Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40063
(587 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q3UA25 Cluster: Bone marrow macrophage cDNA, RIKEN full... 161 8e-39
UniRef50_P62241 Cluster: 40S ribosomal protein S8; n=93; Eukaryo... 161 8e-39
UniRef50_Q8MLY8 Cluster: 40S ribosomal protein S8; n=82; Eukaryo... 146 3e-34
UniRef50_Q4N3P0 Cluster: 40S ribosomal protein S8; n=4; Eukaryot... 140 3e-32
UniRef50_Q5JR95 Cluster: Ribosomal protein S8; n=8; Euteleostomi... 139 5e-32
UniRef50_Q08069 Cluster: 40S ribosomal protein S8; n=21; Eukaryo... 132 8e-30
UniRef50_P25204 Cluster: 40S ribosomal protein S8; n=19; Eukaryo... 121 1e-26
UniRef50_Q6QP50 Cluster: Putative 40S ribosomal protein S8; n=1;... 118 1e-25
UniRef50_UPI000049933B Cluster: conserved hypothetical protein; ... 104 1e-21
UniRef50_Q7R1W8 Cluster: Ribosomal protein S8; n=1; Giardia lamb... 98 2e-19
UniRef50_Q5C1R4 Cluster: SJCHGC03085 protein; n=1; Schistosoma j... 88 1e-16
UniRef50_A6RAQ0 Cluster: Ribosomal protein S8; n=1; Ajellomyces ... 85 9e-16
UniRef50_Q8SWC9 Cluster: Ribosomal protein S8; n=1; Encephalitoz... 81 1e-14
UniRef50_Q9AW20 Cluster: 40S ribosomal protein S8; n=1; Guillard... 76 5e-13
UniRef50_Q4SV68 Cluster: Chromosome undetermined SCAF13783, whol... 69 8e-11
UniRef50_A3CSQ2 Cluster: 30S ribosomal protein S8e; n=5; Archaea... 61 2e-08
UniRef50_Q3LVX9 Cluster: Ribosomal protein S8; n=1; Bigelowiella... 59 7e-08
UniRef50_Q6L0D3 Cluster: 30S ribosomal protein S8e; n=7; Archaea... 58 2e-07
UniRef50_Q9HJD0 Cluster: 30S ribosomal protein S8e; n=5; Euryarc... 51 2e-05
UniRef50_A7Q5T2 Cluster: Chromosome chr14 scaffold_54, whole gen... 49 7e-05
UniRef50_O58830 Cluster: 30S ribosomal protein S8e; n=6; Archaea... 49 9e-05
UniRef50_Q980W3 Cluster: 30S ribosomal protein S8e; n=4; Archaea... 47 4e-04
UniRef50_Q0W1L5 Cluster: 30S ribosomal protein S8e; n=3; Euryarc... 46 7e-04
UniRef50_Q2NEU6 Cluster: 30S ribosomal protein S8e; n=1; Methano... 44 0.002
UniRef50_P61300 Cluster: 30S ribosomal protein S8e; n=5; Methano... 44 0.003
UniRef50_Q9YDY0 Cluster: 30S ribosomal protein S8e; n=3; Desulfu... 44 0.003
UniRef50_Q8TV55 Cluster: 30S ribosomal protein S8e; n=1; Methano... 39 0.100
UniRef50_A0RXG5 Cluster: Ribosomal protein S8E; n=2; Thermoprote... 36 0.70
UniRef50_A1FCF6 Cluster: Monooxygenase, FAD-binding; n=4; Pseudo... 34 2.1
UniRef50_A5ASW3 Cluster: Putative uncharacterized protein; n=1; ... 34 2.8
UniRef50_UPI0000F2B19F Cluster: PREDICTED: hypothetical protein;... 33 4.9
UniRef50_Q8TN82 Cluster: Predicted protein; n=1; Methanosarcina ... 33 4.9
UniRef50_P19214 Cluster: Erythrocyte-binding antigen 175; n=89; ... 33 4.9
UniRef50_Q0VMR6 Cluster: Putative uncharacterized protein; n=1; ... 32 8.6
UniRef50_A5BWY7 Cluster: Putative uncharacterized protein; n=1; ... 32 8.6
UniRef50_Q962J8 Cluster: PV1H14180_P; n=2; Plasmodium vivax|Rep:... 32 8.6
UniRef50_Q16EJ7 Cluster: Putative uncharacterized protein; n=2; ... 32 8.6
UniRef50_A7F1W3 Cluster: Putative uncharacterized protein; n=1; ... 32 8.6
>UniRef50_Q3UA25 Cluster: Bone marrow macrophage cDNA, RIKEN
full-length enriched library, clone:I830031J02
product:ribosomal protein S8, full insert sequence; n=9;
Deuterostomia|Rep: Bone marrow macrophage cDNA, RIKEN
full-length enriched library, clone:I830031J02
product:ribosomal protein S8, full insert sequence - Mus
musculus (Mouse)
Length = 152
Score = 161 bits (392), Expect = 8e-39
Identities = 73/85 (85%), Positives = 80/85 (94%)
Frame = +1
