Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40065
(866 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X62515-1|CAA44373.1| 4393|Homo sapiens Human basement membrane h... 46 1e-04
M85289-1|AAA52700.1| 4391|Homo sapiens heparan sulfate proteogly... 46 1e-04
AL590556-2|CAH71870.1| 4391|Homo sapiens heparan sulfate proteog... 46 1e-04
AL590103-2|CAI12125.1| 4391|Homo sapiens heparan sulfate proteog... 46 1e-04
AL445795-1|CAC18534.1| 4370|Homo sapiens heparan sulfate proteog... 46 1e-04
AB209851-1|BAD93088.1| 2331|Homo sapiens Basement membrane-speci... 46 1e-04
BC063822-1|AAH63822.1| 1009|Homo sapiens EGF-like, fibronectin t... 45 3e-04
BC033188-1|AAH33188.1| 152|Homo sapiens EGF-like, fibronectin t... 45 3e-04
BC033177-1|AAH33177.1| 152|Homo sapiens EGF-like, fibronectin t... 45 3e-04
BC031251-1|AAH31251.1| 375|Homo sapiens EGF-like, fibronectin t... 45 3e-04
AK097549-1|BAC05096.1| 775|Homo sapiens protein ( Homo sapiens ... 45 3e-04
AK092994-1|BAC04013.1| 152|Homo sapiens protein ( Homo sapiens ... 45 3e-04
AK092479-1|BAC03900.1| 463|Homo sapiens protein ( Homo sapiens ... 45 3e-04
BC150194-1|AAI50195.1| 459|Homo sapiens NRXN3 protein protein. 35 0.33
BC142649-1|AAI42650.1| 459|Homo sapiens NRXN3 protein protein. 35 0.33
BC068469-1|AAH68469.1| 432|Homo sapiens neurexin 3 protein. 35 0.33
BC059368-1|AAH59368.1| 432|Homo sapiens neurexin 3 protein. 35 0.33
AJ493127-1|CAD37989.1| 398|Homo sapiens neurexin 3-beta protein. 35 0.33
AJ316284-1|CAC87720.2| 1392|Homo sapiens neurexin 3-alpha protein. 35 0.33
AB018286-1|BAA34463.2| 1205|Homo sapiens KIAA0743 protein protein. 35 0.33
BC109204-1|AAI09205.1| 351|Homo sapiens HSPG2 protein protein. 34 0.58
Z26653-1|CAA81394.1| 3110|Homo sapiens laminin M chain (merosin)... 34 0.77
U66796-1|AAB18388.1| 3110|Homo sapiens laminin alpha 2 chain pro... 34 0.77
M59832-1|AAA63215.1| 1130|Homo sapiens merosin protein. 34 0.77
AL669984-2|CAI16682.1| 3122|Homo sapiens laminin, alpha 2 (meros... 34 0.77
AL590613-1|CAH70771.1| 3122|Homo sapiens laminin, alpha 2 (meros... 34 0.77
AL583853-1|CAH70492.1| 3122|Homo sapiens laminin, alpha 2 (meros... 34 0.77
AL513527-1|CAI15185.1| 3122|Homo sapiens laminin, alpha 2 (meros... 34 0.77
AL445439-1|CAH72952.1| 3122|Homo sapiens laminin, alpha 2 (meros... 34 0.77
AL356124-1|CAI22470.1| 3122|Homo sapiens laminin, alpha 2 (meros... 34 0.77
AB208922-1|BAD92159.1| 1853|Homo sapiens laminin alpha 2 subunit... 34 0.77
X58531-1|CAA41418.1| 2628|Homo sapiens laminin A chain protein. 32 3.1
U97669-1|AAB91371.1| 2321|Homo sapiens Notch3 protein. 31 5.4
BC150275-1|AAI50276.1| 1642|Homo sapiens neurexin 2 protein. 31 5.4
AK057327-1|BAB71429.1| 721|Homo sapiens protein ( Homo sapiens ... 31 5.4
AF463518-1|AAL68839.1| 1311|Homo sapiens cell recognition protei... 31 5.4
AF058900-1|AAC14346.1| 2321|Homo sapiens Notch3 protein. 31 5.4
AC044790-1|AAK68154.1| 1712|Homo sapiens NRXN2 protein. 31 5.4
AC004663-1|AAC15789.1| 2281|Homo sapiens Notch 3 protein. 31 5.4
AB209447-1|BAD92684.1| 1289|Homo sapiens Notch homolog 3 variant... 31 5.4
AB177862-1|BAD66840.1| 1434|Homo sapiens KIAA0921 splice variant... 31 5.4
AB100094-1|BAC55272.1| 1308|Homo sapiens hypothetical protein pr... 31 5.4
AB051550-1|BAB21854.2| 1322|Homo sapiens KIAA1763 protein protein. 31 5.4
AB035266-1|BAA94075.1| 1712|Homo sapiens neurexin II protein. 31 5.4
AB023138-1|BAA76765.2| 1658|Homo sapiens KIAA0921 protein protein. 31 5.4
AL645608-13|CAI15575.2| 2045|Homo sapiens agrin protein. 31 7.2
AF016903-1|AAC39776.1| 2026|Homo sapiens agrin precursor protein. 31 7.2
AB191264-1|BAD52440.1| 2045|Homo sapiens agrin protein. 31 7.2
BC062318-1|AAH62318.1| 559|Homo sapiens LAMA1 protein protein. 30 9.5
BC039051-1|AAH39051.1| 747|Homo sapiens LAMA1 protein protein. 30 9.5
>X62515-1|CAA44373.1| 4393|Homo sapiens Human basement membrane
heparan sulfate proteoglycan core protein protein.
