbjct: 108 YLNVLGSLQKPVTVDALTYYLTHYQSYFRSRHTVSGGSLLNTSELRQGLNDGHLT 162


>UniRef50_A2XZL0 Cluster: Metallothionein-like protein 2C; n=7; BEP
           clade|Rep: Metallothionein-like protein 2C - Oryza
           sativa subsp. indica (Rice)
          Length = 84

 Score = 33.9 bits (74), Expect = 5.3
 Identities = 12/21 (57%), Positives = 13/21 (61%)
 Frame = +1

Query: 601 GKCSCNKQKCGIVCSGC*MCT 663
           G C CN  KCG  CSGC  C+
Sbjct: 62  GGCGCNTCKCGTSCSGCSCCS 82


>UniRef50_UPI000049865C Cluster: metallo-beta-lactamase superfamily
           protein; n=2; Entamoeba histolytica HM-1:IMSS|Rep:
           metallo-beta-lactamase superfamily protein - Entamoeba
           histolytica HM-1:IMSS
          Length = 622

 Score = 33.1 bits (72), Expect = 9.3
 Identities = 15/37 (40%), Positives = 23/37 (62%)
 Frame = +3

Query: 117 VEQPSTESPTREFEFEVPIINEDCNNEELNLSMGNLV 227
           +E P  E+P+ EF F +P +   C +EE+N  M NL+
Sbjct: 245 IETPGAEAPS-EFVFYIPSMKAFCASEEINHIMHNLI 280


>UniRef50_Q2Q0E4 Cluster: Phosphoribosylformylglycinamidine synthase
           II; n=1; uncultured organism HF10_3D09|Rep:
           Phosphoribosylformylglycinamidine synthase II -
           uncultured organism HF10_3D09
          Length = 1008

 Score = 33.1 bits (72), Expect = 9.3
 Identities = 17/50 (34%), Positives = 29/50 (58%), Gaps = 7/50 (14%)
 Frame = -3

Query: 695 TDIITFYYTLYVHIQHPEHTIPHFCL--LHEHLPKWELN-----PQHLTW 567
           T + TF  T Y H++H + T+ +  +  LH+ +P+ EL      PQH+T+
Sbjct: 584 TQVATFTNTGYFHVKHGDETVAYLPIEFLHDGVPQLELESEWVPPQHVTF 633


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 811,129,610
Number of Sequences: 1657284
Number of extensions: 16309651
Number of successful extensions: 37484
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 35573
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37463
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 76243001646
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)