Query: 1 KRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVY 180
KRKYELGRPAANT++GP+RIH+VR RGGN KYRALRLD GNFSWGSEC TRKTRIIDVVY
Sbjct: 24 KRKYELGRPAANTKIGPRRIHTVRVRGGNKKYRALRLDVGNFSWGSECCTRKTRIIDVVY 83
Query: 181 NASNNELVRTKTLVKNAIVVVDATP 255
NASNNELVRTKTLVKN IV++D+TP
Sbjct: 84 NASNNELVRTKTLVKNCIVLIDSTP 108
Score = 73.3 bits (172), Expect = 4e-12
Identities = 34/51 (66%), Positives = 39/51 (76%), Gaps = 2/51 (3%)
Frame = +3
Query: 231 NCCSRCNS--FRQWYESHYTLPLGRKKGAKLTEAEEAIINKKRSQKTARKY 377
NC +S +RQWYESHY LPLGRKKGAKLT EE I+NKKRS+K +KY
Sbjct: 99 NCIVLIDSTPYRQWYESHYALPLGRKKGAKLTPEEEEILNKKRSKKIQKKY 149
>UniRef50_P62241 Cluster: 40S ribosomal protein S8; n=93;
Eukaryota|Rep: 40S ribosomal protein S8 - Homo sapiens
(Human)
Length = 208
Score = 161 bits (392), Expect = 8e-39
Identities = 73/85 (85%), Positives = 80/85 (94%)
Frame = +1
Query: 1 KRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVY 180
KRKYELGRPAANT++GP+RIH+VR RGGN KYRALRLD GNFSWGSEC TRKTRIIDVVY
Sbjct: 24 KRKYELGRPAANTKIGPRRIHTVRVRGGNKKYRALRLDVGNFSWGSECCTRKTRIIDVVY 83
Query: 181 NASNNELVRTKTLVKNAIVVVDATP 255
NASNNELVRTKTLVKN IV++D+TP
Sbjct: 84 NASNNELVRTKTLVKNCIVLIDSTP 108
Score = 139 bits (336), Expect = 5e-32
Identities = 64/95 (67%), Positives = 75/95 (78%), Gaps = 2/95 (2%)
Frame = +3
Query: 231 NCCSRCNS--FRQWYESHYTLPLGRKKGAKLTEAEEAIINKKRSQKTARKYLARQRLAKV 404
NC +S +RQWYESHY LPLGRKKGAKLT EE I+NKKRS+K +KY R++ AK+
Sbjct: 99 NCIVLIDSTPYRQWYESHYALPLGRKKGAKLTPEEEEILNKKRSKKIQKKYDERKKNAKI 158
Query: 405 EGALEEQFHTGRLLACVASRPGQCGRADGYILEGK 509
LEEQF G+LLAC+ASRPGQCGRADGY+LEGK
Sbjct: 159 SSLLEEQFQQGKLLACIASRPGQCGRADGYVLEGK 193
>UniRef50_Q8MLY8 Cluster: 40S ribosomal protein S8; n=82;
Eukaryota|Rep: 40S ribosomal protein S8 - Drosophila
melanogaster (Fruit fly)
Length = 208
Score = 146 bits (354), Expect = 3e-34
Identities = 68/85 (80%), Positives = 76/85 (89%)
Frame = +1
Query: 1 KRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVY 180
KRK+ELGRPAANT+LG R+H VR+RGGNTK RALRL+TGNF+W SE RKTRI DVVY
Sbjct: 24 KRKFELGRPAANTKLGSGRVHKVRTRGGNTKLRALRLETGNFAWASEGVARKTRIADVVY 83
Query: 181 NASNNELVRTKTLVKNAIVVVDATP 255
NASNNELVRTKTLVKN+IVV+DATP
Sbjct: 84 NASNNELVRTKTLVKNSIVVIDATP 108
Score = 126 bits (303), Expect = 5e-28
Identities = 55/87 (63%), Positives = 70/87 (80%), Gaps = 2/87 (2%)
Frame = +3
Query: 255 FRQWYESHYTLPLGRKKGAKLTEAEEA--IINKKRSQKTARKYLARQRLAKVEGALEEQF 428
FRQWYE+HY LPLGRK+ K + E+ ++ KKRS+K +KYL RQ+ KVE ALE+QF
Sbjct: 109 FRQWYEAHYVLPLGRKRNPKHAQKEDENDVLTKKRSEKVMKKYLERQKYGKVEQALEDQF 168
Query: 429 HTGRLLACVASRPGQCGRADGYILEGK 509
+GR+LAC++SRPGQCGR+DGYILEGK
Sbjct: 169 TSGRILACISSRPGQCGRSDGYILEGK 195
>UniRef50_Q4N3P0 Cluster: 40S ribosomal protein S8; n=4;
Eukaryota|Rep: 40S ribosomal protein S8 - Theileria
parva
Length = 188
Score = 140 bits (338), Expect = 3e-32
Identities = 64/85 (75%), Positives = 75/85 (88%)
Frame = +1
Query: 1 KRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVY 180
KRKYELGRP++NT+LG + + VR RGGN K+RALRLD+GNFSWGS+ TRKTR++DVVY
Sbjct: 24 KRKYELGRPSSNTKLGSKLVRKVRCRGGNLKFRALRLDSGNFSWGSQNVTRKTRVMDVVY 83
Query: 181 NASNNELVRTKTLVKNAIVVVDATP 255
NAS+NELVRTKTLVKNAIV VD TP
Sbjct: 84 NASSNELVRTKTLVKNAIVTVDPTP 108
Score = 62.9 bits (146), Expect = 5e-09
Identities = 38/85 (44%), Positives = 51/85 (60%)
Frame = +3
Query: 255 FRQWYESHYTLPLGRKKGAKLTEAEEAIINKKRSQKTARKYLARQRLAKVEGALEEQFHT 434
F+ W+++HY L LG K +E +A S+K A A V L +QF +
Sbjct: 109 FKLWFKTHYGLELG-----KSSEDPQA------SEKVA---------ALVPRTLLDQFSS 148
Query: 435 GRLLACVASRPGQCGRADGYILEGK 509
