Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40058
         (886 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    25   1.0  
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    25   1.0  
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    23   2.4  
AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    22   7.4  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    21   9.7  

>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 24.6 bits (51), Expect = 1.0
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = -2

Query: 627 NSLIAKHFLLFFIYLTMLLEDYL 559
           N +    FLLF +Y ++LL DY+
Sbjct: 275 NDIFGWSFLLFTLYSSLLLLDYV 297


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 24.6 bits (51), Expect = 1.0
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = -2

Query: 627 NSLIAKHFLLFFIYLTMLLEDYL 559
           N +    FLLF +Y ++LL DY+
Sbjct: 201 NDIFGWSFLLFTLYSSLLLLDYV 223


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 9/30 (30%), Positives = 18/30 (60%)
 Frame = -3

Query: 98  YLPTETFRTRSRGQHRRLCHCNLVFAVDFF 9
           YL  +T +++ R  HR L +  ++ + +FF
Sbjct: 147 YLILDTIKSKYRQMHRLLANYKVITSDEFF 176


>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = +2

Query: 641 KHVTKAM*TKLYTMLATYTRNGNYNI 718
           K +T ++ + LYT +A Y  N N+ I
Sbjct: 234 KCITSSL-SSLYTCIAGYEFNANFTI 258


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -2

Query: 306 YRIIIFCYLLHFASYTK 256
           + +I+F  LL+FAS  K
Sbjct: 48  FHLILFAVLLYFASLEK 64


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 210,619
Number of Sequences: 336
Number of extensions: 4742
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24513621
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)