Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40062
(828 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_46477| Best HMM Match : No HMM Matches (HMM E-Value=.) 174 8e-44
SB_6284| Best HMM Match : No HMM Matches (HMM E-Value=.) 122 3e-28
SB_22528| Best HMM Match : No HMM Matches (HMM E-Value=.) 112 3e-25
SB_56256| Best HMM Match : Ras (HMM E-Value=8.9e-31) 105 6e-23
SB_22530| Best HMM Match : No HMM Matches (HMM E-Value=.) 99 2e-21
SB_11757| Best HMM Match : Ras (HMM E-Value=0) 89 3e-18
SB_53179| Best HMM Match : BTB (HMM E-Value=3.3e-21) 82 5e-16
SB_51669| Best HMM Match : No HMM Matches (HMM E-Value=.) 81 8e-16
SB_32162| Best HMM Match : Ras (HMM E-Value=4.7e-31) 79 3e-15
SB_21165| Best HMM Match : LRR_1 (HMM E-Value=6.5e-13) 74 2e-13
SB_35222| Best HMM Match : No HMM Matches (HMM E-Value=.) 65 6e-11
SB_44625| Best HMM Match : Ras (HMM E-Value=0) 61 9e-10
SB_17524| Best HMM Match : Ras (HMM E-Value=2.1e-10) 59 4e-09
SB_51788| Best HMM Match : No HMM Matches (HMM E-Value=.) 59 5e-09
SB_22342| Best HMM Match : No HMM Matches (HMM E-Value=.) 58 9e-09
SB_54971| Best HMM Match : Ras (HMM E-Value=0) 57 2e-08
SB_24842| Best HMM Match : No HMM Matches (HMM E-Value=.) 57 2e-08
SB_7589| Best HMM Match : Ras (HMM E-Value=0) 56 3e-08
SB_4971| Best HMM Match : Ras (HMM E-Value=0) 56 3e-08
SB_58217| Best HMM Match : Ras (HMM E-Value=0.00048) 56 4e-08
SB_48712| Best HMM Match : No HMM Matches (HMM E-Value=.) 56 4e-08
SB_58218| Best HMM Match : Ras (HMM E-Value=1.4013e-44) 56 5e-08
SB_10811| Best HMM Match : Ras (HMM E-Value=0) 55 6e-08
SB_17958| Best HMM Match : No HMM Matches (HMM E-Value=.) 55 8e-08
SB_36483| Best HMM Match : Ras (HMM E-Value=0) 54 1e-07
SB_32061| Best HMM Match : No HMM Matches (HMM E-Value=.) 53 3e-07
SB_52232| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 4e-07
SB_13045| Best HMM Match : Ras (HMM E-Value=0) 52 6e-07
SB_33743| Best HMM Match : Ras (HMM E-Value=2e-34) 52 6e-07
SB_22529| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 6e-07
SB_50855| Best HMM Match : Ras (HMM E-Value=0) 52 8e-07
SB_50523| Best HMM Match : Ras (HMM E-Value=0) 49 4e-06
SB_28695| Best HMM Match : Ras (HMM E-Value=0) 47 2e-05
SB_39864| Best HMM Match : Ras (HMM E-Value=1.6e-30) 46 5e-05
SB_24843| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 7e-05
SB_39585| Best HMM Match : Ras (HMM E-Value=6e-35) 45 9e-05
SB_42285| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 2e-04
SB_11841| Best HMM Match : Ras (HMM E-Value=0) 43 3e-04
SB_52002| Best HMM Match : Ras (HMM E-Value=2.3e-19) 42 5e-04
SB_2885| Best HMM Match : Ras (HMM E-Value=0.0059) 42 6e-04
SB_41076| Best HMM Match : Ras (HMM E-Value=1.90016e-42) 42 8e-04
SB_3743| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 8e-04
SB_34767| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 0.001
SB_27557| Best HMM Match : Ras (HMM E-Value=0) 41 0.001
SB_17192| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_6223| Best HMM Match : Ras (HMM E-Value=0) 39 0.006
SB_2281| Best HMM Match : Ras (HMM E-Value=3.4e-06) 39 0.006
SB_45519| Best HMM Match : RNB (HMM E-Value=1.6e-35) 39 0.006
SB_288| Best HMM Match : Ras (HMM E-Value=1.5e-11) 39 0.006
SB_8315| Best HMM Match : Ras (HMM E-Value=0) 38 0.008
SB_53183| Best HMM Match : Ras (HMM E-Value=0) 38 0.010
SB_47462| Best HMM Match : Ras (HMM E-Value=0) 38 0.010
SB_8803| Best HMM Match : Ras (HMM E-Value=7.9e-30) 38 0.013
SB_57342| Best HMM Match : Arf (HMM E-Value=0) 37 0.023
SB_37042| Best HMM Match : Arf (HMM E-Value=0) 36 0.040
SB_1071| Best HMM Match : Ras (HMM E-Value=0) 35 0.070
SB_24444| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.093
SB_49252| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.093
SB_33691| Best HMM Match : Ras (HMM E-Value=2.8e-13) 34 0.12
SB_25972| Best HMM Match : MIF4G (HMM E-Value=4.9e-40) 34 0.16
SB_12762| Best HMM Match : Ras (HMM E-Value=2.2e-21) 34 0.16
SB_43575| Best HMM Match : Sina (HMM E-Value=0) 34 0.16
SB_22243| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.16
SB_33745| Best HMM Match : Ras (HMM E-Value=2.5e-21) 33 0.21
SB_55155| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.28
SB_48157| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.28
SB_35038| Best HMM Match : Ras (HMM E-Value=6.8e-13) 33 0.28
SB_38511| Best HMM Match : Ras (HMM E-Value=1.2e-22) 32 0.49
SB_5222| Best HMM Match : Ras (HMM E-Value=2.9e-09) 32 0.49
SB_45967| Best HMM Match : Ras (HMM E-Value=2.1e-07) 32 0.65
SB_2235| Best HMM Match : Arf (HMM E-Value=3.1e-13) 32 0.65
SB_38579| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.86
SB_11310| Best HMM Match : Arf (HMM E-Value=0) 31 1.1
SB_40082| Best HMM Match : tRNA-synt_2 (HMM E-Value=8.1e-37) 31 1.1
SB_24106| Best HMM Match : Ras (HMM E-Value=1e-35) 30 2.0
SB_9680| Best HMM Match : Ank (HMM E-Value=4e-20) 30 2.0
SB_22497| Best HMM Match : Ras (HMM E-Value=7.7e-07) 30 2.0
SB_7861| Best HMM Match : MMR_HSR1 (HMM E-Value=0.96) 30 2.6
SB_39092| Best HMM Match : Arf (HMM E-Value=8e-36) 29 3.5
SB_12958| Best HMM Match : Ras (HMM E-Value=6e-13) 29 3.5
SB_45651| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.6
SB_53792| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.6
SB_8511| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.6
SB_642| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.6
SB_33999| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.0
SB_27990| Best HMM Match : DUF229 (HMM E-Value=6.5e-07) 28 8.0
SB_56127| Best HMM Match : p450 (HMM E-Value=2.3e-07) 28 8.0
SB_42246| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.0
>SB_46477| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6116
Score = 174 bits (423), Expect = 8e-44
Identities = 79/86 (91%), Positives = 80/86 (93%)
Frame = +1
Query: 256 VDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFC 435
VDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFS+DSPDSLENIPEKWTPEVKHFC
Sbjct: 5972 VDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFC 6031
Query: 436 PNVPIILVGNKKDLRNDPATINELPK 513
PNVPIILVGNKKDLR D T EL K
Sbjct: 6032 PNVPIILVGNKKDLRMDENTKRELQK 6057
Score = 101 bits (242), Expect = 7e-22
Identities = 47/47 (100%), Positives = 47/47 (100%)
Frame = +2
Query: 116 MAAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIE 256
MAAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIE
Sbjct: 5925 MAAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIE 5971
Score = 88.2 bits (209), Expect = 7e-18
Identities = 41/50 (82%), Positives = 47/50 (94%)
Frame = +2