GRLLAC++SRPGQCGR DGY+LEG+
Sbjct: 149 GRLLACISSRPGQCGRCDGYVLEGE 173
>UniRef50_Q5JR95 Cluster: Ribosomal protein S8; n=8;
Euteleostomi|Rep: Ribosomal protein S8 - Homo sapiens
(Human)
Length = 188
Score = 139 bits (336), Expect = 5e-32
Identities = 64/95 (67%), Positives = 75/95 (78%), Gaps = 2/95 (2%)
Frame = +3
Query: 231 NCCSRCNS--FRQWYESHYTLPLGRKKGAKLTEAEEAIINKKRSQKTARKYLARQRLAKV 404
NC +S +RQWYESHY LPLGRKKGAKLT EE I+NKKRS+K +KY R++ AK+
Sbjct: 79 NCIVLIDSTPYRQWYESHYALPLGRKKGAKLTPEEEEILNKKRSKKIQKKYDERKKNAKI 138
Query: 405 EGALEEQFHTGRLLACVASRPGQCGRADGYILEGK 509
LEEQF G+LLAC+ASRPGQCGRADGY+LEGK
Sbjct: 139 SSLLEEQFQQGKLLACIASRPGQCGRADGYVLEGK 173
Score = 101 bits (242), Expect = 1e-20
Identities = 56/85 (65%), Positives = 63/85 (74%)
Frame = +1
Query: 1 KRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVY 180
KRKYELGRPAANT++GP+RIH+VR RGG C TRKTRIIDVVY
Sbjct: 24 KRKYELGRPAANTKIGPRRIHTVRVRGG-------------------C-TRKTRIIDVVY 63
Query: 181 NASNNELVRTKTLVKNAIVVVDATP 255
NASNNELVRTKTLVKN IV++D+TP
Sbjct: 64 NASNNELVRTKTLVKNCIVLIDSTP 88
>UniRef50_Q08069 Cluster: 40S ribosomal protein S8; n=21;
Eukaryota|Rep: 40S ribosomal protein S8 - Zea mays
(Maize)
Length = 221
Score = 132 bits (318), Expect = 8e-30
Identities = 64/86 (74%), Positives = 72/86 (83%), Gaps = 1/86 (1%)
Frame = +1
Query: 1 KRKYELGRPAANTRLGPQR-IHSVRSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVV 177
KRKYELGR ANT+L + + VR RGGN K+RALRLDTGN+SWGSE TRKTRI+DVV
Sbjct: 24 KRKYELGRQPANTKLSSNKTVRRVRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVV 83
Query: 178 YNASNNELVRTKTLVKNAIVVVDATP 255
YNASNNELVRT+TLVK+AIV VDA P
Sbjct: 84 YNASNNELVRTQTLVKSAIVQVDAAP 109
Score = 90.2 bits (214), Expect = 3e-17
Identities = 46/93 (49%), Positives = 59/93 (63%), Gaps = 8/93 (8%)
Frame = +3
Query: 255 FRQWYESHYTLPLGRKK--------GAKLTEAEEAIINKKRSQKTARKYLARQRLAKVEG 410
F+QWY +HY + +GRKK A+ E E A K+S RK R+ ++
Sbjct: 110 FKQWYLTHYGVDIGRKKKTPAAKKDNAEGQEVEAAAEETKKSNHVTRKLEKRKEGRTLDP 169
Query: 411 ALEEQFHTGRLLACVASRPGQCGRADGYILEGK 509
+EEQF +GRLLAC++SRPGQCGRADGYILEGK
Sbjct: 170 HIEEQFGSGRLLACISSRPGQCGRADGYILEGK 202
>UniRef50_P25204 Cluster: 40S ribosomal protein S8; n=19;
Eukaryota|Rep: 40S ribosomal protein S8 - Leishmania
major
Length = 220
Score = 121 bits (292), Expect = 1e-26
Identities = 57/85 (67%), Positives = 67/85 (78%)
Frame = +1
Query: 1 KRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVY 180
+ K ELGR ANTRLG +R+ VR+RGGN K RALRLDTGNF+W SE + R++DVVY
Sbjct: 24 RMKAELGRLPANTRLGARRVSPVRARGGNFKIRALRLDTGNFAWASEAIAHRVRLLDVVY 83
Query: 181 NASNNELVRTKTLVKNAIVVVDATP 255
NA++NELVRTKTLVKN IV VDA P
Sbjct: 84 NATSNELVRTKTLVKNCIVAVDAAP 108
Score = 63.7 bits (148), Expect = 3e-09
Identities = 40/97 (41%), Positives = 53/97 (54%), Gaps = 13/97 (13%)
Frame = +3
Query: 255 FRQWYESHYTLPLGR-KKGAKLTEAEE--------AIINK----KRSQKTARKYLARQRL 395
F++WY HY + L KK K A E A +K K S K R++ R+R
Sbjct: 109 FKRWYAKHYGIDLDADKKSTKAAVAAEKKGRKSAHAAADKYDVNKASPKLQREWTRRRRN 168
Query: 396 AKVEGALEEQFHTGRLLACVASRPGQCGRADGYILEG 506
+VE A+ +Q GR+LA + SRPGQ GRADG +LEG
Sbjct: 169 HRVEKAIADQLREGRVLARITSRPGQSGRADGILLEG 205
>UniRef50_Q6QP50 Cluster: Putative 40S ribosomal protein S8; n=1;
Zea mays|Rep: Putative 40S ribosomal protein S8 - Zea
mays (Maize)
Length = 245
Score = 118 bits (283), Expect = 1e-25
Identities = 58/83 (69%), Positives = 67/83 (80%), Gaps = 1/83 (1%)
Frame = +1
Query: 10 YELGRPAANTRLGPQR-IHSVRSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNA 186
