Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40065
(866 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z93395-6|CAB07708.1| 3375|Caenorhabditis elegans Hypothetical pr... 44 1e-04
Z93375-8|CAB07569.1| 3375|Caenorhabditis elegans Hypothetical pr... 44 1e-04
AF132883-1|AAD25092.1| 925|Caenorhabditis elegans UNC-52/Perlec... 44 1e-04
Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical pr... 33 0.35
Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical pr... 33 0.35
D83173-1|BAA11828.1| 1518|Caenorhabditis elegans laminin A protein. 33 0.35
AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha... 33 0.35
AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha... 33 0.35
Z35662-1|CAA84721.1| 4307|Caenorhabditis elegans Hypothetical pr... 32 0.61
Z35599-4|CAA84661.1| 4307|Caenorhabditis elegans Hypothetical pr... 32 0.61
Z34802-10|CAA84339.1| 4307|Caenorhabditis elegans Hypothetical p... 32 0.61
Z75553-6|CAA99951.1| 534|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z75529-9|CAA99789.1| 534|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z81125-10|CAB03385.3| 3102|Caenorhabditis elegans Hypothetical p... 30 1.9
AL008585-1|CAA15432.3| 3102|Caenorhabditis elegans Hypothetical ... 30 1.9
AF074902-1|AAC26793.1| 3102|Caenorhabditis elegans laminin alpha... 30 1.9
AF106573-7|AAC78158.1| 838|Caenorhabditis elegans Hypothetical ... 29 4.3
Z81479-1|CAB03944.1| 1043|Caenorhabditis elegans Hypothetical pr... 28 7.5
Z69788-8|CAA93644.3| 483|Caenorhabditis elegans Hypothetical pr... 28 7.5
Z69636-1|CAA93465.2| 1180|Caenorhabditis elegans Hypothetical pr... 28 7.5
AF016681-12|AAB66170.2| 325|Caenorhabditis elegans Serpentine r... 28 9.9
>Z93395-6|CAB07708.1| 3375|Caenorhabditis elegans Hypothetical protein
ZC101.2e protein.
Length = 3375
Score = 44.4 bits (100), Expect = 1e-04
Identities = 24/65 (36%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
Frame = +2
Query: 254 ATGISNVMNADSNIYIGGIPSWLNIHG---YPGFIGCIENVETTDSHRCLNLRDTAVAGR 424
+TGI ++N D NI++GG+P G F+GCI +VE L+L TA+ G+
Sbjct: 3297 STGILAMLNVDGNIFVGGVPDISKATGGLFSNNFVGCIADVELNGVK--LDLMATAIDGK 3354
Query: 425 NTQLC 439
N + C
Sbjct: 3355 NVKPC 3359
Score = 36.7 bits (81), Expect = 0.021
Identities = 16/56 (28%), Positives = 30/56 (53%)
Frame = +3
Query: 21 DGVLAYQREGQAPPNEGDYFLLRIERGFVVLEWDLGGGLSSIVVDVPINDGERHQV 188
+GVL +Q + DY + I G + ++LGGG + ++ + ++DG+ H V
Sbjct: 3219 NGVLLWQGQRPTVQQMEDYISVGIVNGHLHFSYELGGGAAHLISEERVDDGKEHSV 3274
>Z93375-8|CAB07569.1| 3375|Caenorhabditis elegans Hypothetical protein
ZC101.2e protein.
Length = 3375
Score = 44.4 bits (100), Expect = 1e-04
Identities = 24/65 (36%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
Frame = +2
Query: 254 ATGISNVMNADSNIYIGGIPSWLNIHG---YPGFIGCIENVETTDSHRCLNLRDTAVAGR 424
+TGI ++N D NI++GG+P G F+GCI +VE L+L TA+ G+
Sbjct: 3297 STGILAMLNVDGNIFVGGVPDISKATGGLFSNNFVGCIADVELNGVK--LDLMATAIDGK 3354
Query: 425 NTQLC 439
N + C
Sbjct: 3355 NVKPC 3359
Score = 36.7 bits (81), Expect = 0.021
Identities = 16/56 (28%), Positives = 30/56 (53%)
Frame = +3
Query: 21 DGVLAYQREGQAPPNEGDYFLLRIERGFVVLEWDLGGGLSSIVVDVPINDGERHQV 188
+GVL +Q + DY + I G + ++LGGG + ++ + ++DG+ H V
Sbjct: 3219 NGVLLWQGQRPTVQQMEDYISVGIVNGHLHFSYELGGGAAHLISEERVDDGKEHSV 3274
>AF132883-1|AAD25092.1| 925|Caenorhabditis elegans UNC-52/Perlecan
protein.
