Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40069
(752 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g31970.1 68415.m03906 DNA repair-recombination protein (RAD50... 79 4e-15
At2g37280.1 68415.m04573 ABC transporter family protein similar ... 34 0.088
At5g41910.1 68418.m05102 RNA polymerase II mediator complex prot... 32 0.47
At4g15215.1 68417.m02332 ABC transporter family protein similar ... 31 0.62
At4g20850.1 68417.m03025 subtilase family protein contains simil... 31 1.1
At4g15230.1 68417.m02333 ABC transporter family protein similar ... 31 1.1
At2g40360.1 68415.m04977 transducin family protein / WD-40 repea... 31 1.1
At4g30300.1 68417.m04306 ABC transporter family protein ribonucl... 30 1.9
At4g15236.1 68417.m02335 ABC transporter family protein similar ... 30 1.9
At4g33460.1 68417.m04753 ABC transporter family protein ABC-type... 29 2.5
At4g19210.1 68417.m02834 RNase L inhibitor protein, putative sim... 29 2.5
At3g53480.1 68416.m05904 ABC transporter family protein PDR5-lik... 29 2.5
At3g47730.1 68416.m05200 ABC transporter family protein AbcA, Di... 29 2.5
At3g13640.1 68416.m01718 RNase L inhibitor protein, putative sim... 29 2.5
At2g41700.1 68415.m05151 ABC transporter family protein similar ... 29 3.3
At5g61730.1 68418.m07746 ABC transporter family protein contains... 29 4.4
At5g61690.1 68418.m07740 ABC transporter family protein ABC tran... 29 4.4
At5g55860.1 68418.m06963 expressed protein contains Pfam profile... 29 4.4
At5g44310.2 68418.m05424 late embryogenesis abundant domain-cont... 29 4.4
At5g44310.1 68418.m05423 late embryogenesis abundant domain-cont... 29 4.4
At4g33390.1 68417.m04746 hypothetical protein contains Pfam prof... 29 4.4
At3g30842.1 68416.m03968 ABC transporter protein, putative simil... 29 4.4
At2g36380.1 68415.m04464 ABC transporter family protein related ... 29 4.4
At2g28070.1 68415.m03408 ABC transporter family protein 29 4.4
At1g69610.1 68414.m08006 expressed protein 29 4.4
At1g32060.1 68414.m03944 phosphoribulokinase (PRK) / phosphopent... 29 4.4
At5g66900.1 68418.m08433 disease resistance protein (CC-NBS-LRR ... 28 5.8
At5g57450.2 68418.m07178 DNA repair family protein contains simi... 28 5.8
At5g57450.1 68418.m07177 DNA repair family protein contains simi... 28 5.8
At5g42880.1 68418.m05226 hypothetical protein contains Pfam prof... 28 5.8
At5g19960.1 68418.m02376 RNA recognition motif (RRM)-containing ... 28 5.8
At1g33560.1 68414.m04153 disease resistance protein (CC-NBS-LRR ... 28 5.8
At5g40910.1 68418.m04967 disease resistance protein (TIR-NBS-LRR... 28 7.7
At5g20860.1 68418.m02477 pectinesterase family protein contains ... 28 7.7
At2g26570.1 68415.m03187 expressed protein contains Pfam profile... 28 7.7
At1g76810.1 68414.m08938 eukaryotic translation initiation facto... 28 7.7
At1g53490.1 68414.m06064 bZIP protein 28 7.7
At1g17600.1 68414.m02173 disease resistance protein (TIR-NBS-LRR... 28 7.7
>At2g31970.1 68415.m03906 DNA repair-recombination protein (RAD50)