YELGR ANT+L + + VR RGGNTK+RALR DT N+SWGSE TRKTRI+DVVY A
Sbjct: 124 YELGRQPANTKLSSNKTVRRVRVRGGNTKWRALRFDTCNYSWGSEALTRKTRILDVVYIA 183
Query: 187 SNNELVRTKTLVKNAIVVVDATP 255
+NNELVRT+TLVK+AIV VDA P
Sbjct: 184 TNNELVRTQTLVKSAIVQVDAAP 206
>UniRef50_UPI000049933B Cluster: conserved hypothetical protein;
n=3; Entamoeba histolytica HM-1:IMSS|Rep: conserved
hypothetical protein - Entamoeba histolytica HM-1:IMSS
Length = 237
Score = 104 bits (250), Expect = 1e-21
Identities = 49/85 (57%), Positives = 62/85 (72%)
Frame = +1
Query: 1 KRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVY 180
K+K +GR ANTRLG R+H VR R G K RALRL+ GNFSW S+ T+ T+I++VVY
Sbjct: 24 KKKNTMGRQPANTRLGAIRVHDVRCRYGIIKRRALRLENGNFSWASQSITKGTKILNVVY 83
Query: 181 NASNNELVRTKTLVKNAIVVVDATP 255
NAS+N+ VRT TLVK AI+ +D P
Sbjct: 84 NASDNDFVRTNTLVKGAIIEIDPAP 108
Score = 60.5 bits (140), Expect = 3e-08
Identities = 31/67 (46%), Positives = 43/67 (64%), Gaps = 1/67 (1%)
Frame = +3
Query: 312 KLTEAEEAIIN-KKRSQKTARKYLARQRLAKVEGALEEQFHTGRLLACVASRPGQCGRAD 488
++ E + A++N K QK K L + K + AL E F +GR+LAC++SRPGQ G +
Sbjct: 157 QIAETQVALMNPSKTMQKKYAKKLEVLKNMKFDEALLEGFQSGRVLACISSRPGQTGSVE 216
Query: 489 GYILEGK 509
GYILEGK
Sbjct: 217 GYILEGK 223
>UniRef50_Q7R1W8 Cluster: Ribosomal protein S8; n=1; Giardia lamblia
ATCC 50803|Rep: Ribosomal protein S8 - Giardia lamblia
ATCC 50803
Length = 174
Score = 97.9 bits (233), Expect = 2e-19
Identities = 51/100 (51%), Positives = 66/100 (66%), Gaps = 9/100 (9%)
Frame = +1
Query: 1 KRKYELGRPAANTRL---------GPQRIHSVRSRGGNTKYRALRLDTGNFSWGSECSTR 153
KRKY LGR ANT+L Q+I ++R RGGN K RALRL G+F+WGS +
Sbjct: 24 KRKYNLGRQPANTKLIVKVTSKKNEGQKISTIRCRGGNIKRRALRLSHGSFAWGSADISH 83
Query: 154 KTRIIDVVYNASNNELVRTKTLVKNAIVVVDATPSGSGMS 273
K RI+ VVYN+++NELVRT TLVK +V +D+ P S +S
Sbjct: 84 KARILQVVYNSTSNELVRTNTLVKGCVVQIDSAPFKSALS 123
Score = 39.5 bits (88), Expect = 0.057
Identities = 17/29 (58%), Positives = 21/29 (72%)
Frame = +3
Query: 420 EQFHTGRLLACVASRPGQCGRADGYILEG 506
+Q +LA ++SRPGQ G ADGYILEG
Sbjct: 133 DQIRGDHILARISSRPGQVGTADGYILEG 161
>UniRef50_Q5C1R4 Cluster: SJCHGC03085 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC03085 protein - Schistosoma
japonicum (Blood fluke)
Length = 120
Score = 88.2 bits (209), Expect = 1e-16
Identities = 48/94 (51%), Positives = 62/94 (65%), Gaps = 9/94 (9%)
Frame = +3
Query: 255 FRQWYESHYTLPLGR-----KKGAKLT--EAEEAIINKKRSQKTARKYLARQRL--AKVE 407
FRQW+E+ Y LG KKG +T EE + KKRS+ +K+ RQ L A VE
Sbjct: 12 FRQWFEAPYLKELGPPKVVCKKGPSVTPENPEEDFLLKKRSKSALKKFETRQALPQANVE 71
Query: 408 GALEEQFHTGRLLACVASRPGQCGRADGYILEGK 509
+L+E+F TGRLLAC++S+PGQ GRADGY+ EGK
Sbjct: 72 ESLKEEFVTGRLLACISSKPGQVGRADGYLFEGK 105
>UniRef50_A6RAQ0 Cluster: Ribosomal protein S8; n=1; Ajellomyces
capsulatus NAm1|Rep: Ribosomal protein S8 - Ajellomyces
capsulatus NAm1
Length = 141
Score = 85.4 bits (202), Expect = 9e-16
Identities = 38/58 (65%), Positives = 46/58 (79%)
Frame = +1
Query: 1 KRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDV 174
KR +E GR ANTR+GP+RIH VR+RGGN K+R LRL++GNFSWGSE RK R+I V
Sbjct: 24 KRAFEKGRQPANTRIGPKRIHLVRTRGGNQKFRGLRLESGNFSWGSEGIARKVRVIVV 81
Score = 62.1 bits (144), Expect = 9e-09
Identities = 35/72 (48%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Frame = +3
Query: 297 RKKGAKLTEAEEAIINKKRSQKTARKYLAR-QRLAKVEGALEEQFHTGRLLACVASRPGQ 473
R + + E I K R +K AR KVE ALE+QF GRL A V+SRPGQ
Sbjct: 59 RLESGNFSWGSEGIARKVRVIVVEKKQAARFAAQGKVEPALEKQFEAGRLYAVVSSRPGQ 118
Query: 474 CGRADGYILEGK 509
GR DGYILEG+
Sbjct: 119 SGRVDGYILEGE 130