Length = 925
Score = 44.4 bits (100), Expect = 1e-04
Identities = 24/65 (36%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
Frame = +2
Query: 254 ATGISNVMNADSNIYIGGIPSWLNIHG---YPGFIGCIENVETTDSHRCLNLRDTAVAGR 424
+TGI ++N D NI++GG+P G F+GCI +VE L+L TA+ G+
Sbjct: 847 STGILAMLNVDGNIFVGGVPDISKATGGLFSNNFVGCIADVELNGVK--LDLMATAIDGK 904
Query: 425 NTQLC 439
N + C
Sbjct: 905 NVKPC 909
Score = 36.7 bits (81), Expect = 0.021
Identities = 16/56 (28%), Positives = 30/56 (53%)
Frame = +3
Query: 21 DGVLAYQREGQAPPNEGDYFLLRIERGFVVLEWDLGGGLSSIVVDVPINDGERHQV 188
+GVL +Q + DY + I G + ++LGGG + ++ + ++DG+ H V
Sbjct: 769 NGVLLWQGQRPTVQQMEDYISVGIVNGHLHFSYELGGGAAHLISEERVDDGKEHSV 824
>Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical protein
K08C7.3b protein.
Length = 3672
Score = 32.7 bits (71), Expect = 0.35
Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = +3
Query: 72 DYFLLRIERGFVVLEWDLGGGLSSIVVDVP-INDGERHQVAARLHEDGHAWLSVDG 236
D+ L + G V L DLG G+ + + NDG+ H V+ + E+ H + +DG
Sbjct: 2943 DFMALELSDGGVKLSVDLGSGVGQWITESSNYNDGKWHTVSI-VREEKHVKIMIDG 2997
Score = 28.7 bits (61), Expect = 5.7
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +3
Query: 72 DYFLLRIERGFVVLEWDLGGGLSSIVVDVPINDG 173
DY IE G + DLG + + +D P+NDG
Sbjct: 2751 DYVAAEIEYGRPKITVDLGDAPAVVKLDTPVNDG 2784
Score = 28.3 bits (60), Expect = 7.5
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = +3
Query: 72 DYFLLRIERGFVVLEWDLGGGLSSIVVDVPINDGERHQV 188
D+ + +E G VV +D G G I D I DG H +
Sbjct: 3358 DHIAVMLEHGRVVFTYDTGSGQVIIKSDKSIIDGRWHTI 3396
>Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical protein
K08C7.3a protein.
Length = 3704
Score = 32.7 bits (71), Expect = 0.35
Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = +3
Query: 72 DYFLLRIERGFVVLEWDLGGGLSSIVVDVP-INDGERHQVAARLHEDGHAWLSVDG 236
D+ L + G V L DLG G+ + + NDG+ H V+ + E+ H + +DG
Sbjct: 2943 DFMALELSDGGVKLSVDLGSGVGQWITESSNYNDGKWHTVSI-VREEKHVKIMIDG 2997
Score = 28.7 bits (61), Expect = 5.7
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +3
Query: 72 DYFLLRIERGFVVLEWDLGGGLSSIVVDVPINDG 173
DY IE G + DLG + + +D P+NDG
Sbjct: 2751 DYVAAEIEYGRPKITVDLGDAPAVVKLDTPVNDG 2784
Score = 28.3 bits (60), Expect = 7.5
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = +3
Query: 72 DYFLLRIERGFVVLEWDLGGGLSSIVVDVPINDGERHQV 188
D+ + +E G VV +D G G I D I DG H +
Sbjct: 3390 DHIAVMLEHGRVVFTYDTGSGQVIIKSDKSIIDGRWHTI 3428
>D83173-1|BAA11828.1| 1518|Caenorhabditis elegans laminin A protein.