Length = 4393
Score = 46.4 bits (105), Expect = 1e-04
Identities = 27/76 (35%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Frame = +3
Query: 12 TTNDGVLAYQREGQAPPNEG-DYFLLRIERGFVVLEWDLGGGLSSIVVDVPINDGERHQV 188
+T G+L +Q +G D+ L ++ G +V + LG G + +V + PINDGE H+V
Sbjct: 4239 STASGLLLWQGVEVGEAGQGKDFISLGLQDGHLVFRYQLGSGEARLVSEDPINDGEWHRV 4298
Query: 189 AARLHEDGHAWLSVDG 236
A L E + VDG
Sbjct: 4299 TA-LREGRRGSIQVDG 4313
Score = 35.1 bits (77), Expect = 0.33
Identities = 23/65 (35%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Frame = +3
Query: 21 DGVLAYQREGQAPPNEGDYFLLRIERGFVVLEWDLGGGLSSIVVDVPINDGERHQVAA-R 197
DGVL + G++ P E D+ L + G + ++LG GL+ + P+ G H+V+A R
Sbjct: 3965 DGVLLFSG-GKSGPVE-DFVSLAMVGGHLEFRYELGSGLAVLRTAEPLALGRWHRVSAER 4022
Query: 198 LHEDG 212
L++DG
Sbjct: 4023 LNKDG 4027
Score = 32.3 bits (70), Expect = 2.4
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 9/69 (13%)
Frame = +2
Query: 260 GISNVMNADSNIYIGGIPSWLNIHG---YPGFIGCIENVETTDSH------RCLNLRDTA 412
G + +NA +IYIGG P + G G GC++N+ + + L+L+ A
Sbjct: 4323 GPNVAVNAKGSIYIGGAPDVATLTGGRFSSGITGCVKNLVLHSARPGAPPPQPLDLQHRA 4382
Query: 413 VAGRNTQLC 439
AG NT+ C
Sbjct: 4383 QAGANTRPC 4391
>M85289-1|AAA52700.1| 4391|Homo sapiens heparan sulfate proteoglycan
protein.
Length = 4391
Score = 46.4 bits (105), Expect = 1e-04
Identities = 27/76 (35%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Frame = +3
Query: 12 TTNDGVLAYQREGQAPPNEG-DYFLLRIERGFVVLEWDLGGGLSSIVVDVPINDGERHQV 188
+T G+L +Q +G D+ L ++ G +V + LG G + +V + PINDGE H+V
Sbjct: 4237 STASGLLLWQGVEVGEAGQGKDFISLGLQDGHLVFRYQLGSGEARLVSEDPINDGEWHRV 4296
Query: 189 AARLHEDGHAWLSVDG 236
A L E + VDG
Sbjct: 4297 TA-LREGRRGSIQVDG 4311
Score = 34.3 bits (75), Expect = 0.58
Identities = 23/65 (35%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Frame = +3
Query: 21 DGVLAYQREGQAPPNEGDYFLLRIERGFVVLEWDLGGGLSSIVVDVPINDGERHQVAA-R 197
DGVL + G++ P E D+ L + G + ++LG GL+ + P+ G H+V+A R
Sbjct: 3963 DGVLLFSG-GKSGPVE-DFVSLAMVGGHLEFRYELGSGLAVLRSAEPLALGRWHRVSAER 4020
Query: 198 LHEDG 212
L++DG
Sbjct: 4021 LNKDG 4025
Score = 31.9 bits (69), Expect = 3.1
Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 9/69 (13%)
Frame = +2
Query: 260 GISNVMNADSNIYIGGIPSWLNIHG---YPGFIGCIENVETTDSH------RCLNLRDTA 412
G + +NA ++YIGG P + G G GC++N+ + + L+L+ A
Sbjct: 4321 GPNVAVNAKGSVYIGGAPDVATLTGGRFSSGITGCVKNLVLHSARPGAPPPQPLDLQHRA 4380
Query: 413 VAGRNTQLC 439
AG NT+ C
Sbjct: 4381 QAGANTRPC 4389
>AL590556-2|CAH71870.1| 4391|Homo sapiens heparan sulfate proteoglycan
2 protein.
Length = 4391
Score = 46.4 bits (105), Expect = 1e-04
Identities = 27/76 (35%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Frame = +3
Query: 12 TTNDGVLAYQREGQAPPNEG-DYFLLRIERGFVVLEWDLGGGLSSIVVDVPINDGERHQV 188
+T G+L +Q +G D+ L ++ G +V + LG G + +V + PINDGE H+V
Sbjct: 4237 STASGLLLWQGVEVGEAGQGKDFISLGLQDGHLVFRYQLGSGEARLVSEDPINDGEWHRV 4296
Query: 189 AARLHEDGHAWLSVDG 236
A L E + VDG
Sbjct: 4297 TA-LREGRRGSIQVDG 4311
Score = 34.3 bits (75), Expect = 0.58
Identities = 23/65 (35%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Frame = +3
Query: 21 DGVLAYQREGQAPPNEGDYFLLRIERGFVVLEWDLGGGLSSIVVDVPINDGERHQVAA-R 197
DGVL + G++ P E D+ L + G + ++LG GL+ + P+ G H+V+A R
Sbjct: 3963 DGVLLFSG-GKSGPVE-DFVSLAMVGGHLEFRYELGSGLAVLRSAEPLALGRWHRVSAER 4020
Query: 198 LHEDG 212
L++DG
Sbjct: 4021 LNKDG 4025
Score = 31.9 bits (69), Expect = 3.1
Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 9/69 (13%)
Frame = +2
Query: 260 GISNVMNADSNIYIGGIPSWLNIHG---YPGFIGCIENVETTDSH------RCLNLRDTA 412
G + +NA ++YIGG P + G G GC++N+ + + L+L+ A
Sbjct: 4321 GPNVAVNAKGSVYIGGAPDVATLTGGRFSSGITGCVKNLVLHSARPGAPPPQPLDLQHRA 4380
Query: 413 VAGRNTQLC 439
AG NT+ C
Sbjct: 4381 QAGANTRPC 4389
>AL590103-2|CAI12125.1| 4391|Homo sapiens heparan sulfate proteoglycan
2 protein.