identical to DNA repair-recombination protein GI:7110148
from [Arabidopsis thaliana]
Length = 1316
Score = 78.6 bits (185), Expect = 4e-15
Identities = 38/73 (52%), Positives = 52/73 (71%), Gaps = 1/73 (1%)
Frame = +3
Query: 36 MAGVKSLAIRGIRSFGPEDTDEQRILFDSPLTLILGQNGCGKTTIIECLRYAITGQMPPG 215
M+ V + I+GIRSF PE+ + + F PLTLI+G NG GKTTIIECL+ + TG++PP
Sbjct: 1 MSTVDKMLIKGIRSFDPENKNV--VTFFRPLTLIVGANGAGKTTIIECLKVSCTGELPPN 58
Query: 216 SRN-ECFVHDAKV 251
+R+ F+HD KV
Sbjct: 59 ARSGHSFIHDPKV 71
Score = 58.8 bits (136), Expect = 4e-09
Identities = 23/60 (38%), Positives = 41/60 (68%)
Frame = +1
Query: 511 HQEDSSWPLDEGKKVKERFDEIFDADKYSDCLDRLKKIRKDYAQNLKLLEQEVAHLTEKK 690
HQ++S+WPL + +K++FD+IF A +Y+ L+ +KK+ KD AQ +K + ++ +L K
Sbjct: 159 HQDESNWPLQDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTFKLKLENLQTLK 218
Score = 54.8 bits (126), Expect = 6e-08
Identities = 31/84 (36%), Positives = 51/84 (60%), Gaps = 1/84 (1%)
Frame = +2
Query: 260 TEVLGQVKLKIVNAKDKQLEVTRSMKVTALAKKKTKFQTLDSFLSTVD-ESGKTKDVSSR 436
TE Q+KL+ A K + RS ++T A K +++ ++S L T++ +G+ +S R
Sbjct: 75 TETKAQIKLRFKTAAGKDVVCIRSFQLTQKASKM-EYKAIESVLQTINPHTGEKVCLSYR 133
Query: 437 CADLDILMHEELGVSKAILNSVVF 508
CAD+D + +GVSKAIL +V+F
Sbjct: 134 CADMDREIPALMGVSKAILENVIF 157
>At2g37280.1 68415.m04573 ABC transporter family protein similar to
PDR5-like ABC transporter GI:1514643 from [Spirodela
polyrhiza]
Length = 1413
Score = 34.3 bits (75), Expect = 0.088
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = +3
Query: 93 TDEQRILFDSPLTLILGQNGCGKTTIIECL 182
TD I+ LTL+LG GCGKTT+++ L
Sbjct: 156 TDVSGIISPGRLTLLLGPPGCGKTTLLKAL 185
>At5g41910.1 68418.m05102 RNA polymerase II mediator complex
protein-related similar to SP|P87310 RNA polymerase II
mediator complex protein nut2 {Schizosaccharomyces
pombe}
Length = 186
Score = 31.9 bits (69), Expect = 0.47
Identities = 28/107 (26%), Positives = 49/107 (45%), Gaps = 9/107 (8%)
Frame = +2
Query: 287 KIVNAKDKQLEVTRSMKVTAL----AKKKTKFQTLDSFLSTVDESGKTKDVSSRCADLDI 454
+I+N+ K LE+ +K+T A + Q L+S + +D K D + +++
Sbjct: 37 QIINSNQKILELLHQLKLTVSSFTPASQLHLLQRLNSLVMELDNMAKLSDKCNIQVPIEV 96
Query: 455 LMHEELG-----VSKAILNSVVFATKKIQAGHSMKEKRLRKDLMKFL 580
L + G +K +LN A ++ G S K LRK L++ L
Sbjct: 97 LNLIDDGKNPDEFTKDVLNKNCIAKNQVTKGKSDAFKGLRKHLLEEL 143
>At4g15215.1 68417.m02332 ABC transporter family protein similar to
PDR5-like ABC transporter [Spirodela polyrhiza]
GI:1514643; contains Pfam profile PF00005: ABC
transporter
Length = 1390
Score = 31.5 bits (68), Expect = 0.62
Identities = 12/32 (37%), Positives = 21/32 (65%)
Frame = +3
Query: 126 LTLILGQNGCGKTTIIECLRYAITGQMPPGSR 221
+TL+LG GCGKTT+++ L ++ + G +
Sbjct: 166 MTLLLGPPGCGKTTLLQALSGRLSHSVKVGGK 197
>At4g20850.1 68417.m03025 subtilase family protein contains
similarity to Tripeptidyl-peptidase II (EC 3.4.14.10)
(TPP-II) (Tripeptidyl aminopeptidase)
(Swiss-Prot:P29144) [Homo sapiens]
Length = 1380
Score = 30.7 bits (66), Expect = 1.1