Length = 1518
Score = 32.7 bits (71), Expect = 0.35
Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = +3
Query: 72 DYFLLRIERGFVVLEWDLGGGLSSIVVDVP-INDGERHQVAARLHEDGHAWLSVDG 236
D+ L + G V L DLG G+ + + NDG+ H V+ + E+ H + +DG
Sbjct: 757 DFMALELSDGGVKLSVDLGSGVGQWITESSNYNDGKWHTVSI-VREEKHVKIMIDG 811
Score = 28.7 bits (61), Expect = 5.7
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +3
Query: 72 DYFLLRIERGFVVLEWDLGGGLSSIVVDVPINDG 173
DY IE G + DLG + + +D P+NDG
Sbjct: 565 DYVAAEIEYGRPKITVDLGDAPAVVKLDTPVNDG 598
Score = 28.3 bits (60), Expect = 7.5
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = +3
Query: 72 DYFLLRIERGFVVLEWDLGGGLSSIVVDVPINDGERHQV 188
D+ + +E G VV +D G G I D I DG H +
Sbjct: 1204 DHIAVMLEHGRVVFTYDTGSGQVIIKSDKSIIDGRWHTI 1242
>AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha
chain protein.
Length = 3704
Score = 32.7 bits (71), Expect = 0.35
Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = +3
Query: 72 DYFLLRIERGFVVLEWDLGGGLSSIVVDVP-INDGERHQVAARLHEDGHAWLSVDG 236
D+ L + G V L DLG G+ + + NDG+ H V+ + E+ H + +DG
Sbjct: 2943 DFMALELSDGGVKLSVDLGSGVGQWITESSNYNDGKWHTVSI-VREEKHVKIMIDG 2997
Score = 28.7 bits (61), Expect = 5.7
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +3
Query: 72 DYFLLRIERGFVVLEWDLGGGLSSIVVDVPINDG 173
DY IE G + DLG + + +D P+NDG
Sbjct: 2751 DYVAAEIEYGRPKITVDLGDAPAVVKLDTPVNDG 2784
Score = 28.3 bits (60), Expect = 7.5
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = +3
Query: 72 DYFLLRIERGFVVLEWDLGGGLSSIVVDVPINDGERHQV 188
D+ + +E G VV +D G G I D I DG H +
Sbjct: 3390 DHIAVMLEHGRVVFTYDTGSGQVIIKSDKSIIDGRWHTI 3428
>AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha
protein.
Length = 3704
Score = 32.7 bits (71), Expect = 0.35
Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = +3
Query: 72 DYFLLRIERGFVVLEWDLGGGLSSIVVDVP-INDGERHQVAARLHEDGHAWLSVDG 236
D+ L + G V L DLG G+ + + NDG+ H V+ + E+ H + +DG
Sbjct: 2943 DFMALELSDGGVKLSVDLGSGVGQWITESSNYNDGKWHTVSI-VREEKHVKIMIDG 2997
Score = 28.7 bits (61), Expect = 5.7
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +3
Query: 72 DYFLLRIERGFVVLEWDLGGGLSSIVVDVPINDG 173
DY IE G + DLG + + +D P+NDG
Sbjct: 2751 DYVAAEIEYGRPKITVDLGDAPAVVKLDTPVNDG 2784
Score = 28.3 bits (60), Expect = 7.5
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = +3
Query: 72 DYFLLRIERGFVVLEWDLGGGLSSIVVDVPINDGERHQV 188
D+ + +E G VV +D G G I D I DG H +
Sbjct: 3390 DHIAVMLEHGRVVFTYDTGSGQVIIKSDKSIIDGRWHTI 3428
>Z35662-1|CAA84721.1| 4307|Caenorhabditis elegans Hypothetical protein
F25F2.2 protein.