Length = 4391
Score = 46.4 bits (105), Expect = 1e-04
Identities = 27/76 (35%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Frame = +3
Query: 12 TTNDGVLAYQREGQAPPNEG-DYFLLRIERGFVVLEWDLGGGLSSIVVDVPINDGERHQV 188
+T G+L +Q +G D+ L ++ G +V + LG G + +V + PINDGE H+V
Sbjct: 4237 STASGLLLWQGVEVGEAGQGKDFISLGLQDGHLVFRYQLGSGEARLVSEDPINDGEWHRV 4296
Query: 189 AARLHEDGHAWLSVDG 236
A L E + VDG
Sbjct: 4297 TA-LREGRRGSIQVDG 4311
Score = 34.3 bits (75), Expect = 0.58
Identities = 23/65 (35%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Frame = +3
Query: 21 DGVLAYQREGQAPPNEGDYFLLRIERGFVVLEWDLGGGLSSIVVDVPINDGERHQVAA-R 197
DGVL + G++ P E D+ L + G + ++LG GL+ + P+ G H+V+A R
Sbjct: 3963 DGVLLFSG-GKSGPVE-DFVSLAMVGGHLEFRYELGSGLAVLRSAEPLALGRWHRVSAER 4020
Query: 198 LHEDG 212
L++DG
Sbjct: 4021 LNKDG 4025
Score = 31.9 bits (69), Expect = 3.1
Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 9/69 (13%)
Frame = +2
Query: 260 GISNVMNADSNIYIGGIPSWLNIHG---YPGFIGCIENVETTDSH------RCLNLRDTA 412
G + +NA ++YIGG P + G G GC++N+ + + L+L+ A
Sbjct: 4321 GPNVAVNAKGSVYIGGAPDVATLTGGRFSSGITGCVKNLVLHSARPGAPPPQPLDLQHRA 4380
Query: 413 VAGRNTQLC 439
AG NT+ C
Sbjct: 4381 QAGANTRPC 4389
>AL445795-1|CAC18534.1| 4370|Homo sapiens heparan sulfate proteoglycan
perlecan protein.
Length = 4370
Score = 46.4 bits (105), Expect = 1e-04
Identities = 27/76 (35%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Frame = +3
Query: 12 TTNDGVLAYQREGQAPPNEG-DYFLLRIERGFVVLEWDLGGGLSSIVVDVPINDGERHQV 188
+T G+L +Q +G D+ L ++ G +V + LG G + +V + PINDGE H+V
Sbjct: 4216 STASGLLLWQGVEVGEAGQGKDFISLGLQDGHLVFRYQLGSGEARLVSEDPINDGEWHRV 4275
Query: 189 AARLHEDGHAWLSVDG 236
A L E + VDG
Sbjct: 4276 TA-LREGRRGSIQVDG 4290
Score = 34.3 bits (75), Expect = 0.58
Identities = 23/65 (35%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Frame = +3
Query: 21 DGVLAYQREGQAPPNEGDYFLLRIERGFVVLEWDLGGGLSSIVVDVPINDGERHQVAA-R 197
DGVL + G++ P E D+ L + G + ++LG GL+ + P+ G H+V+A R
Sbjct: 3942 DGVLLFSG-GKSGPVE-DFVSLAMVGGHLEFRYELGSGLAVLRSAEPLALGRWHRVSAER 3999
Query: 198 LHEDG 212
L++DG
Sbjct: 4000 LNKDG 4004
Score = 31.9 bits (69), Expect = 3.1
Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 9/69 (13%)
Frame = +2
Query: 260 GISNVMNADSNIYIGGIPSWLNIHG---YPGFIGCIENVETTDSH------RCLNLRDTA 412
G + +NA ++YIGG P + G G GC++N+ + + L+L+ A
Sbjct: 4300 GPNVAVNAKGSVYIGGAPDVATLTGGRFSSGITGCVKNLVLHSARPGAPPPQPLDLQHRA 4359
Query: 413 VAGRNTQLC 439
AG NT+ C
Sbjct: 4360 QAGANTRPC 4368
>AB209851-1|BAD93088.1| 2331|Homo sapiens Basement membrane-specific
heparan sulfate proteoglycan core protein precursor
protein.
Length = 2331
Score = 46.4 bits (105), Expect = 1e-04
Identities = 27/76 (35%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Frame = +3
Query: 12 TTNDGVLAYQREGQAPPNEG-DYFLLRIERGFVVLEWDLGGGLSSIVVDVPINDGERHQV 188
+T G+L +Q +G D+ L ++ G +V + LG G + +V + PINDGE H+V
Sbjct: 2177 STASGLLLWQGVEVGEAGQGKDFISLGLQDGHLVFRYQLGSGEARLVSEDPINDGEWHRV 2236
Query: 189 AARLHEDGHAWLSVDG 236
A L E + VDG
Sbjct: 2237 TA-LREGRRGSIQVDG 2251
Score = 34.3 bits (75), Expect = 0.58
Identities = 23/65 (35%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Frame = +3
Query: 21 DGVLAYQREGQAPPNEGDYFLLRIERGFVVLEWDLGGGLSSIVVDVPINDGERHQVAA-R 197
DGVL + G++ P E D+ L + G + ++LG GL+ + P+ G H+V+A R
Sbjct: 1903 DGVLLFSG-GKSGPVE-DFVSLAMVGGHLEFRYELGSGLAVLRSAEPLALGRWHRVSAER 1960
Query: 198 LHEDG 212
L++DG
Sbjct: 1961 LNKDG 1965
Score = 33.9 bits (74), Expect = 0.77
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 9/69 (13%)
Frame = +2
Query: 260 GISNVMNADSNIYIGGIPSWLNIHG---YPGFIGCIENVETTDSH------RCLNLRDTA 412
G + +NA N+YIGG P + G G GC++N+ + + L+L+ A
Sbjct: 2261 GPNVAVNAKGNVYIGGAPDVATLTGGRFSSGITGCVKNLVLHSARPGAPPPQPLDLQHRA 2320
Query: 413 VAGRNTQLC 439
AG NT+ C
Sbjct: 2321 QAGANTRPC 2329
>BC063822-1|AAH63822.1| 1009|Homo sapiens EGF-like, fibronectin type
III and laminin G domains protein.