Identities = 17/69 (24%), Positives = 35/69 (50%), Gaps = 2/69 (2%)
Frame = +1
Query: 502 RICHQEDSSWPLDEGKKVKERFDEIFDAD-KYSDCLD-RLKKIRKDYAQNLKLLEQEVAH 675
R+ + SW +++ + + ++D D K+S D +LKK R+D + L+++
Sbjct: 230 RVKKERRKSWDEKNQEEIAKAVNNLYDFDQKHSKVEDAKLKKTREDLQSKVDFLKKQADK 289
Query: 676 LTEKKPDLD 702
+K P +D
Sbjct: 290 YEDKGPVID 298
>At4g15230.1 68417.m02333 ABC transporter family protein similar to
pleiotropic drug resistance like protein [Nicotiana
tabacum] GI:20522008, PDR5-like ABC transporter
[Spirodela polyrhiza] GI:1514643; contains Pfam profile
PF00005: ABC transporter
Length = 1326
Score = 30.7 bits (66), Expect = 1.1
Identities = 11/19 (57%), Positives = 16/19 (84%)
Frame = +3
Query: 126 LTLILGQNGCGKTTIIECL 182
+TL+LG GCGKTT+++ L
Sbjct: 169 MTLLLGPPGCGKTTLLQAL 187
>At2g40360.1 68415.m04977 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to block of proliferation protein Bop1
(GI:1679772) [Mus musculus]
Length = 753
Score = 30.7 bits (66), Expect = 1.1
Identities = 18/47 (38%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = +2
Query: 356 KKTKFQTLDSFLSTVDESGKTKDVSSRCADLDI-LMHEELGVSKAIL 493
KK K LDSFL+T+D+S + + D D+ L EE + + IL
Sbjct: 174 KKEKQDKLDSFLATIDDSKTWRKIYDEYNDEDVELTKEESKIVQRIL 220
>At4g30300.1 68417.m04306 ABC transporter family protein
ribonuclease L inhibitor - Mus musculus,PIR2:JC6555
Length = 181
Score = 29.9 bits (64), Expect = 1.9
Identities = 12/22 (54%), Positives = 17/22 (77%)
Frame = +3
Query: 117 DSPLTLILGQNGCGKTTIIECL 182
DS + ++LG+NG GKTT I+ L
Sbjct: 19 DSQIIVMLGENGTGKTTFIKML 40
>At4g15236.1 68417.m02335 ABC transporter family protein similar to
pleiotropic drug resistance like protein [Nicotiana
tabacum] GI:20522008, ABC1 protein [Nicotiana
plumbaginifolia] GI:14331118; contains Pfam profile
PF00005: ABC transporter
Length = 1388
Score = 29.9 bits (64), Expect = 1.9
Identities = 13/29 (44%), Positives = 21/29 (72%)
Frame = +3
Query: 126 LTLILGQNGCGKTTIIECLRYAITGQMPP 212
+TL+LG GCGKTT++ A++G++ P
Sbjct: 164 MTLLLGPPGCGKTTLL----LALSGRLDP 188
>At4g33460.1 68417.m04753 ABC transporter family protein ABC-type
transport protein sll1623 -Synechocystis,PIR2:S74812
Length = 271
Score = 29.5 bits (63), Expect = 2.5
Identities = 11/19 (57%), Positives = 16/19 (84%)
Frame = +3
Query: 126 LTLILGQNGCGKTTIIECL 182
L +ILG NGCGK+T+++ L
Sbjct: 72 LWMILGPNGCGKSTLLKIL 90
>At4g19210.1 68417.m02834 RNase L inhibitor protein, putative
similar to 68 kDa protein HP68 GI:16755057 from
[Triticum aestivum]
Length = 605
Score = 29.5 bits (63), Expect = 2.5
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +3
Query: 117 DSPLTLILGQNGCGKTTIIECL 182
DS + ++LG+NG GKTT I L
Sbjct: 373 DSQIIVMLGENGTGKTTFIRML 394
>At3g53480.1 68416.m05904 ABC transporter family protein PDR5-like
ABC transporter, Spirodela polyrrhiza, EMBL:Z70524
Length = 1450
Score = 29.5 bits (63), Expect = 2.5
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +3
Query: 96 DEQRILFDSPLTLILGQNGCGKTTIIECL 182
D I+ LTL+LG CGKTT+++ L
