Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40057
         (871 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL445287-2|CAH71065.1|  698|Homo sapiens GLE1 RNA export mediato...    31   7.2  
AL445287-1|CAH71064.1|  659|Homo sapiens GLE1 RNA export mediato...    31   7.2  
AL356481-2|CAH71403.1|  698|Homo sapiens GLE1 RNA export mediato...    31   7.2  
AL356481-1|CAH71402.1|  659|Homo sapiens GLE1 RNA export mediato...    31   7.2  
AK222854-1|BAD96574.1|  698|Homo sapiens GLE1-like, RNA export m...    31   7.2  
AK222842-1|BAD96562.1|  659|Homo sapiens GLE1-like, RNA export m...    31   7.2  
AF058922-1|AAC25561.1|  659|Homo sapiens GLE1 protein.                 31   7.2  
M80783-1|AAA58385.1|  316|Homo sapiens B12 protein protein.            30   9.5  
CR456819-1|CAG33100.1|  316|Homo sapiens TNFAIP1 protein.              30   9.5  
BT020121-1|AAV38924.1|  316|Homo sapiens tumor necrosis factor, ...    30   9.5  
BC001949-1|AAH01949.1|  316|Homo sapiens tumor necrosis factor, ...    30   9.5  
BC001643-1|AAH01643.1|  316|Homo sapiens tumor necrosis factor, ...    30   9.5  
AY065346-1|AAL38649.1|  316|Homo sapiens tumor necrosis factor, ...    30   9.5  

>AL445287-2|CAH71065.1|  698|Homo sapiens GLE1 RNA export
           mediator-like (yeast) protein.
          Length = 698

 Score = 30.7 bits (66), Expect = 7.2
 Identities = 17/48 (35%), Positives = 27/48 (56%)
 Frame = +2

Query: 386 SPANPATPSSSQQIKVAAVTPQGVTRIVSGVSTPGTVRVSTHSLVHRL 529
           SPA+PATP+ ++    +  T   V +   G+   G VR+  + LVHR+
Sbjct: 96  SPASPATPNGTKGKDESQHTESMVLQSSRGIKVEGCVRM--YELVHRM 141


>AL445287-1|CAH71064.1|  659|Homo sapiens GLE1 RNA export
           mediator-like (yeast) protein.
          Length = 659

 Score = 30.7 bits (66), Expect = 7.2
 Identities = 17/48 (35%), Positives = 27/48 (56%)
 Frame = +2

Query: 386 SPANPATPSSSQQIKVAAVTPQGVTRIVSGVSTPGTVRVSTHSLVHRL 529
           SPA+PATP+ ++    +  T   V +   G+   G VR+  + LVHR+
Sbjct: 96  SPASPATPNGTKGKDESQHTESMVLQSSRGIKVEGCVRM--YELVHRM 141


>AL356481-2|CAH71403.1|  698|Homo sapiens GLE1 RNA export
           mediator-like (yeast) protein.
          Length = 698

 Score = 30.7 bits (66), Expect = 7.2
 Identities = 17/48 (35%), Positives = 27/48 (56%)
 Frame = +2

Query: 386 SPANPATPSSSQQIKVAAVTPQGVTRIVSGVSTPGTVRVSTHSLVHRL 529
           SPA+PATP+ ++    +  T   V +   G+   G VR+  + LVHR+
Sbjct: 96  SPASPATPNGTKGKDESQHTESMVLQSSRGIKVEGCVRM--YELVHRM 141


>AL356481-1|CAH71402.1|  659|Homo sapiens GLE1 RNA export
           mediator-like (yeast) protein.
          Length = 659

 Score = 30.7 bits (66), Expect = 7.2
 Identities = 17/48 (35%), Positives = 27/48 (56%)
 Frame = +2

Query: 386 SPANPATPSSSQQIKVAAVTPQGVTRIVSGVSTPGTVRVSTHSLVHRL 529
           SPA+PATP+ ++    +  T   V +   G+   G VR+  + LVHR+
Sbjct: 96  SPASPATPNGTKGKDESQHTESMVLQSSRGIKVEGCVRM--YELVHRM 141


>AK222854-1|BAD96574.1|  698|Homo sapiens GLE1-like, RNA export
           mediator isoform 1 variant protein.
          Length = 698

 Score = 30.7 bits (66), Expect = 7.2
 Identities = 17/48 (35%), Positives = 27/48 (56%)
 Frame = +2

Query: 386 SPANPATPSSSQQIKVAAVTPQGVTRIVSGVSTPGTVRVSTHSLVHRL 529
           SPA+PATP+ ++    +  T   V +   G+   G VR+  + LVHR+
Sbjct: 96  SPASPATPNGTKGKDESQHTESMVLQSSRGIKVEGCVRM--YELVHRM 141