>UniRef50_Q8SWC9 Cluster: Ribosomal protein S8; n=1; Encephalitozoon
cuniculi|Rep: Ribosomal protein S8 - Encephalitozoon
cuniculi
Length = 173
Score = 81.4 bits (192), Expect = 1e-14
Identities = 37/85 (43%), Positives = 57/85 (67%)
Frame = +1
Query: 1 KRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVY 180
KR G ++T++G +++ VR RGGN KY+ALRLD G+F + + R +++ VVY
Sbjct: 24 KRNNRAGSQPSSTKIGERKVTPVRVRGGNRKYKALRLDMGHFKFITTGKFRMAKLLQVVY 83
Query: 181 NASNNELVRTKTLVKNAIVVVDATP 255
+ S+NELVRT TL K+++V + A P
Sbjct: 84 HPSSNELVRTNTLTKSSVVKISAEP 108
Score = 41.1 bits (92), Expect = 0.019
Identities = 17/35 (48%), Positives = 23/35 (65%)
Frame = +3
Query: 402 VEGALEEQFHTGRLLACVASRPGQCGRADGYILEG 506
V+ +L E F G L A + SRPGQ G A G++L+G
Sbjct: 120 VDPSLHESFEKGHLYAIITSRPGQVGMAQGHVLQG 154
>UniRef50_Q9AW20 Cluster: 40S ribosomal protein S8; n=1; Guillardia
theta|Rep: 40S ribosomal protein S8 - Guillardia theta
(Cryptomonas phi)
Length = 178
Score = 76.2 bits (179), Expect = 5e-13
Identities = 39/82 (47%), Positives = 53/82 (64%)
Frame = +1
Query: 1 KRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVY 180
KR + GR +NT++G + + +R RGG K RAL L GNFS+ S T K +I+ V +
Sbjct: 24 KRNHAKGRQPSNTKIGRRCVVKLRVRGGGVKTRALFLSYGNFSFVSIQRTFKAKILSVAF 83
Query: 181 NASNNELVRTKTLVKNAIVVVD 246
N S+NELVRT TL K +IV +D
Sbjct: 84 NESSNELVRTNTLTKGSIVYLD 105
Score = 46.0 bits (104), Expect = 7e-04
Identities = 20/32 (62%), Positives = 26/32 (81%)
Frame = +3
Query: 414 LEEQFHTGRLLACVASRPGQCGRADGYILEGK 509
L +Q +G++LA + SRPGQ GRADGYILEG+
Sbjct: 135 LIDQILSGKILARICSRPGQSGRADGYILEGQ 166
>UniRef50_Q4SV68 Cluster: Chromosome undetermined SCAF13783, whole
genome shotgun sequence; n=2; Coelomata|Rep: Chromosome
undetermined SCAF13783, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 149
Score = 68.9 bits (161), Expect = 8e-11
Identities = 34/71 (47%), Positives = 41/71 (57%)
Frame = +3
Query: 297 RKKGAKLTEAEEAIINKKRSQKTARKYLARQRLAKVEGALEEQFHTGRLLACVASRPGQC 476
R+ + T EE ++NKKRS+KT +KY R AC+ASRPGQC
Sbjct: 64 RRAPSWYTPEEEEVLNKKRSKKTQKKYDERXXXXXXXXXXXXXXXXXXXXACIASRPGQC 123
Query: 477 GRADGYILEGK 509
GRADGYILEGK
Sbjct: 124 GRADGYILEGK 134
>UniRef50_A3CSQ2 Cluster: 30S ribosomal protein S8e; n=5;
Archaea|Rep: 30S ribosomal protein S8e - Methanoculleus
marisnigri (strain ATCC 35101 / DSM 1498 / JR1)
Length = 125
Score = 60.9 bits (141), Expect = 2e-08
Identities = 33/79 (41%), Positives = 47/79 (59%)
Frame = +1
Query: 1 KRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVY 180
K++ E+GR A T +G +R VR+ GGN K RALRL+ S + T+KT+I V
Sbjct: 22 KKRTEIGRAPAETHIGEERRRIVRTFGGNQKVRALRLEYATVSNPATGETKKTKIEAVEA 81
Query: 181 NASNNELVRTKTLVKNAIV 237
N+++ VR K L K AI+
Sbjct: 82 NSADPNYVRRKLLTKGAII 100
>UniRef50_Q3LVX9 Cluster: Ribosomal protein S8; n=1; Bigelowiella
natans|Rep: Ribosomal protein S8 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 176
Score = 59.3 bits (137), Expect = 7e-08
Identities = 29/86 (33%), Positives = 49/86 (56%), Gaps = 1/86 (1%)
Frame = +1
Query: 1 KRKYELGRPAANTRLGPQR-IHSVRSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVV 177
K+ + G NT L I R RGGN K++A+ L G+F W + ++ ++I+ V+
Sbjct: 17 KKNHSKGNNPTNTVLRRANFIKMTRVRGGNFKFKAISLGKGSFQWKTMQLSKNSKILSVL 76
Query: 178 YNASNNELVRTKTLVKNAIVVVDATP 255
YN +N +LV+ + L K I+ +D+ P
Sbjct: 77 YNQANLKLVQKRNLSKGTIIKIDSMP 102
>UniRef50_Q6L0D3 Cluster: 30S ribosomal protein S8e; n=7;
Archaea|Rep: 30S ribosomal protein S8e - Picrophilus
torridus
Length = 125
Score = 57.6 bits (133), Expect = 2e-07
Identities = 28/79 (35%), Positives = 45/79 (56%)
