Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40075
         (862 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.     24   1.8  
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    24   1.8  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           24   1.8  
AF243042-1|AAF68438.1|  126|Tribolium castaneum mutant transcrip...    24   1.8  
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    23   4.1  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    22   5.4  
EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    21   9.5  
AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2 prot...    21   9.5  
AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    21   9.5  

>U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.
          Length = 283

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = -2

Query: 855 QQFKTVIPRPKIPPRDKYNFKVFQ*KGG 772
           Q    V+  PK PP ++YN   +   GG
Sbjct: 20  QHISGVVVDPKFPPSEEYNQNSYIPPGG 47


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = -2

Query: 855 QQFKTVIPRPKIPPRDKYNFKVFQ*KGG 772
           Q    V+  PK PP ++YN   +   GG
Sbjct: 20  QHISGVVVDPKFPPSEEYNQNSYIPPGG 47


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = -2

Query: 855 QQFKTVIPRPKIPPRDKYNFKVFQ*KGG 772
           Q    V+  PK PP ++YN   +   GG
Sbjct: 20  QHISGVVVDPKFPPSEEYNQNSYIPPGG 47


>AF243042-1|AAF68438.1|  126|Tribolium castaneum mutant
           transcription factor TcDfd1 protein.
          Length = 126

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = -2

Query: 855 QQFKTVIPRPKIPPRDKYNFKVFQ*KGG 772
           Q    V+  PK PP ++YN   +   GG
Sbjct: 20  QHISGVVVDPKFPPSEEYNQNSYIPPGG 47


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 8/23 (34%), Positives = 15/23 (65%)
 Frame = -1

Query: 427 IFSVGYHWFAFISIENSCYQINS 359
           +FS G+    F+S+  SC ++N+
Sbjct: 392 MFSFGFILLRFLSVFESCTRLNN 414


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 8/10 (80%), Positives = 8/10 (80%)
 Frame = +3

Query: 171 IINEDCNNEE 200
           I NEDCNN E
Sbjct: 542 ICNEDCNNPE 551


>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -3

Query: 713 LPWPIPTDIITFYY 672
           L  P PTDI +FY+
Sbjct: 31  LTTPTPTDINSFYF 44


>AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2
           protein.
          Length = 377

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = -1

Query: 634 SHIFVCYMSIYPNG 593
           +HI   ++ +YPNG
Sbjct: 54  THINYAFLGVYPNG 67


>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 9/30 (30%), Positives = 15/30 (50%)
 Frame = -1

Query: 412 YHWFAFISIENSCYQINSCFKIDQHIFLLS 323
           +H +    IEN C  + +CF     + +LS
Sbjct: 130 WHRYTLSFIENYCQFLYNCFHSTLLLMILS 159


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 202,855
Number of Sequences: 336
Number of extensions: 4515
Number of successful extensions: 13
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23866870
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)