>AK222842-1|BAD96562.1|  659|Homo sapiens GLE1-like, RNA export
           mediator isoform 2 variant protein.
          Length = 659

 Score = 30.7 bits (66), Expect = 7.2
 Identities = 17/48 (35%), Positives = 27/48 (56%)
 Frame = +2

Query: 386 SPANPATPSSSQQIKVAAVTPQGVTRIVSGVSTPGTVRVSTHSLVHRL 529
           SPA+PATP+ ++    +  T   V +   G+   G VR+  + LVHR+
Sbjct: 96  SPASPATPNGTKGKDESQHTESMVLQSSRGIKVEGCVRM--YELVHRM 141


>AF058922-1|AAC25561.1|  659|Homo sapiens GLE1 protein.
          Length = 659

 Score = 30.7 bits (66), Expect = 7.2
 Identities = 17/48 (35%), Positives = 27/48 (56%)
 Frame = +2

Query: 386 SPANPATPSSSQQIKVAAVTPQGVTRIVSGVSTPGTVRVSTHSLVHRL 529
           SPA+PATP+ ++    +  T   V +   G+   G VR+  + LVHR+
Sbjct: 96  SPASPATPNGTKGKDESQHTESMVLQSSRGIKVEGCVRM--YELVHRM 141


>M80783-1|AAA58385.1|  316|Homo sapiens B12 protein protein.
          Length = 316

 Score = 30.3 bits (65), Expect = 9.5
 Identities = 15/33 (45%), Positives = 18/33 (54%)
 Frame = +1

Query: 496 TCLYTQSGAQIVLGSASGGAGTPRYVQVKTGGS 594
           TCL   SGA+  L    GG    +YVQ+  GGS
Sbjct: 5   TCLCPASGAKPKLSGFKGGGLGNKYVQLNVGGS 37


>CR456819-1|CAG33100.1|  316|Homo sapiens TNFAIP1 protein.
          Length = 316

 Score = 30.3 bits (65), Expect = 9.5
 Identities = 15/33 (45%), Positives = 18/33 (54%)
 Frame = +1

Query: 496 TCLYTQSGAQIVLGSASGGAGTPRYVQVKTGGS 594
           TCL   SGA+  L    GG    +YVQ+  GGS
Sbjct: 5   TCLCPASGAKPKLSGFKGGGLGNKYVQLNVGGS 37


>BT020121-1|AAV38924.1|  316|Homo sapiens tumor necrosis factor,
           alpha-induced protein 1 (endothelial) protein.
          Length = 316

 Score = 30.3 bits (65), Expect = 9.5
 Identities = 15/33 (45%), Positives = 18/33 (54%)
 Frame = +1

Query: 496 TCLYTQSGAQIVLGSASGGAGTPRYVQVKTGGS 594
           TCL   SGA+  L    GG    +YVQ+  GGS
Sbjct: 5   TCLCPASGAKPKLSGFKGGGLGNKYVQLNVGGS 37


>BC001949-1|AAH01949.1|  316|Homo sapiens tumor necrosis factor,
           alpha-induced protein 1 (endothelial) protein.
          Length = 316

 Score = 30.3 bits (65), Expect = 9.5
 Identities = 15/33 (45%), Positives = 18/33 (54%)
 Frame = +1

Query: 496 TCLYTQSGAQIVLGSASGGAGTPRYVQVKTGGS 594
           TCL   SGA+  L    GG    +YVQ+  GGS
Sbjct: 5   TCLCPASGAKPKLSGFKGGGLGNKYVQLNVGGS 37


>BC001643-1|AAH01643.1|  316|Homo sapiens tumor necrosis factor,
           alpha-induced protein 1 (endothelial) protein.
          Length = 316

 Score = 30.3 bits (65), Expect = 9.5
 Identities = 15/33 (45%), Positives = 18/33 (54%)
 Frame = +1

Query: 496 TCLYTQSGAQIVLGSASGGAGTPRYVQVKTGGS 594
           TCL   SGA+  L    GG    +YVQ+  GGS
Sbjct: 5   TCLCPASGAKPKLSGFKGGGLGNKYVQLNVGGS 37


>AY065346-1|AAL38649.1|  316|Homo sapiens tumor necrosis factor,
           alpha-induced protein 1 (endothelial) protein.
          Length = 316

 Score = 30.3 bits (65), Expect = 9.5
 Identities = 15/33 (45%), Positives = 18/33 (54%)
 Frame = +1

Query: 496 TCLYTQSGAQIVLGSASGGAGTPRYVQVKTGGS 594
           TCL   SGA+  L    GG    +YVQ+  GGS
Sbjct: 5   TCLCPASGAKPKLSGFKGGGLGNKYVQLNVGGS 37


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 120,758,225
Number of Sequences: 237096
Number of extensions: 2502173
Number of successful extensions: 6250
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 5748
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6247
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11048563978
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)