Length = 4307
Score = 31.9 bits (69), Expect = 0.61
Identities = 15/60 (25%), Positives = 30/60 (50%)
Frame = +3
Query: 12 TTNDGVLAYQREGQAPPNEGDYFLLRIERGFVVLEWDLGGGLSSIVVDVPINDGERHQVA 191
TT++G++ + R + D+ +LR+ G W+ G G + + DG+ H++A
Sbjct: 3768 TTHNGIIMWSR------GKRDFHMLRLVNGTPEYHWNAGTGTGIVTSKTSVVDGQWHRIA 3821
>Z35599-4|CAA84661.1| 4307|Caenorhabditis elegans Hypothetical protein
F25F2.2 protein.
Length = 4307
Score = 31.9 bits (69), Expect = 0.61
Identities = 15/60 (25%), Positives = 30/60 (50%)
Frame = +3
Query: 12 TTNDGVLAYQREGQAPPNEGDYFLLRIERGFVVLEWDLGGGLSSIVVDVPINDGERHQVA 191
TT++G++ + R + D+ +LR+ G W+ G G + + DG+ H++A
Sbjct: 3768 TTHNGIIMWSR------GKRDFHMLRLVNGTPEYHWNAGTGTGIVTSKTSVVDGQWHRIA 3821
>Z34802-10|CAA84339.1| 4307|Caenorhabditis elegans Hypothetical
protein F25F2.2 protein.
Length = 4307
Score = 31.9 bits (69), Expect = 0.61
Identities = 15/60 (25%), Positives = 30/60 (50%)
Frame = +3
Query: 12 TTNDGVLAYQREGQAPPNEGDYFLLRIERGFVVLEWDLGGGLSSIVVDVPINDGERHQVA 191
TT++G++ + R + D+ +LR+ G W+ G G + + DG+ H++A
Sbjct: 3768 TTHNGIIMWSR------GKRDFHMLRLVNGTPEYHWNAGTGTGIVTSKTSVVDGQWHRIA 3821
>Z75553-6|CAA99951.1| 534|Caenorhabditis elegans Hypothetical
protein ZC443.6 protein.
Length = 534
Score = 31.1 bits (67), Expect = 1.1
Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 4/39 (10%)
Frame = +2
Query: 260 GISNVMNADSNIYIGGIPSWLN----IHGYPGFIGCIEN 364
GI +V+NADS +Y+GG+ L I YPG I++
Sbjct: 161 GIRSVINADSTLYMGGMKGALGEPAAISYYPGLFSSIDD 199
>Z75529-9|CAA99789.1| 534|Caenorhabditis elegans Hypothetical
protein ZC443.6 protein.
Length = 534
Score = 31.1 bits (67), Expect = 1.1
Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 4/39 (10%)
Frame = +2
Query: 260 GISNVMNADSNIYIGGIPSWLN----IHGYPGFIGCIEN 364
GI +V+NADS +Y+GG+ L I YPG I++
Sbjct: 161 GIRSVINADSTLYMGGMKGALGEPAAISYYPGLFSSIDD 199
>Z81125-10|CAB03385.3| 3102|Caenorhabditis elegans Hypothetical
protein T22A3.8 protein.
Length = 3102
Score = 30.3 bits (65), Expect = 1.9
Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Frame = +3
Query: 30 LAYQREGQAPPNEGDYFLLRIERGFVVLEWDLGGG-LSSIVVDVPINDGERHQVAARLHE 206
L Y R +A GD+ + + G V+ + +LGGG ++ + NDG+ H V A +
Sbjct: 2504 LLYFRGSEA---SGDFVAIYLNDGKVMFKINLGGGSVAELTSQNVYNDGKEHTVKA-IRT 2559
Query: 207 DGHAWLSVD 233
+L VD
Sbjct: 2560 GSEMYLQVD 2568
>AL008585-1|CAA15432.3| 3102|Caenorhabditis elegans Hypothetical
protein T22A3.8 protein.