Query: 539 EGRAMAEKINAFAYLECSAKSKEGVREVFETATRAALQVKKKKKTRCSLL 688
EGRAMA+KI+A+AYLECSAK+K+GVREVFETATRAALQ KKKKK +C LL
Sbjct: 6067 EGRAMADKISAYAYLECSAKTKDGVREVFETATRAALQTKKKKKGKCVLL 6116
>SB_6284| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 191
Score = 122 bits (295), Expect = 3e-28
Identities = 53/86 (61%), Positives = 63/86 (73%)
Frame = +1
Query: 256 VDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFC 435
+ G+ L L+DTAGQEDYDRLRPLSYP TDV L+CFSV SP S EN+ EKW PE+ H C
Sbjct: 46 IGGEPYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHC 105
Query: 436 PNVPIILVGNKKDLRNDPATINELPK 513
P P +LVG + DLR+D TI +L K
Sbjct: 106 PKTPFLLVGTQVDLRDDQGTIEKLSK 131
Score = 59.3 bits (137), Expect = 4e-09
Identities = 24/40 (60%), Positives = 31/40 (77%)
Frame = +2
Query: 134 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADI 253
K V+VGDGA GKTCLLI ++ ++FP YVPTVF+NY +
Sbjct: 5 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTV 44
Score = 42.3 bits (95), Expect = 5e-04
Identities = 23/56 (41%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Frame = +2
Query: 524 ACETAEGRAMAEKINAFAYLECSAKSKEGVREVFETATRAALQ-VKKKKKTRCSLL 688
A E AE +A ++ A Y+ECSA +++G++ VF+ A AAL+ + +KK +C LL
Sbjct: 138 AVEAAE--KLARELRAVKYVECSALTQKGLKNVFDEAILAALEPPEPQKKKKCRLL 191
>SB_22528| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 467
Score = 112 bits (270), Expect = 3e-25
Identities = 49/76 (64%), Positives = 56/76 (73%)
Frame = +1
Query: 256 VDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFC 435
+DGK + LWDTAGQEDYDRLRPLSYP TDV L+CF + S S ENI KW PE+ H
Sbjct: 48 LDGKAYNVGLWDTAGQEDYDRLRPLSYPMTDVFLVCFDIGSRTSFENIESKWLPELNHHM 107
Query: 436 PNVPIILVGNKKDLRN 483
P P ILVGNK+DLR+
Sbjct: 108 PETPKILVGNKRDLRS 123
Score = 50.4 bits (115), Expect = 2e-06
Identities = 21/40 (52%), Positives = 29/40 (72%)
Frame = +2
Query: 134 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADI 253
KLV+VGDG GK+ LI + + FP Y+PTVF+NY ++I
Sbjct: 7 KLVVVGDGGVGKSAFLITATTNAFPGEYIPTVFDNYSSNI 46
Score = 29.1 bits (62), Expect = 4.6
Identities = 13/34 (38%), Positives = 24/34 (70%)
Frame = +2
Query: 539 EGRAMAEKINAFAYLECSAKSKEGVREVFETATR 640
EG+A+A+++ YLE S+ +++GV++V A R
Sbjct: 143 EGKALAKRLG-MQYLENSSLTQDGVKDVMSAAIR 175
>SB_56256| Best HMM Match : Ras (HMM E-Value=8.9e-31)
Length = 506
Score = 105 bits (251), Expect = 6e-23
Identities = 42/84 (50%), Positives = 63/84 (75%)
Frame = +1
Query: 256 VDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFC 435
VDG+++EL LWDT+G EDYD +RPLSY + D++L+CF + P + ++I EKW EV C
Sbjct: 275 VDGERIELTLWDTSGHEDYDHVRPLSYNNVDIVLICFDISRPKTADSILEKWIIEVCDLC 334
Query: 436 PNVPIILVGNKKDLRNDPATINEL 507
PN P++LVG K+DLR++ +++L
Sbjct: 335 PNKPVLLVGCKQDLRSEVNIVSKL 358
Score = 44.0 bits (99), Expect = 2e-04
Identities = 20/48 (41%), Positives = 28/48 (58%)
Frame = +2
Query: 113 PMAAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIE 256
P IR +++VGD CGKT LL + ++QF E Y TVF + +E
Sbjct: 227 PNGQIRIPVILVGDSECGKTALLNAYVRNQFNEKYEATVFNSLSTAVE 274
Score = 35.1 bits (77), Expect = 0.070
Identities = 18/47 (38%), Positives = 32/47 (68%), Gaps = 2/47 (4%)
Frame = +2
Query: 542 GRAMAEKINAFAYLECSAKSKE-GVREVFETATRAAL-QVKKKKKTR 676
GR +A++I A Y+ECS+K+ + + +VFE T AA+ ++ +K+R
Sbjct: 439 GRKLADRICALDYIECSSKTMDFQLEKVFEMTTLAAINKLNNHRKSR 485
>SB_22530| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 191
Score = 99 bits (238), Expect = 2e-21
Identities = 42/75 (56%), Positives = 55/75 (73%)
Frame = +1
Query: 256 VDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFC 435
VDG + + L+D+AG ED+DRLRPL YP+TD+ L+CF + S EN+ +W PE+ HF
Sbjct: 50 VDGIKYQAVLFDSAGGEDFDRLRPLGYPNTDIFLVCFDIAHRASFENVALRWLPELDHFS 109
Query: 436 PNVPIILVGNKKDLR 480
P VP +LVGNKKDLR
Sbjct: 110 PGVPRVLVGNKKDLR 124
Score = 42.7 bits (96), Expect = 3e-04
Identities = 18/34 (52%), Positives = 23/34 (67%)
Frame = +2
Query: 134 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFE 235
KL IVGDGA GKT L I + + FP Y+PT ++
Sbjct: 8 KLYIVGDGAVGKTALFITAATNTFPTEYIPTAYD 41
>SB_11757| Best HMM Match : Ras (HMM E-Value=0)
Length = 211
Score = 89.4 bits (212), Expect = 3e-18
Identities = 41/84 (48%), Positives = 52/84 (61%)
Frame = +1
Query: 256 VDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFC 435
V+ K + DTAGQED+D LRPL Y DV ++CFSV SP S N+ KW PE++ F
Sbjct: 61 VNKKLCMIEFCDTAGQEDFDALRPLCYSSADVFIVCFSVVSPTSFANVASKWIPEIREFQ 120
Query: 436 PNVPIILVGNKKDLRNDPATINEL 507
P PIILVG DL++ + EL
Sbjct: 121 PKAPIILVGTHSDLKDCYKILTEL 144
Score = 50.4 bits (115), Expect = 2e-06
Identities = 22/41 (53%), Positives = 26/41 (63%)
Frame = +2
Query: 134 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIE 256
K VIVGDG GKT LL+ + D FP YVPT F+ Y +E
Sbjct: 20 KCVIVGDGGVGKTSLLVSYMMDGFPNSYVPTAFDTYHVTVE 60
>SB_53179| Best HMM Match : BTB (HMM E-Value=3.3e-21)
Length = 604
Score = 82.2 bits (194), Expect = 5e-16
Identities = 36/86 (41%), Positives = 54/86 (62%), Gaps = 5/86 (5%)
Frame = +1
Query: 286 WDT---AGQEDYD--RLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPI 450
WDT A E+ D +LRPL Y DTDV ++CF + +P S +N+ W PE+KH+ P P+
Sbjct: 69 WDTCTLARTEELDLSKLRPLEYRDTDVFIICFDITNPTSFQNVSTVWVPELKHYMPETPV 128
Query: 451 ILVGNKKDLRNDPATINELPK*SKSL 528
++VGNKKD+R + + S++L
Sbjct: 129 LVVGNKKDMRTNTRALTAQAPVSRNL 154
Score = 30.7 bits (66), Expect = 1.5
Identities = 16/46 (34%), Positives = 27/46 (58%)
Frame = +2
Query: 536 AEGRAMAEKINAFAYLECSAKSKEGVREVFETATRAALQVKKKKKT 673
++G +A ++ Y E S + EG+REV TA R A+Q + + +T
Sbjct: 211 SKGEELAARLGT-VYRESSGYTGEGIREVVGTAVRLAVQHRLQTQT 255
>SB_51669| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 646
Score = 81.4 bits (192), Expect = 8e-16
Identities = 35/81 (43%), Positives = 51/81 (62%)
Frame = +1
Query: 241 RCRHRVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPE 420
R +DG V L LWDT G D+ R +Y + VI++CF++++P S +++ W PE
Sbjct: 73 RANFTIDGVSVSLRLWDTFG--DHSMNRRFAYQNAHVIVLCFAINTPSSFKDVNAVWYPE 130
Query: 421 VKHFCPNVPIILVGNKKDLRN 483
+K +CP VPIILVG K D R+
Sbjct: 131 IKKYCPRVPIILVGTKSDWRS 151
Score = 33.5 bits (73), Expect = 0.21
Identities = 21/61 (34%), Positives = 31/61 (50%), Gaps = 3/61 (4%)
Frame = +2
Query: 497 STSFQNEARACETAE---GRAMAEKINAFAYLECSAKSKEGVREVFETATRAALQVKKKK 667
+TS R C GR +A++I+A Y E S G +VFE A RAAL +++
Sbjct: 161 NTSLSKRMRECFLVSPDMGRQVAKEIDA-VYYEASVVDMWGYHDVFENAIRAALNSRRQT 219
Query: 668 K 670
+
Sbjct: 220 R 220
>SB_32162| Best HMM Match : Ras (HMM E-Value=4.7e-31)
Length = 357
Score = 79.4 bits (187), Expect = 3e-15
Identities = 33/75 (44%), Positives = 46/75 (61%)
Frame = +1
Query: 256 VDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFC 435