Frame = +1
Query: 1 KRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVY 180
KR+YELGR TRLG + + +RS GGN+K+ LR D N + +TRK +I V
Sbjct: 23 KRRYELGREPTLTRLGDRELRKIRSYGGNSKFALLRCDYANVYNPKDKTTRKVKINTVKE 82
Query: 181 NASNNELVRTKTLVKNAIV 237
N+++ V+ + + ++
Sbjct: 83 NSADPHYVQRNIMNRGTVI 101
>UniRef50_Q9HJD0 Cluster: 30S ribosomal protein S8e; n=5;
Euryarchaeota|Rep: 30S ribosomal protein S8e -
Thermoplasma acidophilum
Length = 127
Score = 50.8 bits (116), Expect = 2e-05
Identities = 28/83 (33%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Frame = +1
Query: 1 KRKYELGRPAANTRLGPQRIHSV-RSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVV 177
KR++ELGR T+LG + V R+ GGNTK +T N SE +K +II V
Sbjct: 23 KRRFELGREPTLTKLGTKTERKVIRTMGGNTKVILFTAETANVYDASEKKIKKAKIITVK 82
Query: 178 YNASNNELVRTKTLVKNAIVVVD 246
N +N+ V+ + K ++ +
Sbjct: 83 ANPANSHYVQRNIINKGTVIATE 105
>UniRef50_A7Q5T2 Cluster: Chromosome chr14 scaffold_54, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr14 scaffold_54, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 110
Score = 49.2 bits (112), Expect = 7e-05
Identities = 28/74 (37%), Positives = 42/74 (56%)
Frame = +3
Query: 249 NSFRQWYESHYTLPLGRKKGAKLTEAEEAIINKKRSQKTARKYLARQRLAKVEGALEEQF 428
N+ Q Y HY L +G KK A T ++ +++ RK RQ+ K++ +EEQF
Sbjct: 41 NAIIQRYLQHYGLDIGCKKKASTTPRKK----ERKGNHVVRKLEKRQQDHKLDPHIEEQF 96
Query: 429 HTGRLLACVASRPG 470
+GRLLA ++S PG
Sbjct: 97 GSGRLLAAISSYPG 110
>UniRef50_O58830 Cluster: 30S ribosomal protein S8e; n=6;
Archaea|Rep: 30S ribosomal protein S8e - Pyrococcus
horikoshii
Length = 127
Score = 48.8 bits (111), Expect = 9e-05
Identities = 30/80 (37%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
Frame = +1
Query: 1 KRKYELGRPAANTRLGPQ-RIHSVRSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVV 177
KRK ELGR +NTR+ Q + +R+ GGN K R N + RK RII V+
Sbjct: 23 KRKRELGREPSNTRVAEQDKRKIIRTYGGNRKVRLTAAAYANV-FDKSGKGRKVRIIRVL 81
Query: 178 YNASNNELVRTKTLVKNAIV 237
N +N + R + K AI+
Sbjct: 82 ENPANRQFARRNIITKGAII 101
>UniRef50_Q980W3 Cluster: 30S ribosomal protein S8e; n=4;
Archaea|Rep: 30S ribosomal protein S8e - Sulfolobus
solfataricus
Length = 133
Score = 46.8 bits (106), Expect = 4e-04
Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 1/84 (1%)
Frame = +1
Query: 1 KRKYELGRPAANTRLGPQRIH-SVRSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVV 177
KRKYE+G P T L + I R+ GGN K R T N + + +K +I++++
Sbjct: 23 KRKYEIGNPPTFTTLSAEDIRIKDRTLGGNFKVRLKYTTTANVLDPATNTAKKVKILEIL 82
Query: 178 YNASNNELVRTKTLVKNAIVVVDA 249
+N EL R +++ A + +A
Sbjct: 83 ETPANKELARRGIIIRGAKIRTEA 106
>UniRef50_Q0W1L5 Cluster: 30S ribosomal protein S8e; n=3;
Euryarchaeota|Rep: 30S ribosomal protein S8e -
Uncultured methanogenic archaeon RC-I
Length = 125
Score = 46.0 bits (104), Expect = 7e-04
Identities = 25/82 (30%), Positives = 38/82 (46%)
Frame = +1
Query: 1 KRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVY 180
KRK+ELGR +G Q++ + G +K R L+ D N + T+K ++ V
Sbjct: 22 KRKFELGRDFTIPVIGAQKLKVLNVTGNGSKVRVLKSDVVNVTDPKTGKTQKVKMTTVTE 81
Query: 181 NASNNELVRTKTLVKNAIVVVD 246
N +N VR L K V +
Sbjct: 82 NPANKNYVRRNFLTKGTFVTTE 103
>UniRef50_Q2NEU6 Cluster: 30S ribosomal protein S8e; n=1;
Methanosphaera stadtmanae DSM 3091|Rep: 30S ribosomal
protein S8e - Methanosphaera stadtmanae (strain DSM
3091)
Length = 126
Score = 44.4 bits (100), Expect = 0.002
Identities = 26/79 (32%), Positives = 39/79 (49%)
Frame = +1
Query: 1 KRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVY 180