Length = 3102
Score = 30.3 bits (65), Expect = 1.9
Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Frame = +3
Query: 30 LAYQREGQAPPNEGDYFLLRIERGFVVLEWDLGGG-LSSIVVDVPINDGERHQVAARLHE 206
L Y R +A GD+ + + G V+ + +LGGG ++ + NDG+ H V A +
Sbjct: 2504 LLYFRGSEA---SGDFVAIYLNDGKVMFKINLGGGSVAELTSQNVYNDGKEHTVKA-IRT 2559
Query: 207 DGHAWLSVD 233
+L VD
Sbjct: 2560 GSEMYLQVD 2568
>AF074902-1|AAC26793.1| 3102|Caenorhabditis elegans laminin alpha
chain protein.
Length = 3102
Score = 30.3 bits (65), Expect = 1.9
Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Frame = +3
Query: 30 LAYQREGQAPPNEGDYFLLRIERGFVVLEWDLGGG-LSSIVVDVPINDGERHQVAARLHE 206
L Y R +A GD+ + + G V+ + +LGGG ++ + NDG+ H V A +
Sbjct: 2504 LLYFRGSEA---SGDFVAIYLNDGKVMFKINLGGGSVAELTSQNVYNDGKEHTVKA-IRT 2559
Query: 207 DGHAWLSVD 233
+L VD
Sbjct: 2560 GSEMYLQVD 2568
>AF106573-7|AAC78158.1| 838|Caenorhabditis elegans Hypothetical
protein F52D2.6 protein.
Length = 838
Score = 29.1 bits (62), Expect = 4.3
Identities = 15/51 (29%), Positives = 23/51 (45%)
Frame = -3
Query: 540 YLKYTMHSSFIKRRDFLLNYFVVFVSMNSNQESLHSCVFRPATAVSRKFKH 388
YLK S + + + +++ F N SLH F P TA+ K K+
Sbjct: 9 YLKSGADSGVVTKFKNKIEFYIFFFFGNWKNFSLHQIKFEPITALDYKVKY 59
>Z81479-1|CAB03944.1| 1043|Caenorhabditis elegans Hypothetical
protein C34F6.1 protein.
Length = 1043
Score = 28.3 bits (60), Expect = 7.5
Identities = 12/28 (42%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
Frame = -2
Query: 259 GGGALLSTPSTESQAC-PSSCRRAATWC 179
G G +L TP+ E + C PSS ++ WC
Sbjct: 520 GSGTMLMTPTNEPRTCSPSSPCPSSHWC 547
>Z69788-8|CAA93644.3| 483|Caenorhabditis elegans Hypothetical
protein F09A5.1 protein.
Length = 483
Score = 28.3 bits (60), Expect = 7.5
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +1
Query: 46 KDKLRLTKAITSY*ELKEVSSYSNGTWAVDFLP*SSMF 159
+D RL + +T + SY+NG WA D L SS F
Sbjct: 446 RDARRLVREMTRNESDDQEKSYTNGIWADDCLTHSSKF 483
>Z69636-1|CAA93465.2| 1180|Caenorhabditis elegans Hypothetical
protein F20B10.1 protein.
Length = 1180
Score = 28.3 bits (60), Expect = 7.5
Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Frame = +3
Query: 63 NEGDYFLLRIERGFVVLEWDLGG-GLSSIVVDVPINDGERHQVAARLHEDGHAWLSVDGV 239
++GD + +I G V + +D G S I ++DG H++ LH+ LS+DGV
Sbjct: 168 DQGDVLIAQIIHGTVHVIFDFGSLTPSRISAGKALDDGRWHEM-RWLHQFDSVQLSIDGV 226
>AF016681-12|AAB66170.2| 325|Caenorhabditis elegans Serpentine
receptor, class i protein47 protein.
Length = 325
Score = 27.9 bits (59), Expect = 9.9
Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = +2
Query: 263 ISNVMNADSNIYIGGIPSWLNIHGYPG-FIGCIENVETTDSHRCLNLRDTAVAGRN 427
ISN+M DSN+++ G+ L I G+ G +G I + T D + L V+ +N
Sbjct: 179 ISNLMFFDSNLWLTGV---LFISGFGGCLLGAIVTMTTLDMFKMLGELRRKVSFKN 231
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,460,097
Number of Sequences: 27780
Number of extensions: 364727
Number of successful extensions: 938
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 863
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 935
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2171433726
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -