Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40057
         (871 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q08UF6 Cluster: Putative uncharacterized protein; n=1; ...    37   0.58 
UniRef50_Q0LQ61 Cluster: Sua5/YciO/YrdC/YwlC; n=1; Herpetosiphon...    36   1.0  
UniRef50_Q91TI4 Cluster: T117; n=1; Tupaiid herpesvirus 1|Rep: T...    36   1.3  
UniRef50_Q1LQS6 Cluster: Outer membrane autotransporter barrel; ...    36   1.8  
UniRef50_A7RL85 Cluster: Predicted protein; n=1; Nematostella ve...    35   2.3  
UniRef50_A1R8E9 Cluster: GDSL-like Lipase/Acylhydrolase domain p...    34   4.1  
UniRef50_Q0BD04 Cluster: Putative uncharacterized protein precur...    33   7.1  
UniRef50_Q9A9B6 Cluster: Putative uncharacterized protein; n=1; ...    33   9.4  

>UniRef50_Q08UF6 Cluster: Putative uncharacterized protein; n=1;
           Stigmatella aurantiaca DW4/3-1|Rep: Putative
           uncharacterized protein - Stigmatella aurantiaca DW4/3-1
          Length = 504

 Score = 37.1 bits (82), Expect = 0.58
 Identities = 24/70 (34%), Positives = 35/70 (50%)
 Frame = +1

Query: 499 CLYTQSGAQIVLGSASGGAGTPRYVQVKTGGSGAVPVKLSAGNMPVKLAGNAVPLKIGTT 678
           CL + S +Q  +   +G  G  R +   T  +   PVK SAGN   +  GNAVPL +  T
Sbjct: 420 CLASSSRSQRNVAPQAGKGGR-REIATVTAEAEQTPVKPSAGNSTARATGNAVPLAL--T 476

Query: 679 NIQGKLTPNS 708
           ++     PN+
Sbjct: 477 SLPPPAHPNA 486


>UniRef50_Q0LQ61 Cluster: Sua5/YciO/YrdC/YwlC; n=1; Herpetosiphon
           aurantiacus ATCC 23779|Rep: Sua5/YciO/YrdC/YwlC -
           Herpetosiphon aurantiacus ATCC 23779
          Length = 207

 Score = 36.3 bits (80), Expect = 1.0
 Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
 Frame = +1

Query: 574 QVKTGGSGAVPVKL-SAGNMPVKLAGNAVPLKIGTTNIQGKLTPNSVQKVGQVTAGNLPL 750
           Q+ T G   + V++ + G +   +     P+   + N+ GK TPN+ Q V +  AG +PL
Sbjct: 106 QLLTAGKATIAVRVPNHGQLRNLIRQFGTPIAGTSANLHGKATPNTAQAVAEQLAGRVPL 165

Query: 751 KL 756
            L
Sbjct: 166 VL 167


>UniRef50_Q91TI4 Cluster: T117; n=1; Tupaiid herpesvirus 1|Rep: T117
           - Tupaiid herpesvirus 1 (strain 1) (TuHV-1) (Herpesvirus
           tupaia (strain1))
          Length = 393

 Score = 35.9 bits (79), Expect = 1.3
 Identities = 25/71 (35%), Positives = 29/71 (40%), Gaps = 3/71 (4%)
 Frame = -3

Query: 737 PAVTCPTFCTLLGVNFP*MLVVPIFSGTALP---ASLTGILPALNFTGTAPLPPVFTCT* 567
           P+ TCP   T     F   L  P F   A P   A  T + P   +  T P+PPV T T 
Sbjct: 5   PSATCPGVPT-----FTLTLTSPTFPTIAFPTVEAGETAVAPVTLYFSTEPIPPVCTTTP 59

Query: 566 RGVPAPPEADP 534
              P PP   P
Sbjct: 60  PPPPPPPPPPP 70


>UniRef50_Q1LQS6 Cluster: Outer membrane autotransporter barrel;
           n=1; Ralstonia metallidurans CH34|Rep: Outer membrane
           autotransporter barrel - Ralstonia metallidurans (strain
           CH34 / ATCC 43123 / DSM 2839)
          Length = 1741

 Score = 35.5 bits (78), Expect = 1.8
 Identities = 28/79 (35%), Positives = 37/79 (46%)
 Frame = +1

