Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40062
         (828 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ438610-3|CAD27475.1|  190|Anopheles gambiae putative RHO small...   132   1e-32
Z69980-1|CAA93820.1|  134|Anopheles gambiae GTP-binding protein ...   106   7e-25
EF127647-1|ABL74413.1|  213|Anopheles gambiae Rab5 protein.            57   8e-10
AY028783-1|AAK32957.1|  499|Anopheles gambiae cytochrome P450 pr...    28   0.40 
AY183375-1|AAO24765.1|  679|Anopheles gambiae NADPH cytochrome P...    25   2.2  
U43500-1|AAA93303.1|  280|Anopheles gambiae a-CD36 protein.            25   2.8  
AY745212-1|AAU93479.1|  104|Anopheles gambiae cytochrome P450 pr...    24   6.6  
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.    24   6.6  
AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/T...    24   6.6  
AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/T...    24   6.6  

>AJ438610-3|CAD27475.1|  190|Anopheles gambiae putative RHO small
           GTPase protein.
          Length = 190

 Score =  132 bits (320), Expect = 1e-32
 Identities = 63/103 (61%), Positives = 69/103 (66%)
 Frame = +1

Query: 199 SIPGSIRADSV*ELRCRHRVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSVDS 378
           S PG     S         VDG QV L LWDTAGQEDYDRLRPLSYP TDV L+C+SV S
Sbjct: 30  SFPGEYVPTSFDNYSAPMVVDGVQVSLGLWDTAGQEDYDRLRPLSYPQTDVFLICYSVAS 89

Query: 379 PDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDPATINEL 507
           P S EN+  KW PE+KH CP+ PIILVG K DLR D  TI+ L
Sbjct: 90  PSSFENVTSKWYPEIKHHCPDAPIILVGTKIDLREDRETISLL 132



 Score = 55.2 bits (127), Expect = 2e-09
 Identities = 23/38 (60%), Positives = 28/38 (73%)
 Frame = +2

Query: 134 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVA 247
           K V+VGDG  GKTC+LI ++ D FP  YVPT F+NY A
Sbjct: 8   KCVVVGDGTVGKTCMLISYTTDSFPGEYVPTSFDNYSA 45



 Score = 37.9 bits (84), Expect = 4e-04
 Identities = 15/37 (40%), Positives = 26/37 (70%)
 Frame = +2

Query: 524 ACETAEGRAMAEKINAFAYLECSAKSKEGVREVFETA 634
           A +  +G+ +A KI A  Y+ECSA ++ G+++VF+ A
Sbjct: 139 ALKREQGQKLANKIRAVKYMECSALTQRGLKQVFDEA 175


>Z69980-1|CAA93820.1|  134|Anopheles gambiae GTP-binding protein
           protein.
          Length = 134

 Score =  106 bits (255), Expect = 7e-25
 Identities = 45/74 (60%), Positives = 56/74 (75%)
 Frame = +1

Query: 292 TAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKK 471
           +AGQEDYDRLRPLSYP TDV L+CFSV SP S EN+ EKW PE+ H C   P +LVG + 
Sbjct: 1   SAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCQKTPFLLVGTQI 60

Query: 472 DLRNDPATINELPK 513
           DLR++ +T+ +L K
Sbjct: 61  DLRDENSTLEKLAK 74



 Score = 44.0 bits (99), Expect = 6e-06
 Identities = 20/61 (32%), Positives = 38/61 (62%), Gaps = 1/61 (1%)
 Frame = +2

Query: 509 QNEARACETAEGRAMAEKINAFAYLECSAKSKEGVREVFETATRAALQ-VKKKKKTRCSL 685
           +N+ +     +G  +A+++ A  Y+ECSA +++G++ VF+ A  AAL+  +  KK +C  
Sbjct: 74  KNKQKPITLEQGEKLAKELKAVKYVECSALTQKGLKNVFDVAILAALEPPEPTKKRKCRF 133

Query: 686 L 688
           L
Sbjct: 134 L 134


>EF127647-1|ABL74413.1|  213|Anopheles gambiae Rab5 protein.
          Length = 213

 Score = 56.8 bits (131), Expect = 8e-10
 Identities = 27/77 (35%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
 Frame = +1