Length = 1009
Score = 45.2 bits (102), Expect = 3e-04
Identities = 22/61 (36%), Positives = 36/61 (59%)
Frame = +3
Query: 12 TTNDGVLAYQREGQAPPNEGDYFLLRIERGFVVLEWDLGGGLSSIVVDVPINDGERHQVA 191
T DG+L ++ + PN D+ L + G +V ++LG G++SI+V+ NDG H+V
Sbjct: 863 TAKDGLLLWRGDSPMRPNS-DFISLGLRDGALVFSYNLGSGVASIMVNGSFNDGRWHRVK 921
Query: 192 A 194
A
Sbjct: 922 A 922
>BC033188-1|AAH33188.1| 152|Homo sapiens EGF-like, fibronectin type
III and laminin G domains protein.
Length = 152
Score = 45.2 bits (102), Expect = 3e-04
Identities = 22/61 (36%), Positives = 36/61 (59%)
Frame = +3
Query: 12 TTNDGVLAYQREGQAPPNEGDYFLLRIERGFVVLEWDLGGGLSSIVVDVPINDGERHQVA 191
T DG+L ++ + PN D+ L + G +V ++LG G++SI+V+ NDG H+V
Sbjct: 6 TAKDGLLLWRGDSPMRPNS-DFISLGLRDGALVFSYNLGSGVASIMVNGSFNDGRWHRVK 64
Query: 192 A 194
A
Sbjct: 65 A 65
>BC033177-1|AAH33177.1| 152|Homo sapiens EGF-like, fibronectin type
III and laminin G domains protein.
Length = 152
Score = 45.2 bits (102), Expect = 3e-04
Identities = 22/61 (36%), Positives = 36/61 (59%)
Frame = +3
Query: 12 TTNDGVLAYQREGQAPPNEGDYFLLRIERGFVVLEWDLGGGLSSIVVDVPINDGERHQVA 191
T DG+L ++ + PN D+ L + G +V ++LG G++SI+V+ NDG H+V
Sbjct: 6 TAKDGLLLWRGDSPMRPNS-DFISLGLRDGALVFSYNLGSGVASIMVNGSFNDGRWHRVK 64
Query: 192 A 194
A
Sbjct: 65 A 65
>BC031251-1|AAH31251.1| 375|Homo sapiens EGF-like, fibronectin type
III and laminin G domains protein.
Length = 375
Score = 45.2 bits (102), Expect = 3e-04
Identities = 22/61 (36%), Positives = 36/61 (59%)
Frame = +3
Query: 12 TTNDGVLAYQREGQAPPNEGDYFLLRIERGFVVLEWDLGGGLSSIVVDVPINDGERHQVA 191
T DG+L ++ + PN D+ L + G +V ++LG G++SI+V+ NDG H+V
Sbjct: 229 TAKDGLLLWRGDSPMRPNS-DFISLGLRDGALVFSYNLGSGVASIMVNGSFNDGRWHRVK 287
Query: 192 A 194
A
Sbjct: 288 A 288
>AK097549-1|BAC05096.1| 775|Homo sapiens protein ( Homo sapiens
cDNA FLJ40230 fis, clone TESTI2022960, weakly similar to
Drosophila melanogaster SP2353 mRNA. ).
Length = 775
Score = 45.2 bits (102), Expect = 3e-04
Identities = 22/61 (36%), Positives = 36/61 (59%)
Frame = +3
Query: 12 TTNDGVLAYQREGQAPPNEGDYFLLRIERGFVVLEWDLGGGLSSIVVDVPINDGERHQVA 191
T DG+L ++ + PN D+ L + G +V ++LG G++SI+V+ NDG H+V
Sbjct: 629 TAKDGLLLWRGDSPMRPNS-DFISLGLRDGALVFSYNLGSGVASIMVNGSFNDGRWHRVK 687
Query: 192 A 194
A
Sbjct: 688 A 688
>AK092994-1|BAC04013.1| 152|Homo sapiens protein ( Homo sapiens
cDNA FLJ35675 fis, clone SPLEN2018302, weakly similar to
BASEMENT MEMBRANE-SPECIFIC HEPARAN SULFATE PROTEOGLYCAN
CORE ).
Length = 152
Score = 45.2 bits (102), Expect = 3e-04
Identities = 22/61 (36%), Positives = 36/61 (59%)
Frame = +3
Query: 12 TTNDGVLAYQREGQAPPNEGDYFLLRIERGFVVLEWDLGGGLSSIVVDVPINDGERHQVA 191
T DG+L ++ + PN D+ L + G +V ++LG G++SI+V+ NDG H+V
Sbjct: 6 TAKDGLLLWRGDSPMRPNS-DFISLGLRDGALVFSYNLGSGVASIMVNGSFNDGRWHRVK 64
Query: 192 A 194
A
Sbjct: 65 A 65
>AK092479-1|BAC03900.1| 463|Homo sapiens protein ( Homo sapiens
cDNA FLJ35160 fis, clone PLACE6011334, weakly similar to
BASEMENT MEMBRANE-SPECIFIC HEPARAN SULFATE PROTEOGLYCAN
CORE ).
Length = 463
Score = 45.2 bits (102), Expect = 3e-04
Identities = 22/61 (36%), Positives = 36/61 (59%)
Frame = +3
Query: 12 TTNDGVLAYQREGQAPPNEGDYFLLRIERGFVVLEWDLGGGLSSIVVDVPINDGERHQVA 191
T DG+L ++ + PN D+ L + G +V ++LG G++SI+V+ NDG H+V
Sbjct: 317 TAKDGLLLWRGDSPMRPNS-DFISLGLRDGALVFSYNLGSGVASIMVNGSFNDGRWHRVK 375
Query: 192 A 194
A
Sbjct: 376 A 376
>BC150194-1|AAI50195.1| 459|Homo sapiens NRXN3 protein protein.