Sbjct: 192 DVNGIIKPGRLTLLLGPPSCGKTTLLKAL 220
>At3g47730.1 68416.m05200 ABC transporter family protein AbcA,
Dictyostelium discoideum, DDU66526
Length = 983
Score = 29.5 bits (63), Expect = 2.5
Identities = 14/27 (51%), Positives = 17/27 (62%), Gaps = 2/27 (7%)
Frame = +3
Query: 126 LTLILGQNGCGKTTIIECLR--YAITG 200
L +LG NG GKTT I CL + +TG
Sbjct: 559 LFCLLGPNGAGKTTTINCLTGLFPVTG 585
>At3g13640.1 68416.m01718 RNase L inhibitor protein, putative
similar to 68 kDa protein HP68 GI:16755057 from
[Triticum aestivum]
Length = 603
Score = 29.5 bits (63), Expect = 2.5
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +3
Query: 117 DSPLTLILGQNGCGKTTIIECL 182
DS + ++LG+NG GKTT I L
Sbjct: 373 DSQIIVMLGENGTGKTTFIRML 394
>At2g41700.1 68415.m05151 ABC transporter family protein similar to
ATP-binding cassette transporter ABCA1 GI:18031705 from
[Arabidopsis thaliana]
Length = 1822
Score = 29.1 bits (62), Expect = 3.3
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +3
Query: 102 QRILFDSPLTLILGQNGCGKTTIIECLRYAITGQMPPGS 218
Q L+++ + +LG NG GK+T I L G +PP S
Sbjct: 506 QLTLYENQILSLLGHNGAGKSTTISML----VGLLPPTS 540
>At5g61730.1 68418.m07746 ABC transporter family protein contains
Pfam profile: PF00005 ABC transporter
Length = 940
Score = 28.7 bits (61), Expect = 4.4
Identities = 12/19 (63%), Positives = 13/19 (68%)
Frame = +3
Query: 126 LTLILGQNGCGKTTIIECL 182
L +LG NG GKTT I CL
Sbjct: 551 LFCLLGPNGAGKTTTISCL 569
>At5g61690.1 68418.m07740 ABC transporter family protein ABC
transport protein, Dictyostelium discoideum, PIR:T18288
Length = 954
Score = 28.7 bits (61), Expect = 4.4
Identities = 12/19 (63%), Positives = 13/19 (68%)
Frame = +3
Query: 126 LTLILGQNGCGKTTIIECL 182
L +LG NG GKTT I CL
Sbjct: 537 LFCLLGPNGAGKTTTISCL 555
>At5g55860.1 68418.m06963 expressed protein contains Pfam profile
PF05701: Plant protein of unknown function (DUF827);
expression supported by MPSS
Length = 649
Score = 28.7 bits (61), Expect = 4.4
Identities = 18/81 (22%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Frame = +1
Query: 493 KFCRICHQEDSSWPLDEGKKVKERFDEIFDADKYS-DCLDRLKKIRKDYAQNLKLLEQEV 669
++ +C + D++ E +K+++ +EI + + ++ KK+ K +++ ++LL +E+
Sbjct: 154 EYGEVCKELDTA--KQELRKIRQVSNEILETKTVALSKVEEAKKVSKVHSEKIELLRKEI 211
Query: 670 AHLTEKKPDLDQEKLNVVNSR 732
A + E ++Q KL +R
Sbjct: 212 AAVNE---SVEQTKLACSQAR 229
>At5g44310.2 68418.m05424 late embryogenesis abundant
domain-containing protein / LEA domain-containing
protein low similarity to 51 kDa seed maturation protein
[Glycine max] GI:414977; contains Pfam profile PF02987:
Late embryogenesis abundant protein
Length = 331
Score = 28.7 bits (61), Expect = 4.4
Identities = 16/60 (26%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Frame = +1
Query: 547 KKVKERFDEIFDADKYSDCLDRLKKIRKDYAQNLKLLEQEVAH-LTEKKPDLDQEKLNVV 723
++ K++ +E A + +D + K KDYA++ K +++AH EK D+ ++ ++ V
Sbjct: 218 EQTKDKVNE--GASRAADKAEETKDKAKDYAEDSKEKAEDMAHGFKEKAQDIGEKTMDTV 275
>At5g44310.1 68418.m05423 late embryogenesis abundant