V ++ L LWDT G +YDRLRPL+Y +D+IL+CF + + + E I KW PE
Sbjct: 47 VGSQKFLLDLWDTEGTTEYDRLRPLTYQGSDIILLCFDISNRQTFERIESKWLPETTQVL 106
Query: 436 PNVPIILVGNKKDLR 480
P +L+GNK D+R
Sbjct: 107 PGSIRVLIGNKNDIR 121
Score = 31.9 bits (69), Expect = 0.65
Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = +2
Query: 116 MAAIRK-KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIE 256
MA+ RK K+V+ GD GKT LI ++++ PT F NY +E
Sbjct: 1 MASERKLKVVLTGDNNVGKTSFLINLTQNELEG--TPTAFANYELGLE 46
>SB_21165| Best HMM Match : LRR_1 (HMM E-Value=6.5e-13)
Length = 1383
Score = 73.7 bits (173), Expect = 2e-13
Identities = 30/69 (43%), Positives = 43/69 (62%)
Frame = +1
Query: 256 VDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFC 435
VD K + + + Q YD+LR YPDTDV L+CFSV SL+++ +W PE++ FC
Sbjct: 110 VDNKAYNIEIHECTSQTAYDQLRAELYPDTDVFLVCFSVTLQQSLKDVVNRWVPELRRFC 169
Query: 436 PNVPIILVG 462
P P +L+G
Sbjct: 170 PVTPFLLIG 178
>SB_35222| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 267
Score = 65.3 bits (152), Expect = 6e-11
Identities = 34/77 (44%), Positives = 44/77 (57%)
Frame = +1
Query: 256 VDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFC 435
VDGK +L L D ++ D + DTDV +CFSV DS ++ KW EVK+
Sbjct: 63 VDGKVYKLELCDV---DNLDTKISKPFSDTDVFCLCFSVGDMDSFRHVENKWYAEVKNCS 119
Query: 436 PNVPIILVGNKKDLRND 486
PN PII+VG K DLR +
Sbjct: 120 PNSPIIVVGTKTDLREN 136
Score = 34.3 bits (75), Expect = 0.12
Identities = 15/42 (35%), Positives = 26/42 (61%), Gaps = 2/42 (4%)
Frame = +2
Query: 134 KLVIVGDGACGKTCLL--IVFSKDQFPEVYVPTVFENYVADI 253
++VI+GD GKTCLL + + + ++ ++ NYVA+I
Sbjct: 20 RIVILGDSTVGKTCLLLQLCYKSNTMSRKHLESISNNYVANI 61
>SB_44625| Best HMM Match : Ras (HMM E-Value=0)
Length = 128
Score = 61.3 bits (142), Expect = 9e-10
Identities = 28/73 (38%), Positives = 45/73 (61%)
Frame = +1
Query: 256 VDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFC 435
+DG++V+L +WDTAGQE + + Y T +++ + V S D+ N+ ++W E+ C
Sbjct: 21 IDGEKVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSADTFVNV-KRWLHEIDQNC 79
Query: 436 PNVPIILVGNKKD 474
+V ILVGNK D
Sbjct: 80 DDVIRILVGNKDD 92
>SB_17524| Best HMM Match : Ras (HMM E-Value=2.1e-10)
Length = 159
Score = 59.3 bits (137), Expect = 4e-09
Identities = 29/73 (39%), Positives = 44/73 (60%)
Frame = +1
Query: 265 KQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNV 444
K++++ LWDT G E+Y+ L Y ++ V+L+ +S+D PDSL + E T + P
Sbjct: 56 KKLKIHLWDTLGMEEYESLTRNHYSNSKVVLVVYSLDLPDSLAQVKE-CTQSAQVNAPAA 114
Query: 445 PIILVGNKKDLRN 483
I+LV NK DL N
Sbjct: 115 KIVLVANKMDLPN 127
>SB_51788| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 414
Score = 58.8 bits (136), Expect = 5e-09
Identities = 25/60 (41%), Positives = 37/60 (61%)
Frame = +1
Query: 289 DTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILVGNK 468
DT G D +RPL+Y D+ ++CF V + S EN+ KW PE++ + VP++LVG K
Sbjct: 79 DTGGSTVLDYVRPLAYIHADLFILCFDVTNRASFENVASKWFPEIRLYEKKVPLMLVGLK 138
>SB_22342| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 778
Score = 58.0 bits (134), Expect = 9e-09
Identities = 28/75 (37%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
Frame = +1
Query: 256 VDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEV-KHF 432
+DGK ++L +WDTAGQE + + Y I++ + V +S N+ ++W E+ ++
Sbjct: 73 LDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNV-KQWLQEIDRYA 131
Query: 433 CPNVPIILVGNKKDL 477
C NV +LVGNK DL
Sbjct: 132 CENVNKLLVGNKCDL 146
Score = 28.7 bits (61), Expect = 6.1
Identities = 10/20 (50%), Positives = 16/20 (80%)
Frame = +2
Query: 134 KLVIVGDGACGKTCLLIVFS 193
KL+++GD GK+CLL+ F+
Sbjct: 10 KLLLIGDSGVGKSCLLLRFA 29
>SB_54971| Best HMM Match : Ras (HMM E-Value=0)
Length = 239
Score = 57.2 bits (132), Expect = 2e-08
Identities = 25/71 (35%), Positives = 42/71 (59%)
Frame = +1
Query: 271 VELALWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPI 450
++ +WDTAGQE + LR Y ++ F V S + +N+P W +++ C N+PI
Sbjct: 81 IKFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRVTYKNVP-NWHRDLERVCENIPI 139
Query: 451 ILVGNKKDLRN 483
+L GNK D+++
Sbjct: 140 VLCGNKVDIKD 150
>SB_24842| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 156
Score = 56.8 bits (131), Expect = 2e-08
Identities = 26/75 (34%), Positives = 46/75 (61%), Gaps = 1/75 (1%)
Frame = +1
Query: 256 VDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHF- 432
VDG++V+L +WDTAGQE + + Y + D +++ + + + S E++P+ W + +
Sbjct: 51 VDGEKVKLQIWDTAGQERFRSITQSYYHNADGVIVTYDITNKKSFESLPQ-WLDDTNRYT 109
Query: 433 CPNVPIILVGNKKDL 477
+V I +VGNK DL
Sbjct: 110 SKDVLIAIVGNKSDL 124
Score = 36.3 bits (80), Expect = 0.030
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = +2
Query: 134 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTV 229
K+++VGD GKTCL+ F+K FP PT+
Sbjct: 9 KIILVGDANVGKTCLVRQFTKGYFPPNQGPTI 40
>SB_7589| Best HMM Match : Ras (HMM E-Value=0)
Length = 640
Score = 56.4 bits (130), Expect = 3e-08
Identities = 30/84 (35%), Positives = 44/84 (52%), Gaps = 1/84 (1%)
Frame = +1
Query: 256 VDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFC 435
VDGK L LWDTAGQE + + + D +L+ + V S ++ + W ++ C
Sbjct: 486 VDGKTYALQLWDTAGQERFRSIAKSYFRKADGVLLLYDVTCETSFLDVRD-WVEAIEESC 544
Query: 436 PN-VPIILVGNKKDLRNDPATINE 504
VPI+L GNK D+R A N+
Sbjct: 545 SKPVPIMLCGNKIDIRQSAAAENK 568
>SB_4971| Best HMM Match : Ras (HMM E-Value=0)
Length = 209
Score = 56.4 bits (130), Expect = 3e-08
Identities = 29/75 (38%), Positives = 43/75 (57%), Gaps = 1/75 (1%)
Frame = +1
Query: 256 VDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHF- 432
VDGK ++L +WDTAGQE + L Y I++ + V+ ++ ++ +W EV +
Sbjct: 52 VDGKTIKLQIWDTAGQERFRTLTTAYYRSAHGIVLIYDVNESETFLHL-SQWLEEVSEYA 110
Query: 433 CPNVPIILVGNKKDL 477
C V ILVGNK DL
Sbjct: 111 CEGVNTILVGNKCDL 125
Score = 35.1 bits (77), Expect = 0.070
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = +2
Query: 134 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTV 229
KL+++GD GK+ LL+ F+ D F Y+ T+
Sbjct: 10 KLLLIGDSGVGKSSLLLRFADDTFSNTYISTI 41
>SB_58217| Best HMM Match : Ras (HMM E-Value=0.00048)
Length = 472
Score = 56.0 bits (129), Expect = 4e-08
Identities = 28/67 (41%), Positives = 39/67 (58%)
Frame = +1
Query: 283 LWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILVG 462
LWDT G E+Y+ L Y ++ V+L+ +S+D PDSL + E T + P I+LV
Sbjct: 3 LWDTLGMEEYESLTRNHYSNSKVVLVVYSLDLPDSLAQVKE-CTQSAQVNAPAAKIVLVA 61
Query: 463 NKKDLRN 483
NK DL N
Sbjct: 62 NKMDLPN 68
>SB_48712| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 410
Score = 56.0 bits (129), Expect = 4e-08
Identities = 29/80 (36%), Positives = 44/80 (55%), Gaps = 5/80 (6%)