Length = 459
Score = 35.1 bits (77), Expect = 0.33
Identities = 25/75 (33%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Frame = +3
Query: 12 TTNDGVLAYQREGQAPPNEGDYFLLRIERGFVVLEWDLGGGLSSIVVD-VPINDGERHQV 188
T DG+L + P GD+ L IE+G + + +++G SI + P+NDG+ H V
Sbjct: 120 TVKDGILV---RIDSAPGLGDFLQLHIEQGKIGVVFNIGTVDISIKEERTPVNDGKYH-V 175
Query: 189 AARLHEDGHAWLSVD 233
G+A L VD
Sbjct: 176 VRFTRNGGNATLQVD 190
>BC142649-1|AAI42650.1| 459|Homo sapiens NRXN3 protein protein.
Length = 459
Score = 35.1 bits (77), Expect = 0.33
Identities = 25/75 (33%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Frame = +3
Query: 12 TTNDGVLAYQREGQAPPNEGDYFLLRIERGFVVLEWDLGGGLSSIVVD-VPINDGERHQV 188
T DG+L + P GD+ L IE+G + + +++G SI + P+NDG+ H V
Sbjct: 120 TVKDGILV---RIDSAPGLGDFLQLHIEQGKIGVVFNIGTVDISIKEERTPVNDGKYH-V 175
Query: 189 AARLHEDGHAWLSVD 233
G+A L VD
Sbjct: 176 VRFTRNGGNATLQVD 190
>BC068469-1|AAH68469.1| 432|Homo sapiens neurexin 3 protein.
Length = 432
Score = 35.1 bits (77), Expect = 0.33
Identities = 25/75 (33%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Frame = +3
Query: 12 TTNDGVLAYQREGQAPPNEGDYFLLRIERGFVVLEWDLGGGLSSIVVD-VPINDGERHQV 188
T DG+L + P GD+ L IE+G + + +++G SI + P+NDG+ H V
Sbjct: 120 TVKDGILV---RIDSAPGLGDFLQLHIEQGKIGVVFNIGTVDISIKEERTPVNDGKYH-V 175
Query: 189 AARLHEDGHAWLSVD 233
G+A L VD
Sbjct: 176 VRFTRNGGNATLQVD 190
>BC059368-1|AAH59368.1| 432|Homo sapiens neurexin 3 protein.
Length = 432
Score = 35.1 bits (77), Expect = 0.33
Identities = 25/75 (33%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Frame = +3
Query: 12 TTNDGVLAYQREGQAPPNEGDYFLLRIERGFVVLEWDLGGGLSSIVVD-VPINDGERHQV 188
T DG+L + P GD+ L IE+G + + +++G SI + P+NDG+ H V
Sbjct: 120 TVKDGILV---RIDSAPGLGDFLQLHIEQGKIGVVFNIGTVDISIKEERTPVNDGKYH-V 175
Query: 189 AARLHEDGHAWLSVD 233
G+A L VD
Sbjct: 176 VRFTRNGGNATLQVD 190
>AJ493127-1|CAD37989.1| 398|Homo sapiens neurexin 3-beta protein.
Length = 398
Score = 35.1 bits (77), Expect = 0.33
Identities = 25/75 (33%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Frame = +3
Query: 12 TTNDGVLAYQREGQAPPNEGDYFLLRIERGFVVLEWDLGGGLSSIVVD-VPINDGERHQV 188
T DG+L + P GD+ L IE+G + + +++G SI + P+NDG+ H V
Sbjct: 120 TVKDGILV---RIDSAPGLGDFLQLHIEQGKIGVVFNIGTVDISIKEERTPVNDGKYH-V 175
Query: 189 AARLHEDGHAWLSVD 233
G+A L VD
Sbjct: 176 VRFTRNGGNATLQVD 190
>AJ316284-1|CAC87720.2| 1392|Homo sapiens neurexin 3-alpha protein.
Length = 1392
Score = 35.1 bits (77), Expect = 0.33
Identities = 25/75 (33%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Frame = +3
Query: 12 TTNDGVLAYQREGQAPPNEGDYFLLRIERGFVVLEWDLGGGLSSIVVD-VPINDGERHQV 188
T DG+L + P GD+ L IE+G + + +++G SI + P+NDG+ H V
Sbjct: 1114 TVKDGILV---RIDSAPGLGDFLQLHIEQGKIGVVFNIGTVDISIKEERTPVNDGKYH-V 1169
Query: 189 AARLHEDGHAWLSVD 233
G+A L VD
Sbjct: 1170 VRFTRNGGNATLQVD 1184
>AB018286-1|BAA34463.2| 1205|Homo sapiens KIAA0743 protein protein.
Length = 1205
Score = 35.1 bits (77), Expect = 0.33
Identities = 25/75 (33%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Frame = +3
Query: 12 TTNDGVLAYQREGQAPPNEGDYFLLRIERGFVVLEWDLGGGLSSIVVD-VPINDGERHQV 188
T DG+L + P GD+ L IE+G + + +++G SI + P+NDG+ H V
Sbjct: 896 TVKDGILV---RIDSAPGLGDFLQLHIEQGKIGVVFNIGTVDISIKEERTPVNDGKYH-V 951
Query: 189 AARLHEDGHAWLSVD 233
G+A L VD
Sbjct: 952 VRFTRNGGNATLQVD 966
>BC109204-1|AAI09205.1| 351|Homo sapiens HSPG2 protein protein.
Length = 351
Score = 34.3 bits (75), Expect = 0.58
Identities = 23/65 (35%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Frame = +3
Query: 21 DGVLAYQREGQAPPNEGDYFLLRIERGFVVLEWDLGGGLSSIVVDVPINDGERHQVAA-R 197
DGVL + G++ P E D+ L + G + ++LG GL+ + P+ G H+V+A R
Sbjct: 198 DGVLLFSG-GKSGPVE-DFVSLAMVGGHLEFRYELGSGLAVLRSAEPLALGRWHRVSAER 255
Query: 198 LHEDG 212
L++DG
Sbjct: 256 LNKDG 260
>Z26653-1|CAA81394.1| 3110|Homo sapiens laminin M chain (merosin)
protein.
