Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40070
(759 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X69120-1|CAA48872.1| 267|Drosophila melanogaster ribosoaml prot... 173 2e-43
U01335-1|AAA87053.1| 267|Drosophila melanogaster ribosomal prot... 173 2e-43
U01334-1|AAC34198.1| 267|Drosophila melanogaster ribosomal prot... 173 2e-43
AY094799-1|AAM11152.1| 267|Drosophila melanogaster LD24077p pro... 173 2e-43
AE014134-1713|AAF52822.1| 267|Drosophila melanogaster CG5920-PA... 173 2e-43
>X69120-1|CAA48872.1| 267|Drosophila melanogaster ribosoaml protein
S2 protein.
Length = 267
Score = 173 bits (421), Expect = 2e-43
Identities = 81/85 (95%), Positives = 83/85 (97%)
Frame = +2
Query: 254 LDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRG 433
+DFFLG SL DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRG
Sbjct: 77 IDFFLGSSLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRG 136
Query: 434 AIILAKLSVLPVRRGYWGNKIGKPH 508
AIILAKLSV+PVRRGYWGNKIGKPH
Sbjct: 137 AIILAKLSVVPVRRGYWGNKIGKPH 161
Score = 84.6 bits (200), Expect = 1e-16
Identities = 44/75 (58%), Positives = 48/75 (64%)
Frame = +1
Query: 499 KATPVPCKVTGKCGSVTIRLIPAPRGTGIVSAPIPKKLSFRWLVYRDATPQLVVQLAPWE 678
K VPCKVTGKCGSV++RLIPAPRGTGIVSAP+P+KL D
Sbjct: 159 KPHTVPCKVTGKCGSVSVRLIPAPRGTGIVSAPVPRKL-LTMAGIEDCYTSARGSTGTLG 217
Query: 679 NLLKPTYAAIAKTYA 723
N K TYAAIAKTYA
Sbjct: 218 NFAKATYAAIAKTYA 232
Score = 77.4 bits (182), Expect = 2e-14
Identities = 35/41 (85%), Positives = 37/41 (90%)
Frame = +3
Query: 135 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIL 257
KED KEWVPVTKLGRLVREGKI LE IYL+SLPIKEFEI+
Sbjct: 37 KEDSKEWVPVTKLGRLVREGKIKSLEEIYLYSLPIKEFEII 77
>U01335-1|AAA87053.1| 267|Drosophila melanogaster ribosomal protein
S2 protein.
Length = 267
Score = 173 bits (421), Expect = 2e-43
Identities = 81/85 (95%), Positives = 83/85 (97%)
Frame = +2
Query: 254 LDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRG 433
+DFFLG SL DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRG
Sbjct: 77 IDFFLGSSLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRG 136
Query: 434 AIILAKLSVLPVRRGYWGNKIGKPH 508
AIILAKLSV+PVRRGYWGNKIGKPH
Sbjct: 137 AIILAKLSVVPVRRGYWGNKIGKPH 161
Score = 85.8 bits (203), Expect = 6e-17
Identities = 45/75 (60%), Positives = 48/75 (64%)
Frame = +1
Query: 499 KATPVPCKVTGKCGSVTIRLIPAPRGTGIVSAPIPKKLSFRWLVYRDATPQLVVQLAPWE 678
K VPCKVTGKCGSV++RLIPAPRGTGIVSAP+PKKL D
Sbjct: 159 KPHTVPCKVTGKCGSVSVRLIPAPRGTGIVSAPVPKKL-LTMAGIEDCYTSARGSTGTLG 217
Query: 679 NLLKPTYAAIAKTYA 723
N K TYAAIAKTYA
Sbjct: 218 NFAKATYAAIAKTYA 232
Score = 77.4 bits (182), Expect = 2e-14
Identities = 35/41 (85%), Positives = 37/41 (90%)
Frame = +3
Query: 135 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIL 257
KED KEWVPVTKLGRLVREGKI LE IYL+SLPIKEFEI+
Sbjct: 37 KEDSKEWVPVTKLGRLVREGKIKSLEEIYLYSLPIKEFEII 77
>U01334-1|AAC34198.1| 267|Drosophila melanogaster ribosomal protein
S2 protein.