domain-containing protein / LEA domain-containing
protein low similarity to 51 kDa seed maturation protein
[Glycine max] GI:414977; contains Pfam profile PF02987:
Late embryogenesis abundant protein
Length = 295
Score = 28.7 bits (61), Expect = 4.4
Identities = 16/60 (26%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Frame = +1
Query: 547 KKVKERFDEIFDADKYSDCLDRLKKIRKDYAQNLKLLEQEVAH-LTEKKPDLDQEKLNVV 723
++ K++ +E A + +D + K KDYA++ K +++AH EK D+ ++ ++ V
Sbjct: 182 EQTKDKVNE--GASRAADKAEETKDKAKDYAEDSKEKAEDMAHGFKEKAQDIGEKTMDTV 239
>At4g33390.1 68417.m04746 hypothetical protein contains Pfam profile
PF05701: Plant protein of unknown function (DUF827)
Length = 779
Score = 28.7 bits (61), Expect = 4.4
Identities = 19/81 (23%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
Frame = +2
Query: 299 AKDKQLEVTRSMKVTALAKKKTKFQTLDSFLSTVDESGKTKDVSSRCADLDILMHEELGV 478
A QLEV ++ +A+++ ++ + L + + D K KD++ + A+ ++ +E+
Sbjct: 273 ASKAQLEVAQARHTSAISELESVKEELQTLQNEYDALVKEKDLAVKEAEEAVIASKEVER 332
Query: 479 SKAILNSVVFATKK-IQAGHS 538
L + ATK+ ++ HS
Sbjct: 333 KVEELTIELIATKESLECAHS 353
>At3g30842.1 68416.m03968 ABC transporter protein, putative similar
to pleiotropic drug resistance like protein [Nicotiana
tabacum] GI:20522008, ABC1 protein [Nicotiana
plumbaginifolia] GI:14331118; contains Pfam profile
PF00005: ABC transporter
Length = 1406
Score = 28.7 bits (61), Expect = 4.4
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = +3
Query: 18 ENLTYNMAGVKSLAIRGIRSFGPEDTDEQRILF-DSPLTLILGQNGCGKTTIIECL 182
EN+TY++ K + +GIR + F LT ++G +G GKTT+++ L
Sbjct: 817 ENITYSVDTPKEMKEKGIRENKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVL 872
>At2g36380.1 68415.m04464 ABC transporter family protein related to
multi drug resistance proteins and P-glycoproteins
Length = 1453
Score = 28.7 bits (61), Expect = 4.4
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +3
Query: 126 LTLILGQNGCGKTTIIECLRYAITGQMPPGSRN 224
LT ++G +G GKTT+++ L TG GS N
Sbjct: 892 LTALVGVSGAGKTTLMDVLAGRKTGGYVEGSIN 924
>At2g28070.1 68415.m03408 ABC transporter family protein
Length = 730
Score = 28.7 bits (61), Expect = 4.4
Identities = 15/47 (31%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
Frame = +3
Query: 114 FDSPLTLILGQNGCGKTTIIECLRYAITGQMPPGSR--NECFVHDAK 248
F +T+I+G GK+T++ A+ G++PP ++ E FV+ +K
Sbjct: 142 FPGTMTVIMGPAKSGKSTLLR----ALAGRLPPSAKMYGEVFVNGSK 184
>At1g69610.1 68414.m08006 expressed protein
Length = 636
Score = 28.7 bits (61), Expect = 4.4
Identities = 21/69 (30%), Positives = 37/69 (53%), Gaps = 6/69 (8%)
Frame = +1
Query: 505 ICHQEDSSWPLDEGKKVKERFDEIFDAD----KYSDCLDRLK-KIRKDYAQNL-KLLEQE 666
I +E+ DE ++V + FD+ D+D ++SD +++LK ++R L +LE+
Sbjct: 230 IHREEEMKMGFDEQEEVYDEFDDGSDSDDDEFEHSDVIEKLKTELRTARTGGLCTILEES 289
Query: 667 VAHLTEKKP 693
L E KP
Sbjct: 290 ETPLQELKP 298
>At1g32060.1 68414.m03944 phosphoribulokinase (PRK) /
phosphopentokinase nearly identical to SP|P25697
Phosphoribulokinase, chloroplast precursor (EC 2.7.1.19)