Length = 3110
Score = 33.9 bits (74), Expect = 0.77
Identities = 16/58 (27%), Positives = 28/58 (48%)
Frame = +3
Query: 63 NEGDYFLLRIERGFVVLEWDLGGGLSSIVVDVPINDGERHQVAARLHEDGHAWLSVDG 236
N D+ +++ G +DLG G + ++ INDG+ H++ + L VDG
Sbjct: 2809 NHADFATVQLRNGLPYFSYDLGSGDTHTMIPTKINDGQWHKIKI-MRSKQEGILYVDG 2865
>U66796-1|AAB18388.1| 3110|Homo sapiens laminin alpha 2 chain protein.
Length = 3110
Score = 33.9 bits (74), Expect = 0.77
Identities = 16/58 (27%), Positives = 28/58 (48%)
Frame = +3
Query: 63 NEGDYFLLRIERGFVVLEWDLGGGLSSIVVDVPINDGERHQVAARLHEDGHAWLSVDG 236
N D+ +++ G +DLG G + ++ INDG+ H++ + L VDG
Sbjct: 2809 NHADFATVQLRNGLPYFSYDLGSGDTHTMIPTKINDGQWHKIKI-MRSKQEGILYVDG 2865
>M59832-1|AAA63215.1| 1130|Homo sapiens merosin protein.
Length = 1130
Score = 33.9 bits (74), Expect = 0.77
Identities = 16/58 (27%), Positives = 28/58 (48%)
Frame = +3
Query: 63 NEGDYFLLRIERGFVVLEWDLGGGLSSIVVDVPINDGERHQVAARLHEDGHAWLSVDG 236
N D+ +++ G +DLG G + ++ INDG+ H++ + L VDG
Sbjct: 829 NHADFATVQLRNGLPYFSYDLGSGDTHTMIPTKINDGQWHKIKI-MRSKQEGILYVDG 885
>AL669984-2|CAI16682.1| 3122|Homo sapiens laminin, alpha 2 (merosin,
congenital muscular dystrophy) protein.
Length = 3122
Score = 33.9 bits (74), Expect = 0.77
Identities = 16/58 (27%), Positives = 28/58 (48%)
Frame = +3
Query: 63 NEGDYFLLRIERGFVVLEWDLGGGLSSIVVDVPINDGERHQVAARLHEDGHAWLSVDG 236
N D+ +++ G +DLG G + ++ INDG+ H++ + L VDG
Sbjct: 2809 NHADFATVQLRNGLPYFSYDLGSGDTHTMIPTKINDGQWHKIKI-MRSKQEGILYVDG 2865
>AL590613-1|CAH70771.1| 3122|Homo sapiens laminin, alpha 2 (merosin,
congenital muscular dystrophy) protein.
Length = 3122
Score = 33.9 bits (74), Expect = 0.77
Identities = 16/58 (27%), Positives = 28/58 (48%)
Frame = +3
Query: 63 NEGDYFLLRIERGFVVLEWDLGGGLSSIVVDVPINDGERHQVAARLHEDGHAWLSVDG 236
N D+ +++ G +DLG G + ++ INDG+ H++ + L VDG
Sbjct: 2809 NHADFATVQLRNGLPYFSYDLGSGDTHTMIPTKINDGQWHKIKI-MRSKQEGILYVDG 2865
>AL583853-1|CAH70492.1| 3122|Homo sapiens laminin, alpha 2 (merosin,
congenital muscular dystrophy) protein.
Length = 3122
Score = 33.9 bits (74), Expect = 0.77
Identities = 16/58 (27%), Positives = 28/58 (48%)
Frame = +3
Query: 63 NEGDYFLLRIERGFVVLEWDLGGGLSSIVVDVPINDGERHQVAARLHEDGHAWLSVDG 236
N D+ +++ G +DLG G + ++ INDG+ H++ + L VDG
Sbjct: 2809 NHADFATVQLRNGLPYFSYDLGSGDTHTMIPTKINDGQWHKIKI-MRSKQEGILYVDG 2865
>AL513527-1|CAI15185.1| 3122|Homo sapiens laminin, alpha 2 (merosin,
congenital muscular dystrophy) protein.
Length = 3122
Score = 33.9 bits (74), Expect = 0.77
Identities = 16/58 (27%), Positives = 28/58 (48%)
Frame = +3
Query: 63 NEGDYFLLRIERGFVVLEWDLGGGLSSIVVDVPINDGERHQVAARLHEDGHAWLSVDG 236
N D+ +++ G +DLG G + ++ INDG+ H++ + L VDG
Sbjct: 2809 NHADFATVQLRNGLPYFSYDLGSGDTHTMIPTKINDGQWHKIKI-MRSKQEGILYVDG 2865
>AL445439-1|CAH72952.1| 3122|Homo sapiens laminin, alpha 2 (merosin,
congenital muscular dystrophy) protein.
Length = 3122
Score = 33.9 bits (74), Expect = 0.77
Identities = 16/58 (27%), Positives = 28/58 (48%)
Frame = +3
Query: 63 NEGDYFLLRIERGFVVLEWDLGGGLSSIVVDVPINDGERHQVAARLHEDGHAWLSVDG 236
N D+ +++ G +DLG G + ++ INDG+ H++ + L VDG
Sbjct: 2809 NHADFATVQLRNGLPYFSYDLGSGDTHTMIPTKINDGQWHKIKI-MRSKQEGILYVDG 2865
>AL356124-1|CAI22470.1| 3122|Homo sapiens laminin, alpha 2 (merosin,
congenital muscular dystrophy) protein.
Length = 3122
Score = 33.9 bits (74), Expect = 0.77
Identities = 16/58 (27%), Positives = 28/58 (48%)
Frame = +3
Query: 63 NEGDYFLLRIERGFVVLEWDLGGGLSSIVVDVPINDGERHQVAARLHEDGHAWLSVDG 236
N D+ +++ G +DLG G + ++ INDG+ H++ + L VDG
Sbjct: 2809 NHADFATVQLRNGLPYFSYDLGSGDTHTMIPTKINDGQWHKIKI-MRSKQEGILYVDG 2865
>AB208922-1|BAD92159.1| 1853|Homo sapiens laminin alpha 2 subunit
precursor variant protein.
Length = 1853
Score = 33.9 bits (74), Expect = 0.77
Identities = 16/58 (27%), Positives = 28/58 (48%)
Frame = +3
Query: 63 NEGDYFLLRIERGFVVLEWDLGGGLSSIVVDVPINDGERHQVAARLHEDGHAWLSVDG 236
N D+ +++ G +DLG G + ++ INDG+ H++ + L VDG
Sbjct: 1540 NHADFATVQLRNGLPYFSYDLGSGDTHTMIPTKINDGQWHKIKI-MRSKQEGILYVDG 1596
>X58531-1|CAA41418.1| 2628|Homo sapiens laminin A chain protein.
Length = 2628
Score = 31.9 bits (69), Expect = 3.1
Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = +3
Query: 72 DYFLLRIERGFVVLEWDLGGGLSSI-VVDVPINDGERHQV 188
D+ + + RG V WDLG G + + D PI+D H +
Sbjct: 2165 DFLAVEMRRGRVAFLWDLGSGSTRLEFPDFPIDDNRWHSI 2204
>U97669-1|AAB91371.1| 2321|Homo sapiens Notch3 protein.
Length = 2321
Score = 31.1 bits (67), Expect = 5.4
Identities = 18/37 (48%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
Frame = +2
Query: 338 PGFIG--CIENVETTDSHRCLNLRDTAVAGRNTQLCR 442
PGF G C NV+ HRCLN T V G NT C+
Sbjct: 226 PGFEGQNCEVNVDDCPGHRCLN-GGTCVDGVNTYNCQ 261
>BC150275-1|AAI50276.1| 1642|Homo sapiens neurexin 2 protein.
Length = 1642
Score = 31.1 bits (67), Expect = 5.4
Identities = 14/44 (31%), Positives = 25/44 (56%), Gaps = 2/44 (4%)
Frame = +3
Query: 63 NEGDYFLLRIERGFVVLEWDLGGGLSSIV--VDVPINDGERHQV 188
N D+ ++ + +G++ +DLG G S + D P+ND + H V
Sbjct: 921 NGNDFIVIELVKGYIHYVFDLGNGPSLMKGNSDKPVNDNQWHNV 964
>AK057327-1|BAB71429.1| 721|Homo sapiens protein ( Homo sapiens
cDNA FLJ32765 fis, clone TESTI2001852, weakly similar to
Homo sapiens contactin associated protein (Caspr) mRNA.
).
Length = 721
Score = 31.1 bits (67), Expect = 5.4
Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Frame = +2
Query: 254 ATGISNVMNADSNIYIGGIPSWLNIHGYP--GFIGCIENV 367
A G N+MN D I GGIP+ +P F GC+EN+
Sbjct: 272 ARGEFNLMNLDYEISFGGIPAPGKSVSFPHRNFHGCLENL 311
>AF463518-1|AAL68839.1| 1311|Homo sapiens cell recognition protein
CASPR4 protein.
Length = 1311
Score = 31.1 bits (67), Expect = 5.4
Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Frame = +2
Query: 254 ATGISNVMNADSNIYIGGIPSWLNIHGYP--GFIGCIENV 367
A G N+MN D I GGIP+ +P F GC+EN+
Sbjct: 300 ARGEFNLMNLDYEISFGGIPAPGKSVSFPHRNFHGCLENL 339
>AF058900-1|AAC14346.1| 2321|Homo sapiens Notch3 protein.
Length = 2321
Score = 31.1 bits (67), Expect = 5.4
Identities = 18/37 (48%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
Frame = +2
Query: 338 PGFIG--CIENVETTDSHRCLNLRDTAVAGRNTQLCR 442
PGF G C NV+ HRCLN T V G NT C+
Sbjct: 226 PGFEGQNCEVNVDDCPGHRCLN-GGTCVDGVNTYNCQ 261
>AC044790-1|AAK68154.1| 1712|Homo sapiens NRXN2 protein.
Length = 1712
Score = 31.1 bits (67), Expect = 5.4
Identities = 14/44 (31%), Positives = 25/44 (56%), Gaps = 2/44 (4%)
Frame = +3
Query: 63 NEGDYFLLRIERGFVVLEWDLGGGLSSIV--VDVPINDGERHQV 188
N D+ ++ + +G++ +DLG G S + D P+ND + H V
Sbjct: 961 NGNDFIVIELVKGYIHYVFDLGNGPSLMKGNSDKPVNDNQWHNV 1004
>AC004663-1|AAC15789.1| 2281|Homo sapiens Notch 3 protein.
Length = 2281
Score = 31.1 bits (67), Expect = 5.4
Identities = 18/37 (48%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
Frame = +2
Query: 338 PGFIG--CIENVETTDSHRCLNLRDTAVAGRNTQLCR 442
PGF G C NV+ HRCLN T V G NT C+
Sbjct: 186 PGFEGQNCEVNVDDCPGHRCLN-GGTCVDGVNTYNCQ 221
>AB209447-1|BAD92684.1| 1289|Homo sapiens Notch homolog 3 variant
protein.
Length = 1289
Score = 31.1 bits (67), Expect = 5.4
Identities = 18/37 (48%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
Frame = +2
Query: 338 PGFIG--CIENVETTDSHRCLNLRDTAVAGRNTQLCR 442
PGF G C NV+ HRCLN T V G NT C+
Sbjct: 229 PGFEGQNCEVNVDDCPGHRCLN-GGTCVDGVNTYNCQ 264
>AB177862-1|BAD66840.1| 1434|Homo sapiens KIAA0921 splice variant 1
protein.