Frame = +1
Query: 253 RVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHF 432
++DG+ L +WDTAGQE + LR Y +D+ L+ ++VD S N+ W E ++
Sbjct: 254 KLDGESYTLQIWDTAGQERFKSLRTPFYRGSDLCLLVYAVDDAKSFTNL-SMWKKEFLYY 312
Query: 433 C-----PNVPIILVGNKKDL 477
N P IL+GNK D+
Sbjct: 313 ADVRDQDNFPFILLGNKVDV 332
>SB_58218| Best HMM Match : Ras (HMM E-Value=1.4013e-44)
Length = 212
Score = 55.6 bits (128), Expect = 5e-08
Identities = 28/81 (34%), Positives = 42/81 (51%)
Frame = +1
Query: 253 RVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHF 432
++ KQV L++WDTAG E + + Y ++ F+VD P SL+ + W + F
Sbjct: 54 KIGEKQVTLSVWDTAGVERFRTVTKNYYRGAHACILMFNVDDPGSLQYLLH-WIHDTDEF 112
Query: 433 CPNVPIILVGNKKDLRNDPAT 495
CP+ +LV NK DL T
Sbjct: 113 CPDALKVLVANKIDLDEQVTT 133
>SB_10811| Best HMM Match : Ras (HMM E-Value=0)
Length = 304
Score = 55.2 bits (127), Expect = 6e-08
Identities = 29/78 (37%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Frame = +1
Query: 256 VDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFC 435
V GK V+L +WDTAGQE + + Y L+ + + S ++ ++ W + +
Sbjct: 139 VGGKSVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDISSRETFNSL-TNWLTDARTLA 197
Query: 436 -PNVPIILVGNKKDLRND 486
PN+ IILVGNKKDL D
Sbjct: 198 SPNIVIILVGNKKDLDAD 215
>SB_17958| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 271
Score = 54.8 bits (126), Expect = 8e-08
Identities = 27/83 (32%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Frame = +1
Query: 256 VDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEV-KHF 432
+ G +V+L WDTAGQE + + Y + D +++ F + + + +IP+ W V K+
Sbjct: 55 IHGDRVKLQCWDTAGQEKFRGITQSYYRNADAVILVFDITNRGTFASIPQ-WLMNVQKYT 113
Query: 433 CPNVPIILVGNKKDLRNDPATIN 501
N+ +LVGNK DL+ +N
Sbjct: 114 NKNILKVLVGNKTDLKGASRKVN 136
>SB_36483| Best HMM Match : Ras (HMM E-Value=0)
Length = 213
Score = 54.0 bits (124), Expect = 1e-07
Identities = 30/77 (38%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Frame = +1
Query: 256 VDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFC 435
+DGK+V+L LWDTAG+E Y L + D L+ F V +S ++I + W E
Sbjct: 54 LDGKKVKLQLWDTAGEEKYRALSRSFFRGADGALLVFDVSVKESFDSIRDYWLHEFHKVS 113
Query: 436 PNVPI-ILVGNKKDLRN 483
+ I ILVGNK D ++
Sbjct: 114 GSDTITILVGNKCDKKD 130
>SB_32061| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 919
Score = 52.8 bits (121), Expect = 3e-07
Identities = 26/75 (34%), Positives = 44/75 (58%), Gaps = 2/75 (2%)
Frame = +1
Query: 256 VDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFC 435
V+G + +LA+WDTAGQE + L P Y +++ + +S ++ + + E+W EV+ +
Sbjct: 52 VEGNKAKLAIWDTAGQERFRTLTPSYYRGAQGVILVYDTNSRETFDKL-EEWLNEVEMYS 110
Query: 436 PNVPII--LVGNKKD 474
I+ LVGNK D
Sbjct: 111 TKKDIVKMLVGNKID 125
>SB_52232| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 929
Score = 52.4 bits (120), Expect = 4e-07
Identities = 21/33 (63%), Positives = 25/33 (75%)
Frame = +1
Query: 409 WTPEVKHFCPNVPIILVGNKKDLRNDPATINEL 507
W PEV H CPN PI+LVG K DLR+D TI++L
Sbjct: 576 WYPEVSHHCPNTPIVLVGTKLDLRDDKETIDKL 608
Score = 32.3 bits (70), Expect = 0.49
Identities = 14/34 (41%), Positives = 24/34 (70%)
Frame = +2
Query: 539 EGRAMAEKINAFAYLECSAKSKEGVREVFETATR 640
+G MA++I A YLECSA +++G++ + AT+
Sbjct: 620 QGLQMAKEIGAVKYLECSALTQKGLKTQNQYATK 653
>SB_13045| Best HMM Match : Ras (HMM E-Value=0)
Length = 629
Score = 52.0 bits (119), Expect = 6e-07
Identities = 25/78 (32%), Positives = 46/78 (58%), Gaps = 1/78 (1%)
Frame = +1
Query: 253 RVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVK-H 429
+V+GK ++ +WDTAGQE Y + Y ++ + + + +++ E+W EV+ H
Sbjct: 55 QVEGKIIKAQVWDTAGQERYRAITSAYYRGAVGAVLVYDLTKQKTFQDV-ERWLLEVREH 113
Query: 430 FCPNVPIILVGNKKDLRN 483
P + ++LVGNK DL++
Sbjct: 114 ADPTIVVMLVGNKCDLKH 131
>SB_33743| Best HMM Match : Ras (HMM E-Value=2e-34)
Length = 241
Score = 52.0 bits (119), Expect = 6e-07
Identities = 24/75 (32%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Frame = +1
Query: 265 KQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCP-N 441
+ V+L +WDTAGQE + + Y + +++ + + D+ +N+ +W +V+ + P N
Sbjct: 93 QDVKLQIWDTAGQERFRTITQSYYRSCNGVIIAYDITKCDTFKNV-IRWGEDVQKYAPEN 151
Query: 442 VPIILVGNKKDLRND 486
+LVGNKKDL +
Sbjct: 152 AIKLLVGNKKDLERE 166
>SB_22529| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 206
Score = 52.0 bits (119), Expect = 6e-07
Identities = 28/76 (36%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Frame = +1
Query: 256 VDGKQVELALWDTAGQEDYDRLRPLS-YPDTDVILMCFSVDSPDSLENIPEKWTPEVKHF 432
+DGK+ + L DT G + R+ P + V L+CF + + +S NI W P V
Sbjct: 52 IDGKRYTVLLCDTPGTM-HPRIPPQHWFQYASVFLLCFDIANRESFANIESTWLPHVNLE 110
Query: 433 CPNVPIILVGNKKDLR 480
+VP +LVGNK +LR
Sbjct: 111 TSDVPKVLVGNKMELR 126
Score = 33.1 bits (72), Expect = 0.28
Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = +2
Query: 134 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEWMENKWN-WLCGIP 295
K+V VGD GKT L + FP ++ ++F+ Y +E ++ LC P
Sbjct: 11 KVVFVGDKNVGKTSFLYAATTHNFPTGFIASIFDGYSKTMEIDGKRYTVLLCDTP 65
>SB_50855| Best HMM Match : Ras (HMM E-Value=0)
Length = 733
Score = 51.6 bits (118), Expect = 8e-07
Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Frame = +1
Query: 256 VDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEV-KHF 432
+D V+ +WDTAGQE Y L P+ Y ++ + + + D+ + W E+ +
Sbjct: 65 LDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQDTFAR-AKTWVKELQRQA 123
Query: 433 CPNVPIILVGNKKDL 477
PN+ I L GNK DL
Sbjct: 124 SPNIVIALSGNKADL 138
Score = 31.1 bits (67), Expect = 1.1
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = +2
Query: 134 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTV 229
KLV++G+ A GK+ L++ F K QF E T+
Sbjct: 23 KLVLLGESAVGKSSLVLRFVKGQFHEYQESTI 54
>SB_50523| Best HMM Match : Ras (HMM E-Value=0)
Length = 154
Score = 49.2 bits (112), Expect = 4e-06
Identities = 26/73 (35%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Frame = +1
Query: 262 GKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEV-KHFCP 438
GK+++L +WDTAGQE + + Y I++ + V + S NI KW ++ H
Sbjct: 2 GKKIKLQIWDTAGQERFHTITTAYYRGAMGIMLVYDVTNEKSFSNI-SKWLKKIDDHANE 60
Query: 439 NVPIILVGNKKDL 477
+V +LVGNK D+
Sbjct: 61 DVKRMLVGNKCDM 73
>SB_28695| Best HMM Match : Ras (HMM E-Value=0)
Length = 1058
Score = 46.8 bits (106), Expect = 2e-05
Identities = 26/78 (33%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
Frame = +1
Query: 256 VDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFC 435
V+G+ + + LWDTAGQE + + + D IL+ + V + S N+ +KW V+
Sbjct: 940 VNGQCIAIQLWDTAGQERFRSITKQYFRKADGILIFYDVTAESSFTNL-KKWMVSVEEGA 998
Query: 436 -PNVPIILVGNKKDLRND 486
V +++GNK DL D