(Phosphopentokinase) (PRKASE) (PRK) {Arabidopsis
thaliana}
Length = 395
Score = 28.7 bits (61), Expect = 4.4
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
Frame = +1
Query: 559 ERFDEIFDADKYSDCLDRLK---KIRKDYAQNLKLLEQEVAHLTEKKPDLD 702
ER ++ D Y D + +K KI++D A+ LE A + +KPD D
Sbjct: 178 ERVRDLLDFSIYLDISNEVKFAWKIQRDMAERGHSLESIKASIEARKPDFD 228
>At5g66900.1 68418.m08433 disease resistance protein (CC-NBS-LRR
class), putative domain signature CC-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 809
Score = 28.3 bits (60), Expect = 5.8
Identities = 13/29 (44%), Positives = 21/29 (72%), Gaps = 1/29 (3%)
Frame = +3
Query: 99 EQRILFDSPLTLILGQN-GCGKTTIIECL 182
++R+L DS +TL++ GCGKTT++ L
Sbjct: 179 KKRLLDDSVVTLVVSAPPGCGKTTLVSRL 207
>At5g57450.2 68418.m07178 DNA repair family protein contains
similarity to Swiss-Prot:O43542 DNA-repair protein XRCC3
(X-ray repair cross-complementing protein 3) [Homo
sapiens]
Length = 304
Score = 28.3 bits (60), Expect = 5.8
Identities = 12/28 (42%), Positives = 20/28 (71%)
Frame = +3
Query: 126 LTLILGQNGCGKTTIIECLRYAITGQMP 209
LT I+ ++GCGKT + CL+ ++ Q+P
Sbjct: 41 LTEIVAESGCGKTQL--CLQLSLCTQLP 66
>At5g57450.1 68418.m07177 DNA repair family protein contains
similarity to Swiss-Prot:O43542 DNA-repair protein XRCC3
(X-ray repair cross-complementing protein 3) [Homo
sapiens]
Length = 304
Score = 28.3 bits (60), Expect = 5.8
Identities = 12/28 (42%), Positives = 20/28 (71%)
Frame = +3
Query: 126 LTLILGQNGCGKTTIIECLRYAITGQMP 209
LT I+ ++GCGKT + CL+ ++ Q+P
Sbjct: 41 LTEIVAESGCGKTQL--CLQLSLCTQLP 66
>At5g42880.1 68418.m05226 hypothetical protein contains Pfam profile
PF05701: Plant protein of unknown function (DUF827)
Length = 751
Score = 28.3 bits (60), Expect = 5.8
Identities = 15/71 (21%), Positives = 42/71 (59%)
Frame = +2
Query: 311 QLEVTRSMKVTALAKKKTKFQTLDSFLSTVDESGKTKDVSSRCADLDILMHEELGVSKAI 490
QLEV ++ +V+A ++ ++ + ++ + + + K++++ AD+ +L +E+ +
Sbjct: 255 QLEVAKARQVSATSELRSVREEIEMVSNEYKDMLREKELAAERADIAVLEAKEIERTMDG 314
Query: 491 LNSVVFATKKI 523
L+ + ATK++
Sbjct: 315 LSIELIATKEL 325
>At5g19960.1 68418.m02376 RNA recognition motif (RRM)-containing
protein low similarity to glycine-rich RNA-binding
protein [Euphorbia esula] GI:2645699; contains
INTERPRO:IPR000504 RNA-binding region RNP-1 (RNA
recognition motif) (RRM) domain
Length = 337
Score = 28.3 bits (60), Expect = 5.8
Identities = 21/62 (33%), Positives = 29/62 (46%), Gaps = 3/62 (4%)
Frame = +1
Query: 562 RFDEIFDADKYSDCL---DRLKKIRKDYAQNLKLLEQEVAHLTEKKPDLDQEKLNVVNSR 732
R D ++ D+YSD DR + RKD+ K E +H E++ D D N R
Sbjct: 109 RSDGNYERDRYSDRSRERDRSQDRRKDHRYIEKERAYEHSHDFERRNDHDMVDRNGYKER 168
Query: 733 VF 738
VF
Sbjct: 169 VF 170
>At1g33560.1 68414.m04153 disease resistance protein (CC-NBS-LRR
class), putative domain signature CC-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 787
Score = 28.3 bits (60), Expect = 5.8
Identities = 12/29 (41%), Positives = 18/29 (62%), Gaps = 2/29 (6%)
Frame = -1
Query: 491 VWLLKPQVPHA*GC--PNRHILKIHLLFC 411