Length = 1434
Score = 31.1 bits (67), Expect = 5.4
Identities = 14/44 (31%), Positives = 25/44 (56%), Gaps = 2/44 (4%)
Frame = +3
Query: 63 NEGDYFLLRIERGFVVLEWDLGGGLSSIV--VDVPINDGERHQV 188
N D+ ++ + +G++ +DLG G S + D P+ND + H V
Sbjct: 683 NGNDFIVIELVKGYIHYVFDLGNGPSLMKGNSDKPVNDNQWHNV 726
>AB100094-1|BAC55272.1| 1308|Homo sapiens hypothetical protein
protein.
Length = 1308
Score = 31.1 bits (67), Expect = 5.4
Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Frame = +2
Query: 254 ATGISNVMNADSNIYIGGIPSWLNIHGYP--GFIGCIENV 367
A G N+MN D I GGIP+ +P F GC+EN+
Sbjct: 297 ARGEFNLMNLDYEISFGGIPAPGKSVSFPHRNFHGCLENL 336
>AB051550-1|BAB21854.2| 1322|Homo sapiens KIAA1763 protein protein.
Length = 1322
Score = 31.1 bits (67), Expect = 5.4
Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Frame = +2
Query: 254 ATGISNVMNADSNIYIGGIPSWLNIHGYP--GFIGCIENV 367
A G N+MN D I GGIP+ +P F GC+EN+
Sbjct: 311 ARGEFNLMNLDYEISFGGIPAPGKSVSFPHRNFHGCLENL 350
>AB035266-1|BAA94075.1| 1712|Homo sapiens neurexin II protein.
Length = 1712
Score = 31.1 bits (67), Expect = 5.4
Identities = 14/44 (31%), Positives = 25/44 (56%), Gaps = 2/44 (4%)
Frame = +3
Query: 63 NEGDYFLLRIERGFVVLEWDLGGGLSSIV--VDVPINDGERHQV 188
N D+ ++ + +G++ +DLG G S + D P+ND + H V
Sbjct: 961 NGNDFIVIELVKGYIHYVFDLGNGPSLMKGNSDKPVNDNQWHNV 1004
>AB023138-1|BAA76765.2| 1658|Homo sapiens KIAA0921 protein protein.
Length = 1658
Score = 31.1 bits (67), Expect = 5.4
Identities = 14/44 (31%), Positives = 25/44 (56%), Gaps = 2/44 (4%)
Frame = +3
Query: 63 NEGDYFLLRIERGFVVLEWDLGGGLSSIV--VDVPINDGERHQV 188
N D+ ++ + +G++ +DLG G S + D P+ND + H V
Sbjct: 937 NGNDFIVIELVKGYIHYVFDLGNGPSLMKGNSDKPVNDNQWHNV 980
>AL645608-13|CAI15575.2| 2045|Homo sapiens agrin protein.
Length = 2045
Score = 30.7 bits (66), Expect = 7.2
Identities = 18/55 (32%), Positives = 27/55 (49%)
Frame = +3
Query: 72 DYFLLRIERGFVVLEWDLGGGLSSIVVDVPINDGERHQVAARLHEDGHAWLSVDG 236
D+ L + G V L +D G G + + VP+ G+ H++ H LSVDG
Sbjct: 1419 DFLALALLDGRVQLRFDTGSGPAVLTSAVPVEPGQWHRLELSRHW-RRGTLSVDG 1472
>AF016903-1|AAC39776.1| 2026|Homo sapiens agrin precursor protein.
Length = 2026
Score = 30.7 bits (66), Expect = 7.2
Identities = 18/55 (32%), Positives = 27/55 (49%)
Frame = +3
Query: 72 DYFLLRIERGFVVLEWDLGGGLSSIVVDVPINDGERHQVAARLHEDGHAWLSVDG 236
D+ L + G V L +D G G + + VP+ G+ H++ H LSVDG
Sbjct: 1400 DFLALALLDGRVQLRFDTGSGPAVLTSAVPVEPGQWHRLELSRHW-RRGTLSVDG 1453
>AB191264-1|BAD52440.1| 2045|Homo sapiens agrin protein.
Length = 2045
Score = 30.7 bits (66), Expect = 7.2
Identities = 18/55 (32%), Positives = 27/55 (49%)
Frame = +3
Query: 72 DYFLLRIERGFVVLEWDLGGGLSSIVVDVPINDGERHQVAARLHEDGHAWLSVDG 236
D+ L + G V L +D G G + + VP+ G+ H++ H LSVDG
Sbjct: 1419 DFLALALLDGRVQLRFDTGSGPAVLTSAVPVEPGQWHRLELSRHW-RRGTLSVDG 1472
>BC062318-1|AAH62318.1| 559|Homo sapiens LAMA1 protein protein.
Length = 559
Score = 30.3 bits (65), Expect = 9.5
Identities = 17/61 (27%), Positives = 32/61 (52%)
Frame = +3
Query: 54 APPNEGDYFLLRIERGFVVLEWDLGGGLSSIVVDVPINDGERHQVAARLHEDGHAWLSVD 233
A N+ DY +L++ G + +DLG G + + ++DG+ H V + +++VD
Sbjct: 240 AHQNQADYAVLQLHGGRLHFMFDLGKGRTKVSHPALLSDGKWHTVKTD-YVKRKGFITVD 298
Query: 234 G 236
G
Sbjct: 299 G 299
>BC039051-1|AAH39051.1| 747|Homo sapiens LAMA1 protein protein.
Length = 747
Score = 30.3 bits (65), Expect = 9.5
Identities = 17/61 (27%), Positives = 32/61 (52%)
Frame = +3
Query: 54 APPNEGDYFLLRIERGFVVLEWDLGGGLSSIVVDVPINDGERHQVAARLHEDGHAWLSVD 233
A N+ DY +L++ G + +DLG G + + ++DG+ H V + +++VD
Sbjct: 428 AHQNQADYAVLQLHGGRLHFMFDLGKGRTKVSHPALLSDGKWHTVKTD-YVKRKGFITVD 486
Query: 234 G 236
G
Sbjct: 487 G 487
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 116,230,891
Number of Sequences: 237096
Number of extensions: 2211206
Number of successful extensions: 4474
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 4164
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4472
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 11095746082
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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