Sbjct: 999 EEGVAKMVLGNKTDLAED 1016
>SB_39864| Best HMM Match : Ras (HMM E-Value=1.6e-30)
Length = 421
Score = 45.6 bits (103), Expect = 5e-05
Identities = 22/74 (29%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Frame = +1
Query: 256 VDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFC 435
V+ K + +WDTAGQE + L PL Y D ++ + + + ++ W E++ +
Sbjct: 4 VNDKAYKFNIWDTAGQERFKSLAPLYYRDAAAAILVYDITIESTFHSL-RPWIRELQRYG 62
Query: 436 P-NVPIILVGNKKD 474
P ++ I + GNK D
Sbjct: 63 PQDIVIAVAGNKCD 76
>SB_24843| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 265
Score = 45.2 bits (102), Expect = 7e-05
Identities = 26/77 (33%), Positives = 43/77 (55%), Gaps = 3/77 (3%)
Frame = +1
Query: 256 VDGKQVELALWDTAGQEDYDRLRPLS-YPDTDVILMCFSVDSPDSLENIPEKWTPEVKH- 429
++G+ V+L LWDTAGQE + + Y + + ++ + + S E + W E +H
Sbjct: 90 LNGEFVKLQLWDTAGQERFRKSMVCHYYRNVNAVVFMYDITRKCSFEAL-TTWIVEYRHH 148
Query: 430 -FCPNVPIILVGNKKDL 477
+ +VP IL+GNK DL
Sbjct: 149 AYSGDVPKILIGNKCDL 165
Score = 30.7 bits (66), Expect = 1.5
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +2
Query: 134 KLVIVGDGACGKTCLLIVFSKDQFPE 211
K++I+GD GKTCL +FPE
Sbjct: 48 KIIIIGDSNVGKTCLAYRLCTGKFPE 73
>SB_39585| Best HMM Match : Ras (HMM E-Value=6e-35)
Length = 145
Score = 44.8 bits (101), Expect = 9e-05
Identities = 25/72 (34%), Positives = 37/72 (51%), Gaps = 5/72 (6%)
Frame = +1
Query: 283 LWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPE-VKHFCP----NVP 447
+WDTAGQE + L Y D ++ F V P+S + + + W E + P N P
Sbjct: 1 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTQPNSFKTL-DSWRDEFLIQASPRDPENFP 59
Query: 448 IILVGNKKDLRN 483
+++GNK DL N
Sbjct: 60 FVVLGNKIDLEN 71
Score = 28.3 bits (60), Expect = 8.0
Identities = 15/45 (33%), Positives = 19/45 (42%)
Frame = +2
Query: 515 EARACETAEGRAMAEKINAFAYLECSAKSKEGVREVFETATRAAL 649
E RA +A N Y E SAK V + F+T + AL
Sbjct: 70 ENRAVSAKRAQAWCHSKNDIPYFETSAKEAINVEQAFQTIAKNAL 114
>SB_42285| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1153
Score = 43.6 bits (98), Expect = 2e-04
Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 2/75 (2%)
Frame = +1
Query: 256 VDGK--QVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKH 429
VD K + + LWD+ G++ L+PL D + +M F+V++P ++ +P W V+
Sbjct: 401 VDDKWDNLTVELWDSGGRQCLFGLQPLFLTDQTLYVMTFNVNNPMEIKLMP-NWFFLVQT 459
Query: 430 FCPNVPIILVGNKKD 474
P P+ILVG D
Sbjct: 460 KAPGSPVILVGTNAD 474
>SB_11841| Best HMM Match : Ras (HMM E-Value=0)
Length = 523
Score = 42.7 bits (96), Expect = 3e-04
Identities = 26/81 (32%), Positives = 44/81 (54%), Gaps = 2/81 (2%)
Frame = +1
Query: 289 DTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHF--CPNVPIILVG 462
DTAGQE+Y +R + L F+V++ S E+I ++ ++K VP++LVG
Sbjct: 283 DTAGQEEYSAMRDQYMRTGEGFLCVFAVNNSKSFEDI-NQYREQIKRVKDAEEVPMVLVG 341
Query: 463 NKKDLRNDPATINELPK*SKS 525
NK DL + ++ + +KS
Sbjct: 342 NKCDLPQRTVSTSDAQELAKS 362
>SB_52002| Best HMM Match : Ras (HMM E-Value=2.3e-19)
Length = 351
Score = 42.3 bits (95), Expect = 5e-04
Identities = 23/67 (34%), Positives = 35/67 (52%)
Frame = +1
Query: 277 LALWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIIL 456
L + DTAG + ++ L+ + D ++ +SVD SL+ E V VP++L
Sbjct: 158 LEIMDTAGSYPFPAMKKLTIQNADAFVLVYSVDEKASLQEALELQREIVYIKGKTVPMVL 217
Query: 457 VGNKKDL 477
VGNK DL
Sbjct: 218 VGNKTDL 224
Score = 33.1 bits (72), Expect = 0.28
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = +2
Query: 134 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENY 241
++V++G G GKT L+ F F E Y PTV + Y
Sbjct: 109 RVVVLGSGGVGKTSLVKRFISGTFSEQYTPTVGDLY 144
>SB_2885| Best HMM Match : Ras (HMM E-Value=0.0059)
Length = 141
Score = 41.9 bits (94), Expect = 6e-04
Identities = 16/28 (57%), Positives = 19/28 (67%)
Frame = +1
Query: 409 WTPEVKHFCPNVPIILVGNKKDLRNDPA 492
W PE+K CP VP +L+G K DLR D A
Sbjct: 1 WAPELKEACPGVPYLLIGCKNDLRTDSA 28
Score = 34.7 bits (76), Expect = 0.093
Identities = 16/42 (38%), Positives = 23/42 (54%)
Frame = +2
Query: 548 AMAEKINAFAYLECSAKSKEGVREVFETATRAALQVKKKKKT 673
A A+ I A Y+EC AK + ++EVF+ A A L + T
Sbjct: 53 ATAQSIGARQYVECCAKMRWNIKEVFQQAAEAILSKEDSNNT 94
>SB_41076| Best HMM Match : Ras (HMM E-Value=1.90016e-42)
Length = 704
Score = 41.5 bits (93), Expect = 8e-04
Identities = 23/81 (28%), Positives = 41/81 (50%), Gaps = 3/81 (3%)
Frame = +1
Query: 259 DGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFC- 435
D K+++L + DTAGQE Y + P + + + F + + + +W +
Sbjct: 397 DNKKIKLTIGDTAGQERYFSILPAYFRGVQGVFLVFDITVEITFLQL-HRWIDLARTTSG 455
Query: 436 --PNVPIILVGNKKDLRNDPA 492
N+ +ILVGNKKD+ ++ A
Sbjct: 456 ADSNIQLILVGNKKDMEDNRA 476
>SB_3743| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 365
Score = 41.5 bits (93), Expect = 8e-04
Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Frame = +1
Query: 256 VDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVK-HF 432
+D +V L +WDTAGQE + L D++ L+ F + + S E++ + W V+
Sbjct: 207 LDDFEVRLQIWDTAGQERFRCLIHSYIRDSEAALIVFDITNYTSFESVGD-WVKMVRDER 265
Query: 433 CPNVPIILVGNKKD 474
II+VGNK D
Sbjct: 266 GEKAVIIIVGNKMD 279
Score = 28.7 bits (61), Expect = 6.1
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +2
Query: 134 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTV 229
K+V +GD GK+ L F D F E Y PT+
Sbjct: 165 KIVFLGDQGVGKSSLAGRFIYDIFEEKYQPTI 196
>SB_34767| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 216
Score = 40.7 bits (91), Expect = 0.001
Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 5/78 (6%)
Frame = +1
Query: 271 VELALWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVK-----HFC 435
+ L +W AGQE + + + Y D ++ F ++ +L+ KW ++ H
Sbjct: 68 IRLQIWLIAGQERFSSMTRVYYKGADACVVLFDLERQTTLDG-AIKWKKDLDSKYKLHSR 126
Query: 436 PNVPIILVGNKKDLRNDP 489
VP ILVGNK DL + P
Sbjct: 127 KPVPCILVGNKSDLPDRP 144
>SB_27557| Best HMM Match : Ras (HMM E-Value=0)
Length = 184
Score = 40.7 bits (91), Expect = 0.001
Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Frame = +1
Query: 268 QVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVP 447
+++L +WDTAGQE + + Y +T L+ + + + DS N+ + W E K
Sbjct: 62 RIKLQIWDTAGQERFRSITYSYYRNTVGCLIIYDITNRDSFVNVMD-WYKEAKQCVEEAE 120
Query: 448 II--LVGNKKD 474
++ LVG+K D
Sbjct: 121 VVFMLVGHKID 131
Score = 29.9 bits (64), Expect = 2.6
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = +2
Query: 134 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTV 229
+++++GD GK+ LL F++ QF E PTV
Sbjct: 15 RIILIGDSTVGKSSLLRQFTEGQFFENSDPTV 46
>SB_17192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 37
Score = 39.9 bits (89), Expect = 0.002
Identities = 15/35 (42%), Positives = 25/35 (71%)
Frame = +1