+WL + VP C P +++ KIHL+FC
Sbjct: 582 LWLKRVHVPELTSCTIPLKNLHKIHLIFC 610
>At5g40910.1 68418.m04967 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Non-consensus TT donor splice site at exon 1
Length = 1104
Score = 27.9 bits (59), Expect = 7.7
Identities = 17/41 (41%), Positives = 20/41 (48%)
Frame = +3
Query: 135 ILGQNGCGKTTIIECLRYAITGQMPPGSRNECFVHDAKVND 257
I G G GKTTI A+ Q+ G R CF+ VND
Sbjct: 211 IWGPAGIGKTTIAR----ALFNQLSTGFRLSCFMGTIDVND 247
>At5g20860.1 68418.m02477 pectinesterase family protein contains
Pfam profile: PF01095 pectinesterase
Length = 512
Score = 27.9 bits (59), Expect = 7.7
Identities = 17/46 (36%), Positives = 22/46 (47%)
Frame = -3
Query: 519 FLVANTTEFSMAFETPSSSCIRMSKSAHLEDTSFVLPLSSTVERKE 382
FLV T S P SS + SK LED+++ LP S + E
Sbjct: 68 FLVNKTISDSNLLIPPLSSSMGSSKLVSLEDSTYTLPSPSVSDSCE 113
>At2g26570.1 68415.m03187 expressed protein contains Pfam profile
PF05701: Plant protein of unknown function (DUF827);
weak similarity to merozoite surface protein 3 alpha
(GI:27596802) [Plasmodium vivax]
Length = 807
Score = 27.9 bits (59), Expect = 7.7
Identities = 19/81 (23%), Positives = 41/81 (50%), Gaps = 1/81 (1%)
Frame = +2
Query: 299 AKDKQLEVTRSMKVTALAKKKTKFQTLDSFLSTVDESGKTKDVSSRCADLDILMHEELGV 478
A QLEV ++ TA+ + + + L++ D + KDV+ + + +L +E+
Sbjct: 282 AAKAQLEVAKARHTTAITELSSVKEELETLHKEYDALVQDKDVAVKKVEEAMLASKEVEK 341
Query: 479 SKAILNSVVFATKK-IQAGHS 538
+ L + ATK+ +++ H+
Sbjct: 342 TVEELTIELIATKESLESAHA 362
>At1g76810.1 68414.m08938 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to IF2
protein [Drosophila melanogaster] GI:7108770; contains
Pfam profile PF03144: Elongation factor Tu domain 2
Length = 1294
Score = 27.9 bits (59), Expect = 7.7
Identities = 11/38 (28%), Positives = 20/38 (52%)
Frame = +3
Query: 72 RSFGPEDTDEQRILFDSPLTLILGQNGCGKTTIIECLR 185
+ P ++ E SP+ I+G GKT +++C+R
Sbjct: 689 KGLAPSESIEGEENLRSPICCIMGHVDTGKTKLLDCIR 726
>At1g53490.1 68414.m06064 bZIP protein
Length = 229
Score = 27.9 bits (59), Expect = 7.7
Identities = 13/43 (30%), Positives = 28/43 (65%)
Frame = +1
Query: 589 KYSDCLDRLKKIRKDYAQNLKLLEQEVAHLTEKKPDLDQEKLN 717
K+S+ ++++ + + +++EQEV +LT+ K +L QEK +
Sbjct: 40 KFSEKMEQVHTAYQKMGKRCQMMEQEVENLTKDKQEL-QEKFS 81
>At1g17600.1 68414.m02173 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1025
Score = 27.9 bits (59), Expect = 7.7
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +3
Query: 135 ILGQNGCGKTTIIECLRYAITGQMPPGSRNECFVHDAK 248
I G G GKT+I++CL Q+ P CF+ + K
Sbjct: 210 IWGMGGIGKTSIVKCL----YDQLSPKFPAHCFIENIK 243
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,636,894
Number of Sequences: 28952
Number of extensions: 354547
Number of successful extensions: 1309
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 1222
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1307
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1672953192
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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