Query: 256 VDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEV-KHF 432
           +D   V+  +WDTAGQE Y  L P+ Y      ++ + + + DS     + W  E+ +  
Sbjct: 68  IDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDIQNSDSFAR-AKTWVKELQRQA 126

Query: 433 CPNVPIILVGNKKDLRN 483
            PN+ I L GNK DL N
Sbjct: 127 SPNIVIALAGNKADLAN 143



 Score = 31.1 bits (67), Expect = 0.043
 Identities = 14/32 (43%), Positives = 21/32 (65%)
 Frame = +2

Query: 134 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTV 229
           KLV++G+ A GK+ L++ F K QF E    T+
Sbjct: 26  KLVLLGESAVGKSSLVLRFVKGQFHEYQESTI 57


>AY028783-1|AAK32957.1|  499|Anopheles gambiae cytochrome P450
           protein.
          Length = 499

 Score = 27.9 bits (59), Expect = 0.40
 Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
 Frame = -3

Query: 352 SHPYLDTRAAAADRNLLGQRYP-TEPVPLVFHPLDVGNVILKHCRHVYFR 206
           SH  LD       ++  G  +  TEPV ++  P  + NV+++  RH Y R
Sbjct: 51  SHLMLDLYRELKGKHPFGGIFQFTEPVAMITDPEMIRNVLVRDFRHFYDR 100


>AY183375-1|AAO24765.1|  679|Anopheles gambiae NADPH cytochrome P450
           reductase protein.
          Length = 679

 Score = 25.4 bits (53), Expect = 2.2
 Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 4/42 (9%)
 Frame = +2

Query: 176 LLIVFSKDQFPEVYVPTVFENYVADIEWM---ENKWN-WLCG 289
           L + FS+DQ  +VYV  + E   +D+ W    ENK + ++CG
Sbjct: 592 LRVAFSRDQEKKVYVTHLLEQ-DSDLIWSVIGENKGHFYICG 632


>U43500-1|AAA93303.1|  280|Anopheles gambiae a-CD36 protein.
          Length = 280

 Score = 25.0 bits (52), Expect = 2.8
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = -2

Query: 302 WPAVSHRASSTCFPSTRCR 246
           WP ++  AS T FPS  CR
Sbjct: 183 WPPLAVSASITLFPSDICR 201


>AY745212-1|AAU93479.1|  104|Anopheles gambiae cytochrome P450
           protein.
          Length = 104

 Score = 23.8 bits (49), Expect = 6.6
 Identities = 10/35 (28%), Positives = 18/35 (51%)
 Frame = -3

Query: 370 PRST*GSHPYLDTRAAAADRNLLGQRYPTEPVPLV 266
           P  + G HP+     +   R+ +G+RY  + + LV
Sbjct: 64  PERSQGRHPHAYAPFSMGSRDCIGKRYAIQGMKLV 98


>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
          Length = 1229

 Score = 23.8 bits (49), Expect = 6.6
 Identities = 15/50 (30%), Positives = 22/50 (44%), Gaps = 4/50 (8%)
 Frame = +2

Query: 563  INAFAYLECSAKSKEGVREVFETATRAALQVK----KKKKTRCSLL*VCC 700
            + A   L+   +  +   E FE A + A + K    K K  RC+L   CC
Sbjct: 1025 MKAMQKLDRVTEKIQSTNEEFEAARKKAKKAKAAFEKVKNERCTLFTNCC 1074


>AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/Thr
           phosphatase protein.
          Length = 1977

 Score = 23.8 bits (49), Expect = 6.6
 Identities = 12/22 (54%), Positives = 13/22 (59%), Gaps = 1/22 (4%)
 Frame = -3

Query: 409 TSLGCSRANP-ASPPRST*GSH 347
           T   CS A+   SPPRS  GSH
Sbjct: 287 TQTDCSEASSDGSPPRSPEGSH 308


>AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/Thr
           phosphatase protein.
          Length = 1978

 Score = 23.8 bits (49), Expect = 6.6
 Identities = 12/22 (54%), Positives = 13/22 (59%), Gaps = 1/22 (4%)
 Frame = -3

Query: 409 TSLGCSRANP-ASPPRST*GSH 347
           T   CS A+   SPPRS  GSH
Sbjct: 287 TQTDCSEASSDGSPPRSPEGSH 308


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 894,628
Number of Sequences: 2352
Number of extensions: 18055
Number of successful extensions: 53
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 52
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 88150236
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)