Query: 304 EDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEK 408
E+Y+ +R Y DTDV L+CF + +P SL+++ +K
Sbjct: 3 ENYESIRRQMYLDTDVFLVCFDIGNPSSLQSVIDK 37
>SB_6223| Best HMM Match : Ras (HMM E-Value=0)
Length = 1665
Score = 38.7 bits (86), Expect = 0.006
Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
Frame = +1
Query: 256 VDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVK-HF 432
+D + L + DTAGQE++ +R + L+ FSV S E I + + ++
Sbjct: 54 IDERVAHLDILDTAGQEEFSAMREQYMRSGEGFLLVFSVTDRSSFEEINKFYNQILRVKD 113
Query: 433 CPNVPIILVGNKKDL 477
P+I+ GNK DL
Sbjct: 114 RTEFPMIICGNKSDL 128
Score = 35.9 bits (79), Expect = 0.040
Identities = 16/36 (44%), Positives = 22/36 (61%)
Frame = +2
Query: 134 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENY 241
KLV+VG G GK+ L I F + F Y PT+ ++Y
Sbjct: 13 KLVVVGGGGVGKSALTIQFIQSHFVSDYDPTIEDSY 48
>SB_2281| Best HMM Match : Ras (HMM E-Value=3.4e-06)
Length = 138
Score = 38.7 bits (86), Expect = 0.006
Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 5/74 (6%)
Frame = +1
Query: 262 GKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDS---LENIPEKWTPEVK-- 426
GK ++ + D+AGQE+Y R S D L+ F+++S S L+++ K E K
Sbjct: 20 GKLYDIEVVDSAGQEEYTSFRDSSLATGDAFLVLFAINSASSWNELKDLRGKIIREHKES 79
Query: 427 HFCPNVPIILVGNK 468
+ +P+++VGNK
Sbjct: 80 NTTCTIPMVIVGNK 93
>SB_45519| Best HMM Match : RNB (HMM E-Value=1.6e-35)
Length = 2748
Score = 38.7 bits (86), Expect = 0.006
Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 5/74 (6%)
Frame = +1
Query: 262 GKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDS---LENIPEK--WTPEVK 426
GK ++ + DTAGQE+Y R S D L+ F+++S S L+++ K E
Sbjct: 2630 GKLYDIEVVDTAGQEEYTSFRDSSLATGDAFLVLFAINSASSWNELKDLRGKIIREHEES 2689
Query: 427 HFCPNVPIILVGNK 468
+ +P+++VGNK
Sbjct: 2690 NTTCTIPMVIVGNK 2703
Score = 28.7 bits (61), Expect = 6.1
Identities = 14/45 (31%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = +2
Query: 134 KLVIVGDGACGKTCLLIVFSKDQFPEV-YVPTVFENYVADIEWME 265
+L +VG G GK+ + I + K++F E+ Y +++ V D E
Sbjct: 2600 RLCVVGSGGVGKSSVTIRYLKNEFTEIDYCGKLYDIEVVDTAGQE 2644
>SB_288| Best HMM Match : Ras (HMM E-Value=1.5e-11)
Length = 220
Score = 38.7 bits (86), Expect = 0.006
Identities = 26/82 (31%), Positives = 39/82 (47%), Gaps = 6/82 (7%)
Frame = +1
Query: 247 RHRVDGKQVELALWDTAGQEDY-----DRLRPLSYPDTDVILMCFSVDSPDSLENIPEKW 411
R + GK V L + DT G+ + PL Y ++ F V S E +P W
Sbjct: 9 RLELRGKTVHLHIVDTPGESRSVFHLAESTVPLIYRALSGAVIVFDVTDRKSFERVPT-W 67
Query: 412 TPEVKHFCPN-VPIILVGNKKD 474
+V+ C + +P++LVGNK D
Sbjct: 68 LDKVQEHCGHEIPVVLVGNKTD 89
>SB_8315| Best HMM Match : Ras (HMM E-Value=0)
Length = 565
Score = 38.3 bits (85), Expect = 0.008
Identities = 22/65 (33%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Frame = +1
Query: 262 GKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVK-H-FC 435
G+++ L LWDTAGQE + L + D L+ F + S NI W +++ H +C
Sbjct: 163 GQRIHLQLWDTAGQERFRSLTTAFFRDAMGFLLVFDLTHEQSFVNI-RNWLSQLQTHAYC 221
Query: 436 PNVPI 450
N I
Sbjct: 222 ENPDI 226
Score = 29.1 bits (62), Expect = 4.6
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +2
Query: 134 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTV 229
K + +GD GKT LL ++ F +VPT+
Sbjct: 108 KFLALGDSGVGKTSLLYQYTDSHFNPRFVPTI 139
>SB_53183| Best HMM Match : Ras (HMM E-Value=0)
Length = 834
Score = 37.9 bits (84), Expect = 0.010
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = +2
Query: 134 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTV 229
KL+++GD GKTC+L FS D F ++ T+
Sbjct: 11 KLLLIGDSGVGKTCILFRFSDDAFNTTFISTI 42
>SB_47462| Best HMM Match : Ras (HMM E-Value=0)
Length = 385
Score = 37.9 bits (84), Expect = 0.010
Identities = 17/41 (41%), Positives = 25/41 (60%)
Frame = +2
Query: 134 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIE 256
K+V++G G GK+ L + F QF E Y PT+ + Y +IE
Sbjct: 5 KVVVLGSGGVGKSALTVQFVTGQFVEKYDPTIEDFYRKEIE 45
Score = 36.3 bits (80), Expect = 0.030
Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Frame = +1
Query: 256 VDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVK-HF 432
VD L + DTAG E + +R L + L+ +S+ + + ++ ++
Sbjct: 46 VDNNPSILEILDTAGTEQFASMRDLYIKNGQGFLLVYSLINRQTFADLKPMRAQILRVKG 105
Query: 433 CPNVPIILVGNKKDLRND 486
NVPI+LVGNK D+ ++
Sbjct: 106 SENVPIVLVGNKSDIYDE 123
>SB_8803| Best HMM Match : Ras (HMM E-Value=7.9e-30)
Length = 517
Score = 37.5 bits (83), Expect = 0.013
Identities = 26/81 (32%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Frame = +1
Query: 247 RHRVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVK 426
R R K E W+ AGQE + + Y +++ + + +S N+ KW EV+
Sbjct: 362 RSRFQNKNDESG-WE-AGQERFRTITSSYYRGAHGVMIVYDITKRESYNNL-HKWLMEVE 418
Query: 427 HFCPN-VPIILVGNKKDLRND 486
+ V +ILVGNK DL D
Sbjct: 419 TYASEGVHMILVGNKIDLDTD 439
>SB_57342| Best HMM Match : Arf (HMM E-Value=0)
Length = 457
Score = 36.7 bits (81), Expect = 0.023
Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Frame = +1
Query: 265 KQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDS--LENIPEKWTPEVKHFCP 438
K + ++WD GQ+ RL + + I+ F VDS D + + E+ T ++H
Sbjct: 152 KNITFSVWDIGGQDKIRRLWRHYFQGAEGII--FVVDSADKERIFEVREELTRVLQHSEL 209
Query: 439 N-VPIILVGNKKDL 477
N VP+++V NK+DL
Sbjct: 210 NGVPVVVVANKQDL 223
>SB_37042| Best HMM Match : Arf (HMM E-Value=0)
Length = 188
Score = 35.9 bits (79), Expect = 0.040
Identities = 36/103 (34%), Positives = 51/103 (49%), Gaps = 9/103 (8%)
Frame = +1
Query: 265 KQVELALWDTAGQEDYDRLRPL---SYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFC 435
K V L +WD GQ D++RPL + T+ +L F VDS D L +PE E H
Sbjct: 62 KNVTLTIWDVGGQ---DKIRPLWRHYFQGTEGLL--FVVDSSDVLR-MPE--AKEELHGV 113
Query: 436 ------PNVPIILVGNKKDLRNDPATINELPK*SKSL*NRRRP 546
+VP+++V NK+DL N E+ K L ++R P
Sbjct: 114 LDSDEFRDVPVVVVANKQDLPN-ALKAGEMAKHLGLLQHKRNP 155
>SB_1071| Best HMM Match : Ras (HMM E-Value=0)
Length = 228
Score = 35.1 bits (77), Expect = 0.070
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = +2
Query: 134 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENY 241
K+V++G G GK+ L + F QF E Y PT+ + Y
Sbjct: 5 KVVVLGSGGVGKSALTVQFVTGQFVEKYDPTIEDFY 40
Score = 31.5 bits (68), Expect = 0.86
Identities = 18/68 (26%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Frame = +1
Query: 286 WDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVK-HFCPNVPIILVG 462
+ TAG E + +R L + L+ +S+ + + ++ ++ NVPI+LVG
Sbjct: 40 YHTAGTEQFASMRDLYIKNGQGFLLVYSLINRQTFADLKPMRAQILRVKGSENVPIVLVG 99
Query: 463 NKKDLRND 486
NK D+ ++
Sbjct: 100 NKSDIYDE 107
>SB_24444| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 268
Score = 34.7 bits (76), Expect = 0.093