KR E GR A TR+G + + +RG TK RA N + S++ ++ V+
Sbjct: 23 KRNAEFGRNPAETRIGDEVKKEIVARGNCTKTRATVAKRINVIDPKDNSSKNVEMLTVLE 82
Query: 181 NASNNELVRTKTLVKNAIV 237
N +N+ VR + K AIV
Sbjct: 83 NGANSHFVRRNIITKGAIV 101
>UniRef50_P61300 Cluster: 30S ribosomal protein S8e; n=5;
Methanococcus|Rep: 30S ribosomal protein S8e -
Methanococcus maripaludis
Length = 128
Score = 43.6 bits (98), Expect = 0.003
Identities = 24/80 (30%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
Frame = +1
Query: 1 KRKYELGRPAANTRLGPQ-RIHSVRSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVV 177
K K E+GRPAA T++ + + VR RG N K + + + N + +K + +V+
Sbjct: 23 KHKREMGRPAAETQVSDKIKRKIVRCRGANLKVKLEKTNYANVFDQANKVCKKVVVTNVI 82
Query: 178 YNASNNELVRTKTLVKNAIV 237
N +N +R + K AI+
Sbjct: 83 DNKANKHYIRRNVMTKGAII 102
>UniRef50_Q9YDY0 Cluster: 30S ribosomal protein S8e; n=3;
Desulfurococcales|Rep: 30S ribosomal protein S8e -
Aeropyrum pernix
Length = 136
Score = 43.6 bits (98), Expect = 0.003
Identities = 27/82 (32%), Positives = 40/82 (48%), Gaps = 3/82 (3%)
Frame = +1
Query: 1 KRKYELGRPAANTRLG---PQRIHSVRSRGGNTKYRALRLDTGNFSWGSECSTRKTRIID 171
KRKY GRP T L + VR+RGG+ K +A ++ S RK RI+
Sbjct: 24 KRKYAAGRPPTYTTLSAAEEEERKPVRARGGSYKIKAKKVAFAVVSNPKTGEARKARILR 83
Query: 172 VVYNASNNELVRTKTLVKNAIV 237
+V ++ E R +VK A++
Sbjct: 84 IVETPAHREYARRGIIVKGAVI 105
>UniRef50_Q8TV55 Cluster: 30S ribosomal protein S8e; n=1;
Methanopyrus kandleri|Rep: 30S ribosomal protein S8e -
Methanopyrus kandleri
Length = 133
Score = 38.7 bits (86), Expect = 0.100
Identities = 26/81 (32%), Positives = 40/81 (49%), Gaps = 2/81 (2%)
Frame = +1
Query: 1 KRKYELGRPAANTRLGPQR-IHSVRSRGGNTKYRALRLDT-GNFSWGSECSTRKTRIIDV 174
KRK+E+G P T +G +R + R GGN K + L+ T N + + RI +V
Sbjct: 23 KRKFEMGNPPTETLVGEERKLKERRGMGGNVK-KGLKFATHANVADPETGEVKCVRIEEV 81
Query: 175 VYNASNNELVRTKTLVKNAIV 237
V N ++ R + K AI+
Sbjct: 82 VKNPASQYYERHGVITKGAII 102
>UniRef50_A0RXG5 Cluster: Ribosomal protein S8E; n=2;
Thermoprotei|Rep: Ribosomal protein S8E - Cenarchaeum
symbiosum
Length = 129
Score = 35.9 bits (79), Expect = 0.70
Identities = 21/79 (26%), Positives = 38/79 (48%)
Frame = +1
Query: 1 KRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVY 180
+RKYE+ R G Q + + RG TK +D N + +K++I+ V+
Sbjct: 24 RRKYEIDRYPNEALSGAQETVTRKVRGKRTKTALKTIDFVNLA-VQGAKVKKSKIVKVLE 82
Query: 181 NASNNELVRTKTLVKNAIV 237
N +NN+ R + + A++
Sbjct: 83 NPTNNDYRRRGVITRGAVL 101
>UniRef50_A1FCF6 Cluster: Monooxygenase, FAD-binding; n=4;
Pseudomonas|Rep: Monooxygenase, FAD-binding -
Pseudomonas putida W619
Length = 430
Score = 34.3 bits (75), Expect = 2.1
Identities = 22/92 (23%), Positives = 44/92 (47%)
Frame = +3
Query: 297 RKKGAKLTEAEEAIINKKRSQKTARKYLARQRLAKVEGALEEQFHTGRLLACVASRPGQC 476
R G L +E +++++ + R+ L R + +EG + + H G + CV GQ
Sbjct: 73 RWNGQHLQLNQEFLLDRQCFDRALRRDLERAGVTVIEGRIRDVMHKG--VHCVGLDDGQV 130
Query: 477 GRADGYILEGKNSSSI*ERSSLRGRSNICILN 572
+A+ +++E + + LRG + +LN
Sbjct: 131 LQAE-FLVEARGRQAPLAADRLRGPETVSLLN 161
>UniRef50_A5ASW3 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 738
Score = 33.9 bits (74), Expect = 2.8
Identities = 21/57 (36%), Positives = 31/57 (54%)
Frame = +3
Query: 297 RKKGAKLTEAEEAIINKKRSQKTARKYLARQRLAKVEGALEEQFHTGRLLACVASRP 467
+K+G K E I + RK RQ+ K++ +EEQF +GRLLA ++S P
Sbjct: 273 KKEGEKGDGPVEEI---NKGNHVVRKLEKRQQDHKLDPHIEEQFGSGRLLAAISSYP 326
>UniRef50_UPI0000F2B19F Cluster: PREDICTED: hypothetical protein;
n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
protein - Monodelphis domestica
Length = 161
Score = 33.1 bits (72), Expect = 4.9