Query: 508 TQSGAQIVLGSASGGAGTPRYVQVKTGGSGAVPVKLSAGNMPVKLAGNAVPLKIGTTNIQ 687
           TQSGA  V GS +  AGT        G S   P+ +S G+  V++ G    L  GT  I 
Sbjct: 613 TQSGALSVAGSTTISAGTGAITLTDAGNSFQGPIAISGGS--VQIGGT---LAAGTGQIS 667

Query: 688 GKLTPNSVQKVGQVTAGNL 744
            +   +  Q  G +TAG L
Sbjct: 668 LQSLGDVRQTGGSLTAGTL 686


>UniRef50_A7RL85 Cluster: Predicted protein; n=1; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 326

 Score = 35.1 bits (77), Expect = 2.3
 Identities = 30/92 (32%), Positives = 41/92 (44%), Gaps = 2/92 (2%)
 Frame = +1

Query: 562 PRYVQVKTGGSGAVPVKLSAGNMPVKLAGNAVPLKIGTTNIQGKLTPNSVQKVGQVTAGN 741
           PR V  K      VP K+   N+P K+    VP K+   N+  K+ P +V    +V   N
Sbjct: 15  PRNVPTKVHPRN-VPTKVHPRNVPTKVLPRNVPTKVLPRNVPAKVHPRNVPT--KVHPRN 71

Query: 742 LPLKLWCGNV--KIWYE*CSCKNSRRNALYKV 831
           +P K+   NV  K+       K   RN L KV
Sbjct: 72  VPTKVHPRNVPTKVHPRNVPTKVHPRNVLTKV 103



 Score = 33.1 bits (72), Expect = 9.4
 Identities = 23/70 (32%), Positives = 33/70 (47%)
 Frame = +1

Query: 562 PRYVQVKTGGSGAVPVKLSAGNMPVKLAGNAVPLKIGTTNIQGKLTPNSVQKVGQVTAGN 741
           PR V  K      VP K+   N+P K+    VP K+   N+  K+ P +V    +V   N
Sbjct: 123 PRNVPTKVHPRN-VPTKVHPRNVPTKVHPRNVPTKVHPRNVPTKVHPRNVPT--KVHPRN 179

Query: 742 LPLKLWCGNV 771
           +P K+   NV
Sbjct: 180 VPTKVHPRNV 189



 Score = 33.1 bits (72), Expect = 9.4
 Identities = 23/70 (32%), Positives = 33/70 (47%)
 Frame = +1

Query: 562 PRYVQVKTGGSGAVPVKLSAGNMPVKLAGNAVPLKIGTTNIQGKLTPNSVQKVGQVTAGN 741
           PR V  K      VP K+   N+P K+    VP K+   N+  K+ P +V    +V   N
Sbjct: 150 PRNVPTKVHPRN-VPTKVHPRNVPTKVHPRNVPTKVHPRNVPTKVHPRNVPT--KVHPRN 206

Query: 742 LPLKLWCGNV 771
           +P K+   NV
Sbjct: 207 VPTKVHPRNV 216



 Score = 33.1 bits (72), Expect = 9.4
 Identities = 23/70 (32%), Positives = 33/70 (47%)
 Frame = +1

Query: 562 PRYVQVKTGGSGAVPVKLSAGNMPVKLAGNAVPLKIGTTNIQGKLTPNSVQKVGQVTAGN 741
           PR V  K      VP K+   N+P K+    VP K+   N+  K+ P +V    +V   N
Sbjct: 177 PRNVPTKVHPRN-VPTKVHPRNVPTKVHPRNVPTKVHPRNVPTKVHPRNVPT--KVHPRN 233

Query: 742 LPLKLWCGNV 771
           +P K+   NV
Sbjct: 234 VPTKVHPRNV 243



 Score = 33.1 bits (72), Expect = 9.4
 Identities = 23/70 (32%), Positives = 33/70 (47%)
 Frame = +1

Query: 562 PRYVQVKTGGSGAVPVKLSAGNMPVKLAGNAVPLKIGTTNIQGKLTPNSVQKVGQVTAGN 741
           PR V  K      VP K+   N+P K+    VP K+   N+  K+ P +V    +V   N
Sbjct: 204 PRNVPTKVHPRN-VPTKVHPRNVPTKVHPRNVPTKVHPRNVPTKVHPRNVPT--KVHPRN 260

Query: 742 LPLKLWCGNV 771
           +P K+   NV
Sbjct: 261 VPTKVHPRNV 270



 Score = 33.1 bits (72), Expect = 9.4
 Identities = 23/70 (32%), Positives = 33/70 (47%)
 Frame = +1