Identities = 17/37 (45%), Positives = 24/37 (64%)
Frame = +2
Query: 521 RACETAEGRAMAEKINAFAYLECSAKSKEGVREVFET 631
R E +EGR AE + F Y E SA++ +G+ EVF+T
Sbjct: 66 RLVEESEGRQWAEN-HKFCYFETSAQTGDGIPEVFQT 101
>SB_49252| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 384
Score = 34.7 bits (76), Expect = 0.093
Identities = 16/45 (35%), Positives = 27/45 (60%)
Frame = +1
Query: 277 LALWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKW 411
L L DT+G E+Y L + + D ++ F+++ P SL ++ EKW
Sbjct: 65 LYLLDTSGLEEYRELTKIYLKNLDCVVFTFALNDPHSLSSL-EKW 108
>SB_33691| Best HMM Match : Ras (HMM E-Value=2.8e-13)
Length = 270
Score = 34.3 bits (75), Expect = 0.12
Identities = 16/40 (40%), Positives = 24/40 (60%)
Frame = +2
Query: 134 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADI 253
K+ I+G G GKT LL F +F E +VPTV + ++ +
Sbjct: 14 KISILGAGGVGKTSLLKTFFGHKFSEKHVPTVDDYFIHSV 53
>SB_25972| Best HMM Match : MIF4G (HMM E-Value=4.9e-40)
Length = 1265
Score = 33.9 bits (74), Expect = 0.16
Identities = 17/44 (38%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Frame = +1
Query: 355 LMCFSVDSPDSLENIPEKWTPEVK-HFCPNVPIILVGNKKDLRN 483
L+ + + + EN+ E+W E++ H N+ I+LVGNK DLR+
Sbjct: 10 LLVYDIAKHLTYENV-ERWLKELRDHADSNIVIMLVGNKSDLRH 52
>SB_12762| Best HMM Match : Ras (HMM E-Value=2.2e-21)
Length = 242
Score = 33.9 bits (74), Expect = 0.16
Identities = 20/69 (28%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Frame = +1
Query: 274 ELALWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPN-VPI 450
EL + DT+G ++ +R + D ++ +S D P+S + ++ E+ N P
Sbjct: 77 ELQIIDTSGTYEFPAMRKVDIAKGDAFVLVYSQDHPESFTKL-NRYRSEILEGGKNRHPC 135
Query: 451 ILVGNKKDL 477
I+V NK DL
Sbjct: 136 IVVCNKNDL 144
Score = 28.3 bits (60), Expect = 8.0
Identities = 15/54 (27%), Positives = 26/54 (48%)
Frame = +2
Query: 92 SSSASSGPMAAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADI 253
SSS + R +V G + GKT L++ F F + Y PT+ + ++ +
Sbjct: 16 SSSPKDSETSLRRFTIVFFGASSVGKTSLILRFLGYAFNDDYSPTIEDFFIKHV 69
>SB_43575| Best HMM Match : Sina (HMM E-Value=0)
Length = 432
Score = 33.9 bits (74), Expect = 0.16
Identities = 18/66 (27%), Positives = 32/66 (48%)
Frame = +1
Query: 289 DTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILVGNK 468
DTAG+E Y L ++ + + SL+ + ++ ++ PN +++VG K
Sbjct: 278 DTAGEEKYAGLSSFYCRGASAAIVAYDITKESSLKVLNDRHLHLLQAAEPNCLVVIVGCK 337
Query: 469 KDLRND 486
KDL D
Sbjct: 338 KDLVTD 343
>SB_22243| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 57
Score = 33.9 bits (74), Expect = 0.16
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = +1
Query: 259 DGKQVELALWDTAGQEDYDRLRPLSY 336
+G+ + L LWDTAGQE++D + Y
Sbjct: 30 NGEDIRLMLWDTAGQEEFDAITKAYY 55
>SB_33745| Best HMM Match : Ras (HMM E-Value=2.5e-21)
Length = 115
Score = 33.5 bits (73), Expect = 0.21
Identities = 13/47 (27%), Positives = 26/47 (55%)
Frame = +1
Query: 265 KQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPE 405
K+V+L +WDTAGQE Y + Y ++ + + + +S + + +
Sbjct: 68 KRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFQAVQD 114
Score = 33.1 bits (72), Expect = 0.28
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = +2
Query: 134 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTV 229
KL+I+G+ A GKT L ++ D F +V TV
Sbjct: 23 KLLIIGNSAVGKTSFLFRYADDSFTSAFVSTV 54
>SB_55155| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 487
Score = 33.1 bits (72), Expect = 0.28
Identities = 18/70 (25%), Positives = 31/70 (44%), Gaps = 1/70 (1%)
Frame = +1
Query: 271 VELALWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPN-VP 447
+ L +W+ G E Y P DT +++ PD + + + N VP
Sbjct: 213 LNLNIWEIGGDEKYRAYWPNFIADTQLLVYVVDSSDPDRFNESRDNLKSLLSNSLLNGVP 272
Query: 448 IILVGNKKDL 477
++LV +K+DL
Sbjct: 273 VLLVASKQDL 282
>SB_48157| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1306
Score = 33.1 bits (72), Expect = 0.28
Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Frame = +2
Query: 119 AAIRKKLVI--VGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEWMENKW 274
+A KKL I +G+G GK+ L+ F + F E YVPT+ E + + + W
Sbjct: 22 SAYLKKLTIAVLGEGRVGKSSLIRGFCGEGFQEEYVPTIEEFVSKHLLYNDQLW 75
>SB_35038| Best HMM Match : Ras (HMM E-Value=6.8e-13)
Length = 322
Score = 33.1 bits (72), Expect = 0.28
Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Frame = +2
Query: 116 MAAIRKKLVIVGDGACGKTCLLIVFSKD--QFPEVYVPTV 229
M +R K+++ GD GK+ L+ VF D +P+ Y TV
Sbjct: 1 MVVLRAKVLVTGDSCVGKSALVQVFQSDGTHYPKNYTQTV 40
>SB_38511| Best HMM Match : Ras (HMM E-Value=1.2e-22)
Length = 159
Score = 32.3 bits (70), Expect = 0.49
Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Frame = +1
Query: 301 QEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVK-HFCPNVPIILVGNKKDL 477
QE Y + Y ++ + + S N+ KW E++ H ++ IIL+GNK DL
Sbjct: 2 QERYRAITSAYYRGAMGAVLVYDIAKGTSFMNL-NKWVEELRQHASDDLSIILIGNKSDL 60
Query: 478 RN 483
++
Sbjct: 61 KH 62
>SB_5222| Best HMM Match : Ras (HMM E-Value=2.9e-09)
Length = 181
Score = 32.3 bits (70), Expect = 0.49
Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Frame = +1
Query: 301 QEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVK-HFCPNVPIILVGNKKDL 477
QE Y + Y ++ + + S N+ KW E++ H ++ IIL+GNK DL
Sbjct: 2 QERYRAITSAYYRGAMGAVLVYDIAKGTSFMNL-NKWVEELRQHASDDLSIILIGNKSDL 60
Query: 478 RN 483
++
Sbjct: 61 KH 62
>SB_45967| Best HMM Match : Ras (HMM E-Value=2.1e-07)
Length = 92
Score = 31.9 bits (69), Expect = 0.65
Identities = 13/43 (30%), Positives = 26/43 (60%)
Frame = +2
Query: 131 KKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEW 259
+K+ ++G + GK+ L I F + QF + Y PT+ + +I++
Sbjct: 7 RKIAVMGFRSVGKSSLTIQFVEGQFVDSYDPTIENTFTKNIKY 49
>SB_2235| Best HMM Match : Arf (HMM E-Value=3.1e-13)
Length = 334
Score = 31.9 bits (69), Expect = 0.65
Identities = 24/75 (32%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Frame = +1
Query: 265 KQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEV--KHFCP 438
K V A+WD GQ + LR + D D + + VDS D ++ + E + +
Sbjct: 16 KNVHFAVWDIGGQPN---LRKHYFTD-DKSGLIYVVDSTD-IQRLNEAQLLGILQEKVMV 70
Query: 439 NVPIILVGNKKDLRN 483
+VP+++V NK+DL N
Sbjct: 71 DVPVVVVANKQDLPN 85
>SB_38579| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 117
Score = 31.5 bits (68), Expect = 0.86
Identities = 18/42 (42%), Positives = 21/42 (50%)
Frame = +2
Query: 128 RKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADI 253
R KL +VGD GKT LL K EV +FE V D+
Sbjct: 61 RYKLSVVGDAESGKTSLLNALVKSDI-EVEETVIFEECVTDV 101
>SB_11310| Best HMM Match : Arf (HMM E-Value=0)
Length = 255
Score = 31.1 bits (67), Expect = 1.1
Identities = 17/81 (20%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