Identities = 16/37 (43%), Positives = 22/37 (59%)
Frame = +3
Query: 318 TEAEEAIINKKRSQKTARKYLARQRLAKVEGALEEQF 428
T EE I+NKK S+K +KY ++ AK+ L E F
Sbjct: 105 TPEEEEILNKKHSKKIQKKYEEWKKKAKISLLLREHF 141
>UniRef50_Q8TN82 Cluster: Predicted protein; n=1; Methanosarcina
acetivorans|Rep: Predicted protein - Methanosarcina
acetivorans
Length = 90
Score = 33.1 bits (72), Expect = 4.9
Identities = 21/53 (39%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = +3
Query: 267 YESHYTLPLGRKKGAKLTEAEEAIINKKRSQKTA-RKYLARQRLAKVEGALEE 422
Y + +TL R + A EA E ++ K +K A K LA+ L K+EG LEE
Sbjct: 31 YRNIWTLNGSRNRSATSKEACEKLLAKNCLRKIACEKLLAKNCLRKIEGLLEE 83
>UniRef50_P19214 Cluster: Erythrocyte-binding antigen 175; n=89;
Plasmodium (Laverania)|Rep: Erythrocyte-binding antigen
175 - Plasmodium falciparum (isolate Camp / Malaysia)
Length = 1435
Score = 33.1 bits (72), Expect = 4.9
Identities = 9/17 (52%), Positives = 15/17 (88%)
Frame = +3
Query: 216 PCQECNCCSRCNSFRQW 266
PC++ NC S+CNS+++W
Sbjct: 656 PCEDDNCKSKCNSYKEW 672
>UniRef50_Q0VMR6 Cluster: Putative uncharacterized protein; n=1;
Alcanivorax borkumensis SK2|Rep: Putative
uncharacterized protein - Alcanivorax borkumensis
(strain SK2 / ATCC 700651 / DSM 11573)
Length = 509
Score = 32.3 bits (70), Expect = 8.6
Identities = 18/57 (31%), Positives = 27/57 (47%)
Frame = +3
Query: 399 KVEGALEEQFHTGRLLACVASRPGQCGRADGYILEGKNSSSI*ERSSLRGRSNICIL 569
KV GA+EEQF ++ V RP G+ + + S I + L G SN+ +
Sbjct: 213 KVVGAVEEQFQGEQVTGVVIGRPVNFGKKQSDVENDRAISIITHAAELAGMSNVSFM 269
>UniRef50_A5BWY7 Cluster: Putative uncharacterized protein; n=1; Vitis
vinifera|Rep: Putative uncharacterized protein - Vitis
vinifera (Grape)
Length = 1752
Score = 32.3 bits (70), Expect = 8.6
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +3
Query: 198 IGAYKDPCQECNCCSRCNSFRQWYESHYTLPLGRK 302
+ A +P Q+ N CS C SF E + T+P R+
Sbjct: 1459 VQAISEPQQQANPCSICQSFEHMVEEYPTIPAARE 1493
>UniRef50_Q962J8 Cluster: PV1H14180_P; n=2; Plasmodium vivax|Rep:
PV1H14180_P - Plasmodium vivax
Length = 1011
Score = 32.3 bits (70), Expect = 8.6
Identities = 12/36 (33%), Positives = 25/36 (69%)
Frame = +3
Query: 303 KGAKLTEAEEAIINKKRSQKTARKYLARQRLAKVEG 410
+G KL EAE+ ++ +++S+ A K L ++ + ++EG
Sbjct: 586 EGGKLMEAEKKLLEEEKSRVDAEKKLMQEEMTRIEG 621
>UniRef50_Q16EJ7 Cluster: Putative uncharacterized protein; n=2;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 610
Score = 32.3 bits (70), Expect = 8.6
Identities = 14/48 (29%), Positives = 23/48 (47%)
Frame = +3
Query: 219 CQECNCCSRCNSFRQWYESHYTLPLGRKKGAKLTEAEEAIINKKRSQK 362
C + CC R F +Y H L G+K A++ A +I R+++
Sbjct: 419 CGDYVCCKRDFKFHTFYNKHMFLVHGQKTNARVKPASNQLIANMRAER 466
>UniRef50_A7F1W3 Cluster: Putative uncharacterized protein; n=1;
Sclerotinia sclerotiorum 1980|Rep: Putative
uncharacterized protein - Sclerotinia sclerotiorum 1980
Length = 622
Score = 32.3 bits (70), Expect = 8.6
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = -1
Query: 200 NSLLDALYTTSMIRVLRVEHSDPQEKLPVS 111
N L D +Y T I +R EH DP++ LP S
Sbjct: 309 NLLFDTIYATPPIARVRSEHEDPRDNLPDS 338
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 557,949,241
Number of Sequences: 1657284
Number of extensions: 10523204
Number of successful extensions: 32180
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 31071
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32166
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 40658285374
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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