Query: 562 PRYVQVKTGGSGAVPVKLSAGNMPVKLAGNAVPLKIGTTNIQGKLTPNSVQKVGQVTAGN 741
           PR V  K      VP K+   N+P K+    VP K+   N+  K+ P +V    +V   N
Sbjct: 231 PRNVPTKVHPRN-VPTKVHPRNVPTKVHPRNVPTKVHPRNVPTKVHPRNVPT--KVHPRN 287

Query: 742 LPLKLWCGNV 771
           +P K+   NV
Sbjct: 288 VPTKVHPRNV 297



 Score = 33.1 bits (72), Expect = 9.4
 Identities = 23/70 (32%), Positives = 33/70 (47%)
 Frame = +1

Query: 562 PRYVQVKTGGSGAVPVKLSAGNMPVKLAGNAVPLKIGTTNIQGKLTPNSVQKVGQVTAGN 741
           PR V  K      VP K+   N+P K+    VP K+   N+  K+ P +V    +V   N
Sbjct: 258 PRNVPTKVHPRN-VPTKVHPRNVPTKVHPRNVPTKVHPRNVPTKVHPRNVPT--KVHPRN 314

Query: 742 LPLKLWCGNV 771
           +P K+   NV
Sbjct: 315 VPTKVHPRNV 324


>UniRef50_A1R8E9 Cluster: GDSL-like Lipase/Acylhydrolase domain
           protein; n=1; Arthrobacter aurescens TC1|Rep: GDSL-like
           Lipase/Acylhydrolase domain protein - Arthrobacter
           aurescens (strain TC1)
          Length = 331

 Score = 34.3 bits (75), Expect = 4.1
 Identities = 17/65 (26%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
 Frame = +1

Query: 454 CDKNRKWRLDTRNRTCLYTQSGAQIVLGSASGGAG-TPRYVQVKTGGSGAVPVKLSAGNM 630
           C  +  WR   RN   ++      I +G  S G G +P  +   +G +   P + SA + 
Sbjct: 32  CRTSAMWRTTMRNAPAVFRLLAPLIAIGVLSVGCGPSPAPISAPSGSTAPGPAQTSAADK 91

Query: 631 PVKLA 645
           P+++A
Sbjct: 92  PLRIA 96


>UniRef50_Q0BD04 Cluster: Putative uncharacterized protein
           precursor; n=1; Burkholderia ambifaria AMMD|Rep:
           Putative uncharacterized protein precursor -
           Burkholderia cepacia (strain ATCC 53795 / AMMD)
          Length = 397

 Score = 33.5 bits (73), Expect = 7.1
 Identities = 22/78 (28%), Positives = 32/78 (41%)
 Frame = +1

Query: 514 SGAQIVLGSASGGAGTPRYVQVKTGGSGAVPVKLSAGNMPVKLAGNAVPLKIGTTNIQGK 693
           +G  I+    S G      V     GSG V V  + GN+ V +A N + L          
Sbjct: 39  TGQAIISNGPSSGPAWSSIVDSVVAGSG-VAVSGATGNVTVSVATNGIALGQIAQQAANS 97

Query: 694 LTPNSVQKVGQVTAGNLP 747
           +  N+   +G VTA  +P
Sbjct: 98  VLANATSSMGNVTAFTMP 115


>UniRef50_Q9A9B6 Cluster: Putative uncharacterized protein; n=1;
           Caulobacter vibrioides|Rep: Putative uncharacterized
           protein - Caulobacter crescentus (Caulobacter
           vibrioides)
          Length = 482

 Score = 33.1 bits (72), Expect = 9.4
 Identities = 25/78 (32%), Positives = 34/78 (43%), Gaps = 2/78 (2%)
 Frame = +1

Query: 439 GDAARCDKNRKW--RLDTRNRTCLYTQSGAQIVLGSASGGAGTPRYVQVKTGGSGAVPVK 612
           G AA    NR    +LD R       Q+G +  LG+  GG    R V+   GG GAV + 
Sbjct: 235 GQAAVLQANRAGEDQLDARGAMLGQHQTG-RTALGALGGGQDPQRTVKGADGGHGAVEIV 293

Query: 613 LSAGNMPVKLAGNAVPLK 666
           L     P +  G+   L+
Sbjct: 294 LGQRRAPFQAGGHGRTLR 311


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 806,686,458
Number of Sequences: 1657284
Number of extensions: 15411728
Number of successful extensions: 46478
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 43592
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 46399
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 77472727479
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)