Frame = +1
Query: 256 VDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVK-HF 432
V+ K ++ +WD GQ+ L L + +T ++ + D ++ E+ +K
Sbjct: 129 VEYKNIKFTVWDIGGQDKIRLLWRLYFQETQGLIFVVDSNDRDRIQEAKEELFKLLKEEE 188
Query: 433 CPNVPIILVGNKKDLRNDPAT 495
++++ NK+DL + +T
Sbjct: 189 LKRAALLVLANKQDLPDSMST 209
>SB_40082| Best HMM Match : tRNA-synt_2 (HMM E-Value=8.1e-37)
Length = 479
Score = 31.1 bits (67), Expect = 1.1
Identities = 11/37 (29%), Positives = 19/37 (51%)
Frame = +1
Query: 250 HRVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILM 360
H++ G + + WD G DY+ +R Y T + L+
Sbjct: 5 HKIHGVEYRINFWDFGGDPDYNEIRSELYGQTQIDLI 41
>SB_24106| Best HMM Match : Ras (HMM E-Value=1e-35)
Length = 263
Score = 30.3 bits (65), Expect = 2.0
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +2
Query: 134 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENY 241
++ ++GD GKT LL+ F +F Y PT+ + Y
Sbjct: 7 RIALLGDEGVGKTALLVRFLCHRFLGEYDPTIEDKY 42
>SB_9680| Best HMM Match : Ank (HMM E-Value=4e-20)
Length = 1243
Score = 30.3 bits (65), Expect = 2.0
Identities = 18/72 (25%), Positives = 31/72 (43%), Gaps = 1/72 (1%)
Frame = +1
Query: 262 GKQVELALWDTAGQEDYDRLRPLSY-PDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCP 438
G + L+ WD AGQ Y + P T + + + + +EN+ W +K P
Sbjct: 724 GPTITLSTWDLAGQSVYYAAHQMFLTPSTLYLAVWNATLGEEGVENL-RSWLLNIKARAP 782
Query: 439 NVPIILVGNKKD 474
+I++G D
Sbjct: 783 YSDVIIIGTHLD 794
>SB_22497| Best HMM Match : Ras (HMM E-Value=7.7e-07)
Length = 769
Score = 30.3 bits (65), Expect = 2.0
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = +2
Query: 134 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPT 226
K+VI GD GKTC+ F E Y+PT
Sbjct: 227 KIVIKGDRNTGKTCMFHRLHGKPFNEQYIPT 257
>SB_7861| Best HMM Match : MMR_HSR1 (HMM E-Value=0.96)
Length = 244
Score = 29.9 bits (64), Expect = 2.6
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = +2
Query: 134 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYV 244
K+ I+G A GKT L+ K F ++PT+ ++Y+
Sbjct: 189 KMAILGGSAVGKTSLMRALFKKPFTNEHIPTI-DDYI 224
>SB_39092| Best HMM Match : Arf (HMM E-Value=8e-36)
Length = 260
Score = 29.5 bits (63), Expect = 3.5
Identities = 21/78 (26%), Positives = 33/78 (42%), Gaps = 1/78 (1%)
Frame = +1
Query: 253 RVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLE-NIPEKWTPEVKH 429
+V V + +WD GQ + + + I+ D LE + E K
Sbjct: 59 KVSKGNVTIKVWDIGGQPRFRSMWERYCRGVNCIVYMVDAADHDKLEASKNELHNLLEKP 118
Query: 430 FCPNVPIILVGNKKDLRN 483
+PI+++GNKKDL N
Sbjct: 119 QLAGIPILVLGNKKDLPN 136
>SB_12958| Best HMM Match : Ras (HMM E-Value=6e-13)
Length = 168
Score = 29.5 bits (63), Expect = 3.5
Identities = 24/81 (29%), Positives = 40/81 (49%), Gaps = 5/81 (6%)
Frame = +1
Query: 253 RVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPE--KWTPEVK 426
R+ +EL + DTAG + + + D ++ +S+ S E + K +V+
Sbjct: 9 RIGDSSMELDILDTAGNGEASYIH-----NGDGFVVVYSITDYYSYEMARQLVKLVTQVR 63
Query: 427 H---FCPNVPIILVGNKKDLR 480
C +PI+LVGNK+DLR
Sbjct: 64 KTDDIC-QIPIVLVGNKRDLR 83
>SB_45651| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 197
Score = 29.1 bits (62), Expect = 4.6
Identities = 16/83 (19%), Positives = 33/83 (39%)
Frame = +1
Query: 226 SV*ELRCRHRVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPE 405
S+ E R + ++ +WD GQEDY + ++ ++++ + E
Sbjct: 3 SMEEFRLKKDFLHREFIFKIWDFGGQEDYYATHQCFISTLSLYILVWNLEEGEEGAARLE 62
Query: 406 KWTPEVKHFCPNVPIILVGNKKD 474
W + P +++VG D
Sbjct: 63 GWLDTISARAPGSSLVIVGTHLD 85
>SB_53792| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 141
Score = 29.1 bits (62), Expect = 4.6
Identities = 14/46 (30%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Frame = +1
Query: 352 ILMCFSVDSPDSLENIPEKWTPEVK-HFCPNVPIILVGNKKDLRND 486
IL+ + + + DS ++I + W ++ + PNV +L+GNK D ++
Sbjct: 5 ILLVYDITTEDSFKHISQ-WLQNIEDNASPNVCKVLLGNKLDAEDE 49
>SB_8511| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 883
Score = 29.1 bits (62), Expect = 4.6
Identities = 28/110 (25%), Positives = 47/110 (42%)
Frame = -1
Query: 639 LVAVSNTSRTPSLLLAEHSRYANALIFSAIARPSAVSQALASFWKLVDGGGIVAEVFFVA 460
L+ V R P L EH IF+ I A ++ KLV+ G + + A
Sbjct: 341 LIRVMKQHRVP---LDEHQYRQMIRIFAFIGESRAAQFCFDNYKKLVEPNGTIFSLLISA 397
Query: 459 Y*NNRHVGAEVLYLRGPLLWDVLERIRRVHREAHEDHIRIWIRERPQPIV 310
Y +++ G + GPL + V + +R+ +A E + I P+ +V
Sbjct: 398 YGHSKDGG----FFSGPLKYKV-QFYKRIGLQAIEIYGENPIARNPRKVV 442
>SB_642| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2229
Score = 29.1 bits (62), Expect = 4.6
Identities = 16/83 (19%), Positives = 33/83 (39%)
Frame = +1
Query: 226 SV*ELRCRHRVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPE 405
S+ E R + ++ +WD GQEDY + ++ ++++ + E
Sbjct: 587 SMEEFRLKKDFLHREFIFKIWDFGGQEDYYATHQCFISTLSLYILVWNLEEGEEGAARLE 646
Query: 406 KWTPEVKHFCPNVPIILVGNKKD 474
W + P +++VG D
Sbjct: 647 GWLDTISARAPGSSLVIVGTHLD 669
>SB_33999| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 57
Score = 28.3 bits (60), Expect = 8.0
Identities = 15/47 (31%), Positives = 21/47 (44%)
Frame = +2
Query: 89 CSSSASSGPMAAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTV 229
C A M+ I K++IVGD GKT + + Y PT+
Sbjct: 9 CKCFAFGSTMSEILFKVLIVGDATVGKTSFVQRYVHGNTRREYKPTI 55
>SB_27990| Best HMM Match : DUF229 (HMM E-Value=6.5e-07)
Length = 887
Score = 28.3 bits (60), Expect = 8.0
Identities = 15/47 (31%), Positives = 23/47 (48%)
Frame = -1
Query: 708 SRQQHTYSREHLVFFFFLTCNAALVAVSNTSRTPSLLLAEHSRYANA 568
SR+ TYSR +FF L A+V + + P + HS+ A +
Sbjct: 20 SRRSSTYSRS--LFFVLLLVAVAIVVFFSQTSLPDFMKTSHSKIARS 64
>SB_56127| Best HMM Match : p450 (HMM E-Value=2.3e-07)
Length = 259
Score = 28.3 bits (60), Expect = 8.0
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = -3
Query: 370 PRST*GSHPYLDTRAAAADRNLLGQRY 290
P ++ G HPY +A RN +GQR+
Sbjct: 181 PENSEGRHPYAFVPFSAGSRNCIGQRF 207
>SB_42246| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 310
Score = 28.3 bits (60), Expect = 8.0
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +2
Query: 137 LVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENY 241
LV++G GK+ LL+ F +F Y PT+ Y
Sbjct: 130 LVLLGQAGVGKSALLVRFCTGRFIHEYDPTLEMTY 164
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,647,166
Number of Sequences: 59808
Number of extensions: 556802
Number of successful extensions: 1692
Number of sequences better than 10.0: 88
Number of HSP's better than 10.0 without gapping: 1486
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1676
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2323539746
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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