Length = 267
Score = 173 bits (421), Expect = 2e-43
Identities = 81/85 (95%), Positives = 83/85 (97%)
Frame = +2
Query: 254 LDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRG 433
+DFFLG SL DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRG
Sbjct: 77 IDFFLGSSLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRG 136
Query: 434 AIILAKLSVLPVRRGYWGNKIGKPH 508
AIILAKLSV+PVRRGYWGNKIGKPH
Sbjct: 137 AIILAKLSVVPVRRGYWGNKIGKPH 161
Score = 85.8 bits (203), Expect = 6e-17
Identities = 45/75 (60%), Positives = 48/75 (64%)
Frame = +1
Query: 499 KATPVPCKVTGKCGSVTIRLIPAPRGTGIVSAPIPKKLSFRWLVYRDATPQLVVQLAPWE 678
K VPCKVTGKCGSV++RLIPAPRGTGIVSAP+PKKL D
Sbjct: 159 KPHTVPCKVTGKCGSVSVRLIPAPRGTGIVSAPVPKKL-LTMAGIEDCYTSARGSTGTLG 217
Query: 679 NLLKPTYAAIAKTYA 723
N K TYAAIAKTYA
Sbjct: 218 NFAKATYAAIAKTYA 232
Score = 77.4 bits (182), Expect = 2e-14
Identities = 35/41 (85%), Positives = 37/41 (90%)
Frame = +3
Query: 135 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIL 257
KED KEWVPVTKLGRLVREGKI LE IYL+SLPIKEFEI+
Sbjct: 37 KEDSKEWVPVTKLGRLVREGKIKSLEEIYLYSLPIKEFEII 77
>AY094799-1|AAM11152.1| 267|Drosophila melanogaster LD24077p
protein.
Length = 267
Score = 173 bits (421), Expect = 2e-43
Identities = 81/85 (95%), Positives = 83/85 (97%)
Frame = +2
Query: 254 LDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRG 433
+DFFLG SL DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRG
Sbjct: 77 IDFFLGSSLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRG 136
Query: 434 AIILAKLSVLPVRRGYWGNKIGKPH 508
AIILAKLSV+PVRRGYWGNKIGKPH
Sbjct: 137 AIILAKLSVVPVRRGYWGNKIGKPH 161
Score = 85.8 bits (203), Expect = 6e-17
Identities = 45/75 (60%), Positives = 48/75 (64%)
Frame = +1
Query: 499 KATPVPCKVTGKCGSVTIRLIPAPRGTGIVSAPIPKKLSFRWLVYRDATPQLVVQLAPWE 678
K VPCKVTGKCGSV++RLIPAPRGTGIVSAP+PKKL D
Sbjct: 159 KPHTVPCKVTGKCGSVSVRLIPAPRGTGIVSAPVPKKL-LTMAGIEDCYTSARGSTGTLG 217
Query: 679 NLLKPTYAAIAKTYA 723
N K TYAAIAKTYA
Sbjct: 218 NFAKATYAAIAKTYA 232
Score = 77.4 bits (182), Expect = 2e-14
Identities = 35/41 (85%), Positives = 37/41 (90%)
Frame = +3
Query: 135 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIL 257
KED KEWVPVTKLGRLVREGKI LE IYL+SLPIKEFEI+
Sbjct: 37 KEDSKEWVPVTKLGRLVREGKIKSLEEIYLYSLPIKEFEII 77
>AE014134-1713|AAF52822.1| 267|Drosophila melanogaster CG5920-PA
protein.
Length = 267
Score = 173 bits (421), Expect = 2e-43
Identities = 81/85 (95%), Positives = 83/85 (97%)
Frame = +2
Query: 254 LDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRG 433
+DFFLG SL DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRG
Sbjct: 77 IDFFLGSSLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRG 136
Query: 434 AIILAKLSVLPVRRGYWGNKIGKPH 508
AIILAKLSV+PVRRGYWGNKIGKPH
Sbjct: 137 AIILAKLSVVPVRRGYWGNKIGKPH 161
Score = 85.8 bits (203), Expect = 6e-17
Identities = 45/75 (60%), Positives = 48/75 (64%)
Frame = +1
Query: 499 KATPVPCKVTGKCGSVTIRLIPAPRGTGIVSAPIPKKLSFRWLVYRDATPQLVVQLAPWE 678
K VPCKVTGKCGSV++RLIPAPRGTGIVSAP+PKKL D
Sbjct: 159 KPHTVPCKVTGKCGSVSVRLIPAPRGTGIVSAPVPKKL-LTMAGIEDCYTSARGSTGTLG 217
Query: 679 NLLKPTYAAIAKTYA 723
N K TYAAIAKTYA
Sbjct: 218 NFAKATYAAIAKTYA 232
Score = 77.4 bits (182), Expect = 2e-14
Identities = 35/41 (85%), Positives = 37/41 (90%)
Frame = +3
Query: 135 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIL 257
KED KEWVPVTKLGRLVREGKI LE IYL+SLPIKEFEI+
Sbjct: 37 KEDSKEWVPVTKLGRLVREGKIKSLEEIYLYSLPIKEFEII 77
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 36,358,673
Number of Sequences: 53049
Number of extensions: 859283
Number of successful extensions: 2343
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2247
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2333